data_3EU7 # _model_server_result.job_id emwYUrZ46gNySHyBiP4Hcw _model_server_result.datetime_utc '2024-11-04 20:23:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3eu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3EU7 # _exptl.entry_id 3EU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.23 _cell.angle_gamma 90 _cell.entry_id 3EU7 _cell.length_a 82.815 _cell.length_b 62.026 _cell.length_c 77.975 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 296 A HIS 1126 1_555 A N CSD 297 A CSD 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 297 A CSD 1127 1_555 A N ALA 298 A ALA 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 144 n n C1 C2 GOL sing 145 n n C1 H11 GOL sing 146 n n C1 H12 GOL sing 147 n n O1 HO1 GOL sing 148 n n C2 O2 GOL sing 149 n n C2 C3 GOL sing 150 n n C2 H2 GOL sing 151 n n O2 HO2 GOL sing 152 n n C3 O3 GOL sing 153 n n C3 H31 GOL sing 154 n n C3 H32 GOL sing 155 n n O3 HO3 GOL sing 156 n n # _atom_sites.entry_id 3EU7 _atom_sites.fract_transf_matrix[1][1] 0.012075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003978 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016122 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013503 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 1 1 GOL GOL . D 3 GOL A 1 2 2 GOL GOL . E 4 HOH A 1 1187 1 HOH HOH . E 4 HOH A 2 1188 5 HOH HOH . E 4 HOH A 3 1189 6 HOH HOH . E 4 HOH A 4 1190 7 HOH HOH . E 4 HOH A 5 1191 10 HOH HOH . E 4 HOH A 6 1192 11 HOH HOH . E 4 HOH A 7 1193 14 HOH HOH . E 4 HOH A 8 1194 15 HOH HOH . E 4 HOH A 9 1195 16 HOH HOH . E 4 HOH A 10 1196 18 HOH HOH . E 4 HOH A 11 1197 23 HOH HOH . E 4 HOH A 12 1198 25 HOH HOH . E 4 HOH A 13 1199 27 HOH HOH . E 4 HOH A 14 1200 29 HOH HOH . E 4 HOH A 15 1201 32 HOH HOH . E 4 HOH A 16 1202 33 HOH HOH . E 4 HOH A 17 1203 34 HOH HOH . E 4 HOH A 18 1204 35 HOH HOH . E 4 HOH A 19 1205 36 HOH HOH . E 4 HOH A 20 1206 37 HOH HOH . E 4 HOH A 21 1207 38 HOH HOH . E 4 HOH A 22 1208 39 HOH HOH . E 4 HOH A 23 1209 41 HOH HOH . E 4 HOH A 24 1210 42 HOH HOH . E 4 HOH A 25 1211 46 HOH HOH . E 4 HOH A 26 1212 47 HOH HOH . E 4 HOH A 27 1213 48 HOH HOH . E 4 HOH A 28 1214 50 HOH HOH . E 4 HOH A 29 1215 53 HOH HOH . E 4 HOH A 30 1216 58 HOH HOH . E 4 HOH A 31 1217 64 HOH HOH . E 4 HOH A 32 1218 69 HOH HOH . E 4 HOH A 33 1219 71 HOH HOH . E 4 HOH A 34 1220 87 HOH HOH . E 4 HOH A 35 1221 93 HOH HOH . E 4 HOH A 36 1222 96 HOH HOH . E 4 HOH A 37 1223 105 HOH HOH . E 4 HOH A 38 1224 107 HOH HOH . E 4 HOH A 39 1225 119 HOH HOH . E 4 HOH A 40 1226 120 HOH HOH . E 4 HOH A 41 1227 124 HOH HOH . E 4 HOH A 42 1228 130 HOH HOH . E 4 HOH A 43 1229 132 HOH HOH . E 4 HOH A 44 1230 134 HOH HOH . E 4 HOH A 45 1231 138 HOH HOH . E 4 HOH A 46 1232 140 HOH HOH . E 4 HOH A 47 1233 150 HOH HOH . E 4 HOH A 48 1234 151 HOH HOH . E 4 HOH A 49 1235 152 HOH HOH . E 4 HOH A 50 1236 153 HOH HOH . E 4 HOH A 51 1237 154 HOH HOH . E 4 HOH A 52 1238 155 HOH HOH . E 4 HOH A 53 1239 158 HOH HOH . E 4 HOH A 54 1240 159 HOH HOH . E 4 HOH A 55 1241 164 HOH HOH . E 4 HOH A 56 1242 166 HOH HOH . E 4 HOH A 57 1243 169 HOH HOH . E 4 HOH A 58 1244 175 HOH HOH . E 4 HOH A 59 1245 176 HOH HOH . E 4 HOH A 60 1246 182 HOH HOH . E 4 HOH A 61 1247 190 HOH HOH . E 4 HOH A 62 1248 195 HOH HOH . E 4 HOH A 63 1249 197 HOH HOH . E 4 HOH A 64 1250 199 HOH HOH . E 4 HOH A 65 1251 201 HOH HOH . E 4 HOH A 66 1252 204 HOH HOH . E 4 HOH A 67 1253 205 HOH HOH . E 4 HOH A 68 1254 208 HOH HOH . E 4 HOH A 69 1255 209 HOH HOH . E 4 HOH A 70 1256 220 HOH HOH . E 4 HOH A 71 1257 227 HOH HOH . E 4 HOH A 72 1258 231 HOH HOH . E 4 HOH A 73 1259 238 HOH HOH . E 4 HOH A 74 1260 241 HOH HOH . E 4 HOH A 75 1261 242 HOH HOH . E 4 HOH A 76 1262 244 HOH HOH . E 4 HOH A 77 1263 245 HOH HOH . E 4 HOH A 78 1264 247 HOH HOH . E 4 HOH A 79 1265 250 HOH HOH . E 4 HOH A 80 1266 252 HOH HOH . E 4 HOH A 81 1267 253 HOH HOH . E 4 HOH A 82 1268 256 HOH HOH . E 4 HOH A 83 1269 259 HOH HOH . E 4 HOH A 84 1270 260 HOH HOH . E 4 HOH A 85 1271 263 HOH HOH . E 4 HOH A 86 1272 266 HOH HOH . E 4 HOH A 87 1273 267 HOH HOH . E 4 HOH A 88 1274 268 HOH HOH . E 4 HOH A 89 1275 270 HOH HOH . E 4 HOH A 90 1276 271 HOH HOH . E 4 HOH A 91 1277 272 HOH HOH . E 4 HOH A 92 1278 273 HOH HOH . E 4 HOH A 93 1279 274 HOH HOH . E 4 HOH A 94 1280 275 HOH HOH . E 4 HOH A 95 1281 276 HOH HOH . E 4 HOH A 96 1282 277 HOH HOH . F 4 HOH X 1 40 2 HOH HOH . F 4 HOH X 2 41 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 -3.386 -4.853 44.463 1 61.66 ? C1 GOL 2 A 1 HETATM 2 O O1 GOL . . . D 3 -2.626 -5.098 43.285 1 64.54 ? O1 GOL 2 A 1 HETATM 3 C C2 GOL . . . D 3 -4.095 -3.488 44.467 1 58.07 ? C2 GOL 2 A 1 HETATM 4 O O2 GOL . . . D 3 -3.407 -2.515 45.245 1 64.65 ? O2 GOL 2 A 1 HETATM 5 C C3 GOL . . . D 3 -4.308 -2.964 43.051 1 56.85 ? C3 GOL 2 A 1 HETATM 6 O O3 GOL . . . D 3 -4.943 -1.697 43.11 1 52.67 ? O3 GOL 2 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #