data_3ETE # _model_server_result.job_id T6v8ipvnVidf-69c7U8dDQ _model_server_result.datetime_utc '2024-11-24 19:20:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ete # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":552}' # _entry.id 3ETE # _exptl.entry_id 3ETE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.904 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2,2'-methanediylbis(3,4,6-trichlorophenol)" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.344 _cell.angle_gamma 90 _cell.entry_id 3ETE _cell.length_a 123.374 _cell.length_b 101.577 _cell.length_c 166.873 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ETE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 N N N ? 5 R N N ? 5 S N N ? 5 W N N ? 5 DA N N # _chem_comp.formula 'C13 H6 Cl6 O2' _chem_comp.formula_weight 406.904 _chem_comp.id H3P _chem_comp.mon_nstd_flag . _chem_comp.name "2,2'-methanediylbis(3,4,6-trichlorophenol)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAA CAP H3P sing 179 n n OAA HOAA H3P sing 180 n n CAL CAP H3P doub 181 n y CAP CAT H3P sing 182 n y CLAC CAL H3P sing 183 n n CAL CAI H3P sing 184 n y CAI CAN H3P doub 185 n y CAI HAI H3P sing 186 n n CAN CAR H3P sing 187 n y CAN CLAE H3P sing 188 n n CAT CAR H3P doub 189 n y CAR CLAG H3P sing 190 n n CAT CAK H3P sing 191 n n CAK CAU H3P sing 192 n n CAK HAK H3P sing 193 n n CAK HAKA H3P sing 194 n n CAQ CAU H3P doub 195 n y CAU CAS H3P sing 196 n y CAS CAO H3P doub 197 n y CAS CLAH H3P sing 198 n n CAJ CAO H3P sing 199 n y CAO CLAF H3P sing 200 n n CAM CAJ H3P doub 201 n y CAJ HAJ H3P sing 202 n n CLAD CAM H3P sing 203 n n CAQ CAM H3P sing 204 n y OAB CAQ H3P sing 205 n n OAB HOAB H3P sing 206 n n # _atom_sites.entry_id 3ETE _atom_sites.fract_transf_matrix[1][1] 0.008105 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001774 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GLU A 1 550 550 GLU GLU . H 3 NDP A 1 551 551 NDP NDP . I 4 GTP A 1 553 553 GTP GTP . J 5 H3P A 1 552 1 H3P H3P . K 2 GLU B 1 550 550 GLU GLU . L 3 NDP B 1 551 551 NDP NDP . M 4 GTP B 1 553 553 GTP GTP . N 5 H3P B 1 552 1 H3P H3P . O 2 GLU C 1 550 550 GLU GLU . P 3 NDP C 1 551 551 NDP NDP . Q 4 GTP C 1 553 553 GTP GTP . R 5 H3P C 1 552 1 H3P H3P . S 5 H3P C 1 554 1 H3P H3P . T 2 GLU D 1 550 550 GLU GLU . U 3 NDP D 1 551 551 NDP NDP . V 4 GTP D 1 553 553 GTP GTP . W 5 H3P D 1 552 1 H3P H3P . X 2 GLU E 1 550 550 GLU GLU . Y 3 NDP E 1 551 551 NDP NDP . Z 4 GTP E 1 553 553 GTP GTP . AA 2 GLU F 1 550 550 GLU GLU . BA 3 NDP F 1 551 551 NDP NDP . CA 4 GTP F 1 553 553 GTP GTP . DA 5 H3P F 1 552 1 H3P H3P . EA 6 HOH A 1 554 3 HOH TIP . EA 6 HOH A 2 555 9 HOH TIP . EA 6 HOH A 3 556 13 HOH TIP . EA 6 HOH A 4 557 35 HOH TIP . EA 6 HOH A 5 558 36 HOH TIP . EA 6 HOH A 6 559 38 HOH TIP . EA 6 HOH A 7 560 42 HOH TIP . EA 6 HOH A 8 561 43 HOH TIP . EA 6 HOH A 9 562 57 HOH TIP . EA 6 HOH A 10 563 61 HOH TIP . EA 6 HOH A 11 564 67 HOH TIP . EA 6 HOH A 12 565 70 HOH TIP . EA 6 HOH A 13 566 72 HOH TIP . EA 6 HOH A 14 567 73 HOH TIP . EA 6 HOH A 15 568 86 HOH TIP . EA 6 HOH A 16 569 92 HOH TIP . EA 6 HOH A 17 570 107 HOH TIP . EA 6 HOH A 18 571 110 HOH TIP . EA 6 HOH A 19 572 112 HOH TIP . EA 6 HOH A 20 573 120 HOH TIP . EA 6 HOH A 21 574 128 HOH TIP . EA 6 HOH A 22 575 135 HOH TIP . EA 6 HOH A 23 576 138 HOH TIP . EA 6 HOH A 24 577 143 HOH TIP . EA 6 HOH A 25 578 158 HOH TIP . EA 6 HOH A 26 579 159 HOH TIP . EA 6 HOH A 27 580 163 HOH TIP . EA 6 HOH A 28 581 169 HOH TIP . EA 6 HOH A 29 582 173 HOH TIP . EA 6 HOH A 30 583 184 HOH TIP . EA 6 HOH A 31 584 192 HOH TIP . EA 6 HOH A 32 585 206 HOH TIP . EA 6 HOH A 33 586 209 HOH TIP . EA 6 HOH A 34 587 210 HOH TIP . FA 6 HOH B 1 554 1 HOH TIP . FA 6 HOH B 2 555 7 HOH TIP . FA 6 HOH B 3 556 20 HOH TIP . FA 6 HOH B 4 557 24 HOH TIP . FA 6 HOH B 5 558 29 HOH TIP . FA 6 HOH B 6 559 31 HOH TIP . FA 6 HOH B 7 560 46 HOH TIP . FA 6 HOH B 8 561 50 HOH TIP . FA 6 HOH B 9 562 77 HOH TIP . FA 6 HOH B 10 563 78 HOH TIP . FA 6 HOH B 11 564 85 HOH TIP . FA 6 HOH B 12 565 89 HOH TIP . FA 6 HOH B 13 566 90 HOH TIP . FA 6 HOH B 14 567 102 HOH TIP . FA 6 HOH B 15 568 105 HOH TIP . FA 6 HOH B 16 569 111 HOH TIP . FA 6 HOH B 17 570 121 HOH TIP . FA 6 HOH B 18 571 130 HOH TIP . FA 6 HOH B 19 572 132 HOH TIP . FA 6 HOH B 20 573 139 HOH TIP . FA 6 HOH B 21 574 142 HOH TIP . FA 6 HOH B 22 575 162 HOH TIP . FA 6 HOH B 23 576 170 HOH TIP . FA 6 HOH B 24 577 176 HOH TIP . FA 6 HOH B 25 578 182 HOH TIP . FA 6 HOH B 26 579 183 HOH TIP . FA 6 HOH B 27 580 190 HOH TIP . FA 6 HOH B 28 581 191 HOH TIP . FA 6 HOH B 29 582 193 HOH TIP . FA 6 HOH B 30 583 198 HOH TIP . FA 6 HOH B 31 584 200 HOH TIP . FA 6 HOH B 32 585 208 HOH TIP . FA 6 HOH B 33 586 214 HOH TIP . FA 6 HOH B 34 587 219 HOH TIP . GA 6 HOH C 1 555 2 HOH TIP . GA 6 HOH C 2 556 5 HOH TIP . GA 6 HOH C 3 557 8 HOH TIP . GA 6 HOH C 4 558 17 HOH TIP . GA 6 HOH C 5 559 18 HOH TIP . GA 6 HOH C 6 560 21 HOH TIP . GA 6 HOH C 7 561 27 HOH TIP . GA 6 HOH C 8 562 28 HOH TIP . GA 6 HOH C 9 563 32 HOH TIP . GA 6 HOH C 10 564 34 HOH TIP . GA 6 HOH C 11 565 37 HOH TIP . GA 6 HOH C 12 566 39 HOH TIP . GA 6 HOH C 13 567 44 HOH TIP . GA 6 HOH C 14 568 55 HOH TIP . GA 6 HOH C 15 569 59 HOH TIP . GA 6 HOH C 16 570 62 HOH TIP . GA 6 HOH C 17 571 65 HOH TIP . GA 6 HOH C 18 572 74 HOH TIP . GA 6 HOH C 19 573 80 HOH TIP . GA 6 HOH C 20 574 83 HOH TIP . GA 6 HOH C 21 575 84 HOH TIP . GA 6 HOH C 22 576 91 HOH TIP . GA 6 HOH C 23 577 96 HOH TIP . GA 6 HOH C 24 578 97 HOH TIP . GA 6 HOH C 25 579 98 HOH TIP . GA 6 HOH C 26 580 106 HOH TIP . GA 6 HOH C 27 581 116 HOH TIP . GA 6 HOH C 28 582 117 HOH TIP . GA 6 HOH C 29 583 119 HOH TIP . GA 6 HOH C 30 584 131 HOH TIP . GA 6 HOH C 31 585 133 HOH TIP . GA 6 HOH C 32 586 134 HOH TIP . GA 6 HOH C 33 587 140 HOH TIP . GA 6 HOH C 34 588 141 HOH TIP . GA 6 HOH C 35 589 147 HOH TIP . GA 6 HOH C 36 590 149 HOH TIP . GA 6 HOH C 37 591 155 HOH TIP . GA 6 HOH C 38 592 156 HOH TIP . GA 6 HOH C 39 593 166 HOH TIP . GA 6 HOH C 40 594 167 HOH TIP . GA 6 HOH C 41 595 171 HOH TIP . GA 6 HOH C 42 596 174 HOH TIP . GA 6 HOH C 43 597 178 HOH TIP . GA 6 HOH C 44 598 180 HOH TIP . GA 6 HOH C 45 599 187 HOH TIP . GA 6 HOH C 46 600 195 HOH TIP . GA 6 HOH C 47 601 197 HOH TIP . GA 6 HOH C 48 602 203 HOH TIP . GA 6 HOH C 49 603 211 HOH TIP . HA 6 HOH D 1 554 4 HOH TIP . HA 6 HOH D 2 555 6 HOH TIP . HA 6 HOH D 3 556 12 HOH TIP . HA 6 HOH D 4 557 15 HOH TIP . HA 6 HOH D 5 558 16 HOH TIP . HA 6 HOH D 6 559 22 HOH TIP . HA 6 HOH D 7 560 25 HOH TIP . HA 6 HOH D 8 561 45 HOH TIP . HA 6 HOH D 9 562 51 HOH TIP . HA 6 HOH D 10 563 52 HOH TIP . HA 6 HOH D 11 564 54 HOH TIP . HA 6 HOH D 12 565 60 HOH TIP . HA 6 HOH D 13 566 68 HOH TIP . HA 6 HOH D 14 567 71 HOH TIP . HA 6 HOH D 15 568 76 HOH TIP . HA 6 HOH D 16 569 88 HOH TIP . HA 6 HOH D 17 570 93 HOH TIP . HA 6 HOH D 18 571 94 HOH TIP . HA 6 HOH D 19 572 108 HOH TIP . HA 6 HOH D 20 573 109 HOH TIP . HA 6 HOH D 21 574 114 HOH TIP . HA 6 HOH D 22 575 115 HOH TIP . HA 6 HOH D 23 576 118 HOH TIP . HA 6 HOH D 24 577 136 HOH TIP . HA 6 HOH D 25 578 137 HOH TIP . HA 6 HOH D 26 579 144 HOH TIP . HA 6 HOH D 27 580 148 HOH TIP . HA 6 HOH D 28 581 150 HOH TIP . HA 6 HOH D 29 582 151 HOH TIP . HA 6 HOH D 30 583 152 HOH TIP . HA 6 HOH D 31 584 154 HOH TIP . HA 6 HOH D 32 585 157 HOH TIP . HA 6 HOH D 33 586 160 HOH TIP . HA 6 HOH D 34 587 168 HOH TIP . HA 6 HOH D 35 588 179 HOH TIP . HA 6 HOH D 36 589 181 HOH TIP . HA 6 HOH D 37 590 188 HOH TIP . HA 6 HOH D 38 591 189 HOH TIP . HA 6 HOH D 39 592 194 HOH TIP . HA 6 HOH D 40 593 201 HOH TIP . HA 6 HOH D 41 594 202 HOH TIP . HA 6 HOH D 42 595 204 HOH TIP . HA 6 HOH D 43 596 207 HOH TIP . HA 6 HOH D 44 597 215 HOH TIP . HA 6 HOH D 45 598 216 HOH TIP . IA 6 HOH E 1 552 11 HOH TIP . IA 6 HOH E 2 554 14 HOH TIP . IA 6 HOH E 3 555 19 HOH TIP . IA 6 HOH E 4 556 26 HOH TIP . IA 6 HOH E 5 557 33 HOH TIP . IA 6 HOH E 6 558 40 HOH TIP . IA 6 HOH E 7 559 41 HOH TIP . IA 6 HOH E 8 560 47 HOH TIP . IA 6 HOH E 9 561 49 HOH TIP . IA 6 HOH E 10 562 53 HOH TIP . IA 6 HOH E 11 563 56 HOH TIP . IA 6 HOH E 12 564 58 HOH TIP . IA 6 HOH E 13 565 63 HOH TIP . IA 6 HOH E 14 566 66 HOH TIP . IA 6 HOH E 15 567 79 HOH TIP . IA 6 HOH E 16 568 95 HOH TIP . IA 6 HOH E 17 569 99 HOH TIP . IA 6 HOH E 18 570 100 HOH TIP . IA 6 HOH E 19 571 104 HOH TIP . IA 6 HOH E 20 572 113 HOH TIP . IA 6 HOH E 21 573 123 HOH TIP . IA 6 HOH E 22 574 124 HOH TIP . IA 6 HOH E 23 575 126 HOH TIP . IA 6 HOH E 24 576 127 HOH TIP . IA 6 HOH E 25 577 129 HOH TIP . IA 6 HOH E 26 578 146 HOH TIP . IA 6 HOH E 27 579 153 HOH TIP . IA 6 HOH E 28 580 164 HOH TIP . IA 6 HOH E 29 581 172 HOH TIP . IA 6 HOH E 30 582 175 HOH TIP . IA 6 HOH E 31 583 185 HOH TIP . IA 6 HOH E 32 584 196 HOH TIP . IA 6 HOH E 33 585 199 HOH TIP . IA 6 HOH E 34 586 212 HOH TIP . IA 6 HOH E 35 587 218 HOH TIP . JA 6 HOH F 1 554 23 HOH TIP . JA 6 HOH F 2 555 30 HOH TIP . JA 6 HOH F 3 556 48 HOH TIP . JA 6 HOH F 4 557 64 HOH TIP . JA 6 HOH F 5 558 69 HOH TIP . JA 6 HOH F 6 559 75 HOH TIP . JA 6 HOH F 7 560 81 HOH TIP . JA 6 HOH F 8 561 82 HOH TIP . JA 6 HOH F 9 562 87 HOH TIP . JA 6 HOH F 10 563 101 HOH TIP . JA 6 HOH F 11 564 103 HOH TIP . JA 6 HOH F 12 565 122 HOH TIP . JA 6 HOH F 13 566 125 HOH TIP . JA 6 HOH F 14 567 145 HOH TIP . JA 6 HOH F 15 568 161 HOH TIP . JA 6 HOH F 16 569 165 HOH TIP . JA 6 HOH F 17 570 177 HOH TIP . JA 6 HOH F 18 571 186 HOH TIP . JA 6 HOH F 19 572 205 HOH TIP . JA 6 HOH F 20 573 213 HOH TIP . JA 6 HOH F 21 574 217 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA H3P . . . W 5 41.272 53.199 128.406 1 133.13 ? OAA H3P 552 D 1 HETATM 2 C CAP H3P . . . W 5 40.52 54.239 128.862 1 135.03 ? CAP H3P 552 D 1 HETATM 3 C CAL H3P . . . W 5 39.175 54.3 128.526 1 136 ? CAL H3P 552 D 1 HETATM 4 CL CLAC H3P . . . W 5 38.467 53.14 127.478 1 137.19 ? CLAC H3P 552 D 1 HETATM 5 C CAI H3P . . . W 5 38.398 55.366 129.032 1 138.48 ? CAI H3P 552 D 1 HETATM 6 C CAN H3P . . . W 5 38.967 56.31 129.837 1 139.56 ? CAN H3P 552 D 1 HETATM 7 CL CLAE H3P . . . W 5 37.949 57.511 130.578 1 143.17 ? CLAE H3P 552 D 1 HETATM 8 C CAR H3P . . . W 5 40.333 56.247 130.157 1 137.69 ? CAR H3P 552 D 1 HETATM 9 CL CLAG H3P . . . W 5 41.125 57.498 131.019 1 137.97 ? CLAG H3P 552 D 1 HETATM 10 C CAT H3P . . . W 5 41.116 55.195 129.668 1 134.21 ? CAT H3P 552 D 1 HETATM 11 C CAK H3P . . . W 5 42.586 55.103 130.062 1 131.06 ? CAK H3P 552 D 1 HETATM 12 C CAU H3P . . . W 5 42.807 53.804 130.837 1 128.66 ? CAU H3P 552 D 1 HETATM 13 C CAS H3P . . . W 5 42.374 53.69 132.166 1 125.62 ? CAS H3P 552 D 1 HETATM 14 CL CLAH H3P . . . W 5 41.716 55.07 132.961 1 118.97 ? CLAH H3P 552 D 1 HETATM 15 C CAO H3P . . . W 5 42.519 52.484 132.84 1 125.56 ? CAO H3P 552 D 1 HETATM 16 CL CLAF H3P . . . W 5 42.015 52.364 134.492 1 124.9 ? CLAF H3P 552 D 1 HETATM 17 C CAJ H3P . . . W 5 43.087 51.382 132.21 1 129.6 ? CAJ H3P 552 D 1 HETATM 18 C CAM H3P . . . W 5 43.533 51.491 130.907 1 132.01 ? CAM H3P 552 D 1 HETATM 19 CL CLAD H3P . . . W 5 44.238 50.142 130.097 1 136.66 ? CLAD H3P 552 D 1 HETATM 20 C CAQ H3P . . . W 5 43.394 52.717 130.227 1 131.28 ? CAQ H3P 552 D 1 HETATM 21 O OAB H3P . . . W 5 43.887 52.846 128.971 1 132.34 ? OAB H3P 552 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #