data_3ETS # _model_server_result.job_id reKrJRUVLBxohb8eqBWxvw _model_server_result.datetime_utc '2024-11-15 14:55:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ets # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":572}' # _entry.id 3ETS # _exptl.entry_id 3ETS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 176.169 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-hydroxy-4-methyl-2H-chromen-2-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ETS _cell.length_a 181.83 _cell.length_b 181.83 _cell.length_c 100.66 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ETS _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 -x+y,y,-z+2/3 -1 0 0 0 1 0 0 0 -1 0 0 67.106667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 418 A CYS 418 1_555 A SG CYS 424 A CYS 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? disulf ? disulf2 B SG CYS 418 B CYS 418 1_555 B SG CYS 424 B CYS 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? covale ? covale1 A C GLN 435 A GLN 435 1_555 A N HS8 436 A HS8 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C HS8 436 A HS8 436 1_555 A N THR 437 A THR 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B C GLN 435 B GLN 435 1_555 B N HS8 436 B HS8 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 B C HS8 436 B HS8 436 1_555 B N THR 437 B THR 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C10 H8 O3' _chem_comp.formula_weight 176.169 _chem_comp.id 4MU _chem_comp.mon_nstd_flag . _chem_comp.name 7-hydroxy-4-methyl-2H-chromen-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-methylumbelliferone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 4MU doub 1 n y C5 C4A 4MU sing 2 n y C6 C7 4MU sing 3 n y C7 C8 4MU doub 4 n y C7 O1' 4MU sing 5 n n C2 C3 4MU sing 6 n n C2 O2 4MU doub 7 n n C2 O1 4MU sing 8 n n C3 C4 4MU doub 9 n n C4 CM4 4MU sing 10 n n C4 C4A 4MU sing 11 n n O1 C8A 4MU sing 12 n n C4A C8A 4MU doub 13 n y C8A C8 4MU sing 14 n y C5 H5 4MU sing 15 n n C6 H6 4MU sing 16 n n C3 H3 4MU sing 17 n n CM4 HM4 4MU sing 18 n n CM4 HM4A 4MU sing 19 n n CM4 HM4B 4MU sing 20 n n C8 H8 4MU sing 21 n n O1' HO1' 4MU sing 22 n n # _atom_sites.entry_id 3ETS _atom_sites.fract_transf_matrix[1][1] 0.0055 _atom_sites.fract_transf_matrix[1][2] 0.003175 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 4MU A 1 572 572 4MU 4MU . D 3 SO4 A 1 574 574 SO4 SO4 . E 3 SO4 A 1 575 575 SO4 SO4 . F 3 SO4 A 1 576 576 SO4 SO4 . G 2 4MU B 1 572 572 4MU 4MU . H 3 SO4 B 1 574 574 SO4 SO4 . I 3 SO4 B 1 575 575 SO4 SO4 . J 3 SO4 B 1 576 576 SO4 SO4 . K 4 HOH A 1 577 577 HOH HOH . K 4 HOH A 2 578 578 HOH HOH . K 4 HOH A 3 579 579 HOH HOH . K 4 HOH A 4 580 580 HOH HOH . K 4 HOH A 5 581 581 HOH HOH . K 4 HOH A 6 582 582 HOH HOH . K 4 HOH A 7 583 583 HOH HOH . K 4 HOH A 8 584 584 HOH HOH . K 4 HOH A 9 585 585 HOH HOH . K 4 HOH A 10 586 586 HOH HOH . K 4 HOH A 11 587 587 HOH HOH . K 4 HOH A 12 588 588 HOH HOH . K 4 HOH A 13 589 589 HOH HOH . K 4 HOH A 14 590 590 HOH HOH . K 4 HOH A 15 591 591 HOH HOH . K 4 HOH A 16 592 592 HOH HOH . K 4 HOH A 17 593 593 HOH HOH . K 4 HOH A 18 594 594 HOH HOH . K 4 HOH A 19 595 595 HOH HOH . K 4 HOH A 20 596 596 HOH HOH . K 4 HOH A 21 597 597 HOH HOH . K 4 HOH A 22 598 598 HOH HOH . K 4 HOH A 23 599 599 HOH HOH . K 4 HOH A 24 600 600 HOH HOH . K 4 HOH A 25 601 601 HOH HOH . K 4 HOH A 26 602 602 HOH HOH . K 4 HOH A 27 603 603 HOH HOH . K 4 HOH A 28 604 604 HOH HOH . K 4 HOH A 29 605 605 HOH HOH . K 4 HOH A 30 606 606 HOH HOH . K 4 HOH A 31 607 607 HOH HOH . K 4 HOH A 32 608 608 HOH HOH . K 4 HOH A 33 609 609 HOH HOH . K 4 HOH A 34 610 610 HOH HOH . K 4 HOH A 35 611 611 HOH HOH . K 4 HOH A 36 612 612 HOH HOH . K 4 HOH A 37 613 613 HOH HOH . K 4 HOH A 38 614 614 HOH HOH . K 4 HOH A 39 615 615 HOH HOH . K 4 HOH A 40 616 616 HOH HOH . K 4 HOH A 41 617 617 HOH HOH . K 4 HOH A 42 618 618 HOH HOH . K 4 HOH A 43 619 619 HOH HOH . K 4 HOH A 44 620 620 HOH HOH . K 4 HOH A 45 621 621 HOH HOH . K 4 HOH A 46 622 622 HOH HOH . K 4 HOH A 47 623 623 HOH HOH . K 4 HOH A 48 624 624 HOH HOH . K 4 HOH A 49 625 625 HOH HOH . K 4 HOH A 50 626 626 HOH HOH . K 4 HOH A 51 627 627 HOH HOH . K 4 HOH A 52 628 628 HOH HOH . K 4 HOH A 53 629 629 HOH HOH . K 4 HOH A 54 630 630 HOH HOH . K 4 HOH A 55 631 631 HOH HOH . K 4 HOH A 56 632 632 HOH HOH . K 4 HOH A 57 633 633 HOH HOH . K 4 HOH A 58 634 634 HOH HOH . K 4 HOH A 59 635 635 HOH HOH . K 4 HOH A 60 636 636 HOH HOH . K 4 HOH A 61 637 637 HOH HOH . K 4 HOH A 62 638 638 HOH HOH . K 4 HOH A 63 639 639 HOH HOH . K 4 HOH A 64 640 640 HOH HOH . K 4 HOH A 65 641 641 HOH HOH . K 4 HOH A 66 642 642 HOH HOH . K 4 HOH A 67 643 643 HOH HOH . K 4 HOH A 68 644 644 HOH HOH . K 4 HOH A 69 645 645 HOH HOH . K 4 HOH A 70 646 646 HOH HOH . K 4 HOH A 71 647 647 HOH HOH . K 4 HOH A 72 648 648 HOH HOH . K 4 HOH A 73 649 649 HOH HOH . K 4 HOH A 74 650 650 HOH HOH . K 4 HOH A 75 651 651 HOH HOH . K 4 HOH A 76 652 652 HOH HOH . K 4 HOH A 77 653 653 HOH HOH . K 4 HOH A 78 654 654 HOH HOH . K 4 HOH A 79 655 655 HOH HOH . K 4 HOH A 80 656 656 HOH HOH . K 4 HOH A 81 657 657 HOH HOH . K 4 HOH A 82 658 658 HOH HOH . K 4 HOH A 83 659 659 HOH HOH . K 4 HOH A 84 660 660 HOH HOH . K 4 HOH A 85 661 661 HOH HOH . K 4 HOH A 86 662 662 HOH HOH . K 4 HOH A 87 663 663 HOH HOH . K 4 HOH A 88 664 664 HOH HOH . L 4 HOH B 1 577 577 HOH HOH . L 4 HOH B 2 578 578 HOH HOH . L 4 HOH B 3 579 579 HOH HOH . L 4 HOH B 4 580 580 HOH HOH . L 4 HOH B 5 581 581 HOH HOH . L 4 HOH B 6 582 582 HOH HOH . L 4 HOH B 7 583 583 HOH HOH . L 4 HOH B 8 584 584 HOH HOH . L 4 HOH B 9 585 585 HOH HOH . L 4 HOH B 10 586 586 HOH HOH . L 4 HOH B 11 587 587 HOH HOH . L 4 HOH B 12 588 588 HOH HOH . L 4 HOH B 13 589 589 HOH HOH . L 4 HOH B 14 590 590 HOH HOH . L 4 HOH B 15 591 591 HOH HOH . L 4 HOH B 16 592 592 HOH HOH . L 4 HOH B 17 593 593 HOH HOH . L 4 HOH B 18 594 594 HOH HOH . L 4 HOH B 19 595 595 HOH HOH . L 4 HOH B 20 596 596 HOH HOH . L 4 HOH B 21 597 597 HOH HOH . L 4 HOH B 22 598 598 HOH HOH . L 4 HOH B 23 599 599 HOH HOH . L 4 HOH B 24 600 600 HOH HOH . L 4 HOH B 25 601 601 HOH HOH . L 4 HOH B 26 602 602 HOH HOH . L 4 HOH B 27 603 603 HOH HOH . L 4 HOH B 28 604 604 HOH HOH . L 4 HOH B 29 605 605 HOH HOH . L 4 HOH B 30 606 606 HOH HOH . L 4 HOH B 31 607 607 HOH HOH . L 4 HOH B 32 608 608 HOH HOH . L 4 HOH B 33 609 609 HOH HOH . L 4 HOH B 34 610 610 HOH HOH . L 4 HOH B 35 611 611 HOH HOH . L 4 HOH B 36 612 612 HOH HOH . L 4 HOH B 37 613 613 HOH HOH . L 4 HOH B 38 614 614 HOH HOH . L 4 HOH B 39 615 615 HOH HOH . L 4 HOH B 40 616 616 HOH HOH . L 4 HOH B 41 617 617 HOH HOH . L 4 HOH B 42 618 618 HOH HOH . L 4 HOH B 43 619 619 HOH HOH . L 4 HOH B 44 620 620 HOH HOH . L 4 HOH B 45 621 621 HOH HOH . L 4 HOH B 46 622 622 HOH HOH . L 4 HOH B 47 623 623 HOH HOH . L 4 HOH B 48 624 624 HOH HOH . L 4 HOH B 49 625 625 HOH HOH . L 4 HOH B 50 626 626 HOH HOH . L 4 HOH B 51 627 627 HOH HOH . L 4 HOH B 52 628 628 HOH HOH . L 4 HOH B 53 629 629 HOH HOH . L 4 HOH B 54 630 630 HOH HOH . L 4 HOH B 55 631 631 HOH HOH . L 4 HOH B 56 632 632 HOH HOH . L 4 HOH B 57 633 633 HOH HOH . L 4 HOH B 58 634 634 HOH HOH . L 4 HOH B 59 635 635 HOH HOH . L 4 HOH B 60 636 636 HOH HOH . L 4 HOH B 61 637 637 HOH HOH . L 4 HOH B 62 638 638 HOH HOH . L 4 HOH B 63 639 639 HOH HOH . L 4 HOH B 64 640 640 HOH HOH . L 4 HOH B 65 641 641 HOH HOH . L 4 HOH B 66 642 642 HOH HOH . L 4 HOH B 67 643 643 HOH HOH . L 4 HOH B 68 644 644 HOH HOH . L 4 HOH B 69 645 645 HOH HOH . L 4 HOH B 70 646 646 HOH HOH . L 4 HOH B 71 647 647 HOH HOH . L 4 HOH B 72 648 648 HOH HOH . L 4 HOH B 73 649 649 HOH HOH . L 4 HOH B 74 650 650 HOH HOH . L 4 HOH B 75 651 651 HOH HOH . L 4 HOH B 76 652 652 HOH HOH . L 4 HOH B 77 653 653 HOH HOH . L 4 HOH B 78 654 654 HOH HOH . L 4 HOH B 79 655 655 HOH HOH . L 4 HOH B 80 656 656 HOH HOH . L 4 HOH B 81 657 657 HOH HOH . L 4 HOH B 82 658 658 HOH HOH . L 4 HOH B 83 659 659 HOH HOH . L 4 HOH B 84 660 660 HOH HOH . L 4 HOH B 85 661 661 HOH HOH . L 4 HOH B 86 662 662 HOH HOH . L 4 HOH B 87 663 663 HOH HOH . L 4 HOH B 88 664 664 HOH HOH . L 4 HOH B 89 665 665 HOH HOH . L 4 HOH B 90 666 666 HOH HOH . L 4 HOH B 91 667 667 HOH HOH . L 4 HOH B 92 668 668 HOH HOH . L 4 HOH B 93 669 669 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 4MU . . . C 2 -23.999 36.006 16.313 1 51.85 ? C5 4MU 572 A 1 HETATM 2 C C6 4MU . . . C 2 -23.065 36.548 15.464 0.42 51.76 ? C6 4MU 572 A 1 HETATM 3 C C7 4MU . . . C 2 -21.716 36.594 15.81 1 50.18 ? C7 4MU 572 A 1 HETATM 4 C C2 4MU . . . C 2 -22.524 34.459 19.912 0.46 60.49 ? C2 4MU 572 A 1 HETATM 5 C C3 4MU . . . C 2 -23.926 34.4 19.651 0.86 58.2 ? C3 4MU 572 A 1 HETATM 6 C C4 4MU . . . C 2 -24.486 34.907 18.451 0.96 58.24 ? C4 4MU 572 A 1 HETATM 7 O O2 4MU . . . C 2 -22.028 34.009 20.965 0.85 65.06 ? O2 4MU 572 A 1 HETATM 8 O O1 4MU . . . C 2 -21.607 34.993 19.035 1 59.29 ? O1 4MU 572 A 1 HETATM 9 C CM4 4MU . . . C 2 -25.958 34.917 18.017 1 57.78 ? CM4 4MU 572 A 1 HETATM 10 C C4A 4MU . . . C 2 -23.531 35.505 17.509 0.67 55.22 ? C4A 4MU 572 A 1 HETATM 11 C C8A 4MU . . . C 2 -22.075 35.521 17.858 0.65 53.67 ? C8A 4MU 572 A 1 HETATM 12 C C8 4MU . . . C 2 -21.196 36.064 16.967 1 48 ? C8 4MU 572 A 1 HETATM 13 O O1' 4MU . . . C 2 -20.869 37.112 14.963 0.57 51.33 ? O1' 4MU 572 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #