data_3ETM # _model_server_result.job_id u3rtbq-mzNcWjO-B4ShwUg _model_server_result.datetime_utc '2024-11-14 06:40:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3etm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 3ETM # _exptl.entry_id 3ETM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ETM _cell.length_a 70.325 _cell.length_b 70.325 _cell.length_c 104.279 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ETM _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 70.325 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 35.1625 60.903237 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O HOH . A HOH 200 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc2 D O2A CDP . A CDP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc3 F O2A CDP . B CDP 201 1_555 E MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc4 E MG MG . B MG 202 1_555 H O HOH . B HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ETM _atom_sites.fract_transf_matrix[1][1] 0.01422 _atom_sites.fract_transf_matrix[1][2] 0.00821 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01642 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 202 202 MG MG . D 3 CDP A 1 201 201 CDP CDP . E 2 MG B 1 202 202 MG MG . F 3 CDP B 1 201 201 CDP CDP . G 4 HOH A 1 142 142 HOH HOH . G 4 HOH A 2 143 143 HOH HOH . G 4 HOH A 3 144 1 HOH HOH . G 4 HOH A 4 145 145 HOH HOH . G 4 HOH A 5 146 146 HOH HOH . G 4 HOH A 6 147 4 HOH HOH . G 4 HOH A 7 148 6 HOH HOH . G 4 HOH A 8 149 8 HOH HOH . G 4 HOH A 9 150 9 HOH HOH . G 4 HOH A 10 151 151 HOH HOH . G 4 HOH A 11 152 152 HOH HOH . G 4 HOH A 12 153 10 HOH HOH . G 4 HOH A 13 154 11 HOH HOH . G 4 HOH A 14 155 12 HOH HOH . G 4 HOH A 15 156 13 HOH HOH . G 4 HOH A 16 157 16 HOH HOH . G 4 HOH A 17 158 158 HOH HOH . G 4 HOH A 18 159 159 HOH HOH . G 4 HOH A 19 160 160 HOH HOH . G 4 HOH A 20 161 17 HOH HOH . G 4 HOH A 21 162 162 HOH HOH . G 4 HOH A 22 163 163 HOH HOH . G 4 HOH A 23 164 164 HOH HOH . G 4 HOH A 24 165 21 HOH HOH . G 4 HOH A 25 166 22 HOH HOH . G 4 HOH A 26 167 167 HOH HOH . G 4 HOH A 27 168 23 HOH HOH . G 4 HOH A 28 169 169 HOH HOH . G 4 HOH A 29 170 24 HOH HOH . G 4 HOH A 30 171 171 HOH HOH . G 4 HOH A 31 172 172 HOH HOH . G 4 HOH A 32 173 25 HOH HOH . G 4 HOH A 33 174 28 HOH HOH . G 4 HOH A 34 175 175 HOH HOH . G 4 HOH A 35 176 176 HOH HOH . G 4 HOH A 36 177 177 HOH HOH . G 4 HOH A 37 178 31 HOH HOH . G 4 HOH A 38 179 32 HOH HOH . G 4 HOH A 39 180 34 HOH HOH . G 4 HOH A 40 181 181 HOH HOH . G 4 HOH A 41 182 35 HOH HOH . G 4 HOH A 42 183 183 HOH HOH . G 4 HOH A 43 184 36 HOH HOH . G 4 HOH A 44 185 37 HOH HOH . G 4 HOH A 45 186 40 HOH HOH . G 4 HOH A 46 187 42 HOH HOH . G 4 HOH A 47 188 43 HOH HOH . G 4 HOH A 48 189 189 HOH HOH . G 4 HOH A 49 190 45 HOH HOH . G 4 HOH A 50 191 46 HOH HOH . G 4 HOH A 51 192 47 HOH HOH . G 4 HOH A 52 193 193 HOH HOH . G 4 HOH A 53 194 48 HOH HOH . G 4 HOH A 54 195 50 HOH HOH . G 4 HOH A 55 196 196 HOH HOH . G 4 HOH A 56 197 51 HOH HOH . G 4 HOH A 57 198 198 HOH HOH . G 4 HOH A 58 199 53 HOH HOH . G 4 HOH A 59 200 55 HOH HOH . G 4 HOH A 60 203 56 HOH HOH . G 4 HOH A 61 204 60 HOH HOH . G 4 HOH A 62 205 61 HOH HOH . G 4 HOH A 63 206 206 HOH HOH . G 4 HOH A 64 207 207 HOH HOH . G 4 HOH A 65 208 208 HOH HOH . G 4 HOH A 66 209 64 HOH HOH . G 4 HOH A 67 210 210 HOH HOH . G 4 HOH A 68 211 66 HOH HOH . G 4 HOH A 69 212 67 HOH HOH . G 4 HOH A 70 213 68 HOH HOH . G 4 HOH A 71 214 214 HOH HOH . G 4 HOH A 72 215 73 HOH HOH . G 4 HOH A 73 216 74 HOH HOH . G 4 HOH A 74 217 217 HOH HOH . G 4 HOH A 75 218 76 HOH HOH . G 4 HOH A 76 219 219 HOH HOH . G 4 HOH A 77 220 220 HOH HOH . G 4 HOH A 78 221 81 HOH HOH . G 4 HOH A 79 222 86 HOH HOH . G 4 HOH A 80 223 223 HOH HOH . G 4 HOH A 81 224 224 HOH HOH . G 4 HOH A 82 225 87 HOH HOH . G 4 HOH A 83 226 226 HOH HOH . G 4 HOH A 84 227 227 HOH HOH . G 4 HOH A 85 228 89 HOH HOH . G 4 HOH A 86 229 90 HOH HOH . G 4 HOH A 87 230 91 HOH HOH . G 4 HOH A 88 231 231 HOH HOH . G 4 HOH A 89 232 94 HOH HOH . G 4 HOH A 90 233 96 HOH HOH . G 4 HOH A 91 234 234 HOH HOH . G 4 HOH A 92 235 99 HOH HOH . G 4 HOH A 93 236 236 HOH HOH . G 4 HOH A 94 237 100 HOH HOH . G 4 HOH A 95 238 238 HOH HOH . G 4 HOH A 96 239 239 HOH HOH . G 4 HOH A 97 240 101 HOH HOH . G 4 HOH A 98 241 102 HOH HOH . G 4 HOH A 99 242 103 HOH HOH . G 4 HOH A 100 243 107 HOH HOH . G 4 HOH A 101 244 109 HOH HOH . G 4 HOH A 102 245 245 HOH HOH . G 4 HOH A 103 246 246 HOH HOH . G 4 HOH A 104 247 111 HOH HOH . G 4 HOH A 105 248 248 HOH HOH . G 4 HOH A 106 249 113 HOH HOH . G 4 HOH A 107 250 114 HOH HOH . G 4 HOH A 108 251 115 HOH HOH . G 4 HOH A 109 252 116 HOH HOH . G 4 HOH A 110 253 118 HOH HOH . G 4 HOH A 111 254 121 HOH HOH . G 4 HOH A 112 255 122 HOH HOH . G 4 HOH A 113 256 123 HOH HOH . G 4 HOH A 114 257 125 HOH HOH . G 4 HOH A 115 258 126 HOH HOH . G 4 HOH A 116 259 128 HOH HOH . G 4 HOH A 117 260 130 HOH HOH . G 4 HOH A 118 261 132 HOH HOH . G 4 HOH A 119 262 135 HOH HOH . G 4 HOH A 120 263 139 HOH HOH . G 4 HOH A 121 264 141 HOH HOH . G 4 HOH A 122 265 201 HOH HOH . G 4 HOH A 123 266 202 HOH HOH . H 4 HOH B 1 142 2 HOH HOH . H 4 HOH B 2 143 3 HOH HOH . H 4 HOH B 3 144 144 HOH HOH . H 4 HOH B 4 145 5 HOH HOH . H 4 HOH B 5 146 7 HOH HOH . H 4 HOH B 6 147 147 HOH HOH . H 4 HOH B 7 148 148 HOH HOH . H 4 HOH B 8 149 149 HOH HOH . H 4 HOH B 9 150 150 HOH HOH . H 4 HOH B 10 151 14 HOH HOH . H 4 HOH B 11 152 15 HOH HOH . H 4 HOH B 12 153 153 HOH HOH . H 4 HOH B 13 154 154 HOH HOH . H 4 HOH B 14 155 155 HOH HOH . H 4 HOH B 15 156 156 HOH HOH . H 4 HOH B 16 157 157 HOH HOH . H 4 HOH B 17 158 18 HOH HOH . H 4 HOH B 18 159 19 HOH HOH . H 4 HOH B 19 160 20 HOH HOH . H 4 HOH B 20 161 161 HOH HOH . H 4 HOH B 21 162 26 HOH HOH . H 4 HOH B 22 163 27 HOH HOH . H 4 HOH B 23 164 29 HOH HOH . H 4 HOH B 24 165 165 HOH HOH . H 4 HOH B 25 166 166 HOH HOH . H 4 HOH B 26 167 30 HOH HOH . H 4 HOH B 27 168 168 HOH HOH . H 4 HOH B 28 169 33 HOH HOH . H 4 HOH B 29 170 170 HOH HOH . H 4 HOH B 30 171 38 HOH HOH . H 4 HOH B 31 172 39 HOH HOH . H 4 HOH B 32 173 173 HOH HOH . H 4 HOH B 33 174 174 HOH HOH . H 4 HOH B 34 175 41 HOH HOH . H 4 HOH B 35 176 44 HOH HOH . H 4 HOH B 36 177 49 HOH HOH . H 4 HOH B 37 178 178 HOH HOH . H 4 HOH B 38 179 179 HOH HOH . H 4 HOH B 39 180 180 HOH HOH . H 4 HOH B 40 181 52 HOH HOH . H 4 HOH B 41 182 182 HOH HOH . H 4 HOH B 42 183 54 HOH HOH . H 4 HOH B 43 184 184 HOH HOH . H 4 HOH B 44 185 185 HOH HOH . H 4 HOH B 45 186 186 HOH HOH . H 4 HOH B 46 187 187 HOH HOH . H 4 HOH B 47 188 188 HOH HOH . H 4 HOH B 48 189 57 HOH HOH . H 4 HOH B 49 190 190 HOH HOH . H 4 HOH B 50 191 191 HOH HOH . H 4 HOH B 51 192 192 HOH HOH . H 4 HOH B 52 193 58 HOH HOH . H 4 HOH B 53 194 194 HOH HOH . H 4 HOH B 54 195 195 HOH HOH . H 4 HOH B 55 196 59 HOH HOH . H 4 HOH B 56 197 197 HOH HOH . H 4 HOH B 57 198 62 HOH HOH . H 4 HOH B 58 199 199 HOH HOH . H 4 HOH B 59 200 200 HOH HOH . H 4 HOH B 60 203 203 HOH HOH . H 4 HOH B 61 204 204 HOH HOH . H 4 HOH B 62 205 205 HOH HOH . H 4 HOH B 63 206 63 HOH HOH . H 4 HOH B 64 207 65 HOH HOH . H 4 HOH B 65 208 69 HOH HOH . H 4 HOH B 66 209 209 HOH HOH . H 4 HOH B 67 210 70 HOH HOH . H 4 HOH B 68 211 211 HOH HOH . H 4 HOH B 69 212 212 HOH HOH . H 4 HOH B 70 213 213 HOH HOH . H 4 HOH B 71 214 71 HOH HOH . H 4 HOH B 72 215 215 HOH HOH . H 4 HOH B 73 216 216 HOH HOH . H 4 HOH B 74 217 72 HOH HOH . H 4 HOH B 75 218 218 HOH HOH . H 4 HOH B 76 219 75 HOH HOH . H 4 HOH B 77 220 77 HOH HOH . H 4 HOH B 78 221 221 HOH HOH . H 4 HOH B 79 222 222 HOH HOH . H 4 HOH B 80 223 78 HOH HOH . H 4 HOH B 81 224 79 HOH HOH . H 4 HOH B 82 225 225 HOH HOH . H 4 HOH B 83 226 80 HOH HOH . H 4 HOH B 84 227 82 HOH HOH . H 4 HOH B 85 228 228 HOH HOH . H 4 HOH B 86 229 229 HOH HOH . H 4 HOH B 87 230 230 HOH HOH . H 4 HOH B 88 231 83 HOH HOH . H 4 HOH B 89 232 232 HOH HOH . H 4 HOH B 90 233 233 HOH HOH . H 4 HOH B 91 234 84 HOH HOH . H 4 HOH B 92 235 235 HOH HOH . H 4 HOH B 93 236 85 HOH HOH . H 4 HOH B 94 237 237 HOH HOH . H 4 HOH B 95 238 88 HOH HOH . H 4 HOH B 96 239 92 HOH HOH . H 4 HOH B 97 240 240 HOH HOH . H 4 HOH B 98 241 241 HOH HOH . H 4 HOH B 99 242 242 HOH HOH . H 4 HOH B 100 243 243 HOH HOH . H 4 HOH B 101 244 244 HOH HOH . H 4 HOH B 102 245 93 HOH HOH . H 4 HOH B 103 246 95 HOH HOH . H 4 HOH B 104 247 247 HOH HOH . H 4 HOH B 105 248 97 HOH HOH . H 4 HOH B 106 249 98 HOH HOH . H 4 HOH B 107 250 104 HOH HOH . H 4 HOH B 108 251 105 HOH HOH . H 4 HOH B 109 252 106 HOH HOH . H 4 HOH B 110 253 108 HOH HOH . H 4 HOH B 111 254 110 HOH HOH . H 4 HOH B 112 255 112 HOH HOH . H 4 HOH B 113 256 117 HOH HOH . H 4 HOH B 114 257 119 HOH HOH . H 4 HOH B 115 258 120 HOH HOH . H 4 HOH B 116 259 124 HOH HOH . H 4 HOH B 117 260 127 HOH HOH . H 4 HOH B 118 261 129 HOH HOH . H 4 HOH B 119 262 131 HOH HOH . H 4 HOH B 120 263 133 HOH HOH . H 4 HOH B 121 264 134 HOH HOH . H 4 HOH B 122 265 136 HOH HOH . H 4 HOH B 123 266 137 HOH HOH . H 4 HOH B 124 267 138 HOH HOH . H 4 HOH B 125 268 140 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 54.698 _atom_site.Cartn_y 13.555 _atom_site.Cartn_z 33.234 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #