data_3EUY # _model_server_result.job_id ZLoArAS-6rukvnSVV0vRfw _model_server_result.datetime_utc '2024-11-02 12:28:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3euy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 3EUY # _exptl.entry_id 3EUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.105 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIETHYLENE DIOXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.72 _cell.angle_gamma 90 _cell.entry_id 3EUY _cell.length_a 100.742 _cell.length_b 32.823 _cell.length_c 72.691 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C4 H8 O2' _chem_comp.formula_weight 88.105 _chem_comp.id DIO _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIETHYLENE DIOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1' DIO sing 83 n n C1 O1 DIO sing 84 n n C1 H11 DIO sing 85 n n C1 H12 DIO sing 86 n n C2 C2' DIO sing 87 n n C2 O1 DIO sing 88 n n C2 H21 DIO sing 89 n n C2 H22 DIO sing 90 n n C1' O1' DIO sing 91 n n C1' "H1'1" DIO sing 92 n n C1' "H1'2" DIO sing 93 n n C2' O1' DIO sing 94 n n C2' "H2'1" DIO sing 95 n n C2' "H2'2" DIO sing 96 n n # _atom_sites.entry_id 3EUY _atom_sites.fract_transf_matrix[1][1] 0.009926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000125 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DIO A 1 903 903 DIO DIO . D 2 DIO A 1 908 908 DIO DIO . E 2 DIO A 1 909 909 DIO DIO . F 2 DIO B 1 901 901 DIO DIO . G 2 DIO B 1 993 993 DIO DIO . H 3 HOH A 1 910 2 HOH HOH . H 3 HOH A 2 911 4 HOH HOH . H 3 HOH A 3 912 5 HOH HOH . H 3 HOH A 4 913 6 HOH HOH . H 3 HOH A 5 914 7 HOH HOH . H 3 HOH A 6 915 8 HOH HOH . H 3 HOH A 7 916 9 HOH HOH . H 3 HOH A 8 917 10 HOH HOH . H 3 HOH A 9 918 13 HOH HOH . H 3 HOH A 10 919 14 HOH HOH . H 3 HOH A 11 920 15 HOH HOH . H 3 HOH A 12 921 16 HOH HOH . H 3 HOH A 13 922 17 HOH HOH . H 3 HOH A 14 923 19 HOH HOH . H 3 HOH A 15 924 20 HOH HOH . H 3 HOH A 16 925 21 HOH HOH . H 3 HOH A 17 926 22 HOH HOH . H 3 HOH A 18 927 23 HOH HOH . H 3 HOH A 19 928 24 HOH HOH . H 3 HOH A 20 929 26 HOH HOH . H 3 HOH A 21 930 32 HOH HOH . H 3 HOH A 22 931 34 HOH HOH . H 3 HOH A 23 932 37 HOH HOH . H 3 HOH A 24 933 39 HOH HOH . H 3 HOH A 25 934 40 HOH HOH . H 3 HOH A 26 935 54 HOH HOH . H 3 HOH A 27 936 57 HOH HOH . H 3 HOH A 28 937 58 HOH HOH . H 3 HOH A 29 938 64 HOH HOH . H 3 HOH A 30 939 65 HOH HOH . H 3 HOH A 31 940 66 HOH HOH . H 3 HOH A 32 941 67 HOH HOH . H 3 HOH A 33 942 69 HOH HOH . H 3 HOH A 34 943 72 HOH HOH . H 3 HOH A 35 944 73 HOH HOH . H 3 HOH A 36 945 78 HOH HOH . H 3 HOH A 37 946 80 HOH HOH . H 3 HOH A 38 947 82 HOH HOH . H 3 HOH A 39 948 90 HOH HOH . H 3 HOH A 40 949 94 HOH HOH . H 3 HOH A 41 950 96 HOH HOH . H 3 HOH A 42 951 98 HOH HOH . H 3 HOH A 43 952 106 HOH HOH . H 3 HOH A 44 953 110 HOH HOH . H 3 HOH A 45 954 112 HOH HOH . H 3 HOH A 46 955 123 HOH HOH . H 3 HOH A 47 956 126 HOH HOH . H 3 HOH A 48 957 127 HOH HOH . H 3 HOH A 49 958 128 HOH HOH . H 3 HOH A 50 959 137 HOH HOH . H 3 HOH A 51 960 140 HOH HOH . H 3 HOH A 52 961 143 HOH HOH . H 3 HOH A 53 962 158 HOH HOH . H 3 HOH A 54 963 164 HOH HOH . H 3 HOH A 55 964 168 HOH HOH . H 3 HOH A 56 965 175 HOH HOH . H 3 HOH A 57 966 181 HOH HOH . H 3 HOH A 58 967 186 HOH HOH . H 3 HOH A 59 968 203 HOH HOH . H 3 HOH A 60 969 219 HOH HOH . H 3 HOH A 61 970 220 HOH HOH . H 3 HOH A 62 971 221 HOH HOH . H 3 HOH A 63 972 222 HOH HOH . H 3 HOH A 64 973 223 HOH HOH . H 3 HOH A 65 974 225 HOH HOH . H 3 HOH A 66 975 226 HOH HOH . H 3 HOH A 67 976 227 HOH HOH . H 3 HOH A 68 977 229 HOH HOH . H 3 HOH A 69 978 232 HOH HOH . H 3 HOH A 70 979 234 HOH HOH . H 3 HOH A 71 980 236 HOH HOH . H 3 HOH A 72 981 237 HOH HOH . H 3 HOH A 73 982 238 HOH HOH . H 3 HOH A 74 983 243 HOH HOH . H 3 HOH A 75 984 333 HOH HOH . H 3 HOH A 76 985 346 HOH HOH . H 3 HOH A 77 986 354 HOH HOH . H 3 HOH A 78 987 385 HOH HOH . H 3 HOH A 79 988 418 HOH HOH . H 3 HOH A 80 1075 211 HOH HOH . I 3 HOH B 1 994 3 HOH HOH . I 3 HOH B 2 995 28 HOH HOH . I 3 HOH B 3 996 30 HOH HOH . I 3 HOH B 4 997 88 HOH HOH . I 3 HOH B 5 998 173 HOH HOH . I 3 HOH B 6 999 224 HOH HOH . I 3 HOH B 7 1000 230 HOH HOH . I 3 HOH B 8 1001 235 HOH HOH . I 3 HOH B 9 1002 349 HOH HOH . I 3 HOH B 10 1003 404 HOH HOH . I 3 HOH B 11 1004 423 HOH HOH . I 3 HOH B 12 1005 2 HOH HOH . I 3 HOH B 13 1006 4 HOH HOH . I 3 HOH B 14 1007 6 HOH HOH . I 3 HOH B 15 1008 7 HOH HOH . I 3 HOH B 16 1009 10 HOH HOH . I 3 HOH B 17 1010 12 HOH HOH . I 3 HOH B 18 1011 13 HOH HOH . I 3 HOH B 19 1012 14 HOH HOH . I 3 HOH B 20 1013 15 HOH HOH . I 3 HOH B 21 1014 16 HOH HOH . I 3 HOH B 22 1015 17 HOH HOH . I 3 HOH B 23 1016 19 HOH HOH . I 3 HOH B 24 1017 21 HOH HOH . I 3 HOH B 25 1018 22 HOH HOH . I 3 HOH B 26 1019 23 HOH HOH . I 3 HOH B 27 1020 26 HOH HOH . I 3 HOH B 28 1021 27 HOH HOH . I 3 HOH B 29 1022 32 HOH HOH . I 3 HOH B 30 1023 34 HOH HOH . I 3 HOH B 31 1024 39 HOH HOH . I 3 HOH B 32 1025 41 HOH HOH . I 3 HOH B 33 1026 42 HOH HOH . I 3 HOH B 34 1027 44 HOH HOH . I 3 HOH B 35 1028 45 HOH HOH . I 3 HOH B 36 1029 54 HOH HOH . I 3 HOH B 37 1030 56 HOH HOH . I 3 HOH B 38 1031 58 HOH HOH . I 3 HOH B 39 1032 62 HOH HOH . I 3 HOH B 40 1033 63 HOH HOH . I 3 HOH B 41 1034 64 HOH HOH . I 3 HOH B 42 1035 65 HOH HOH . I 3 HOH B 43 1036 67 HOH HOH . I 3 HOH B 44 1037 69 HOH HOH . I 3 HOH B 45 1038 73 HOH HOH . I 3 HOH B 46 1039 75 HOH HOH . I 3 HOH B 47 1040 78 HOH HOH . I 3 HOH B 48 1041 82 HOH HOH . I 3 HOH B 49 1042 85 HOH HOH . I 3 HOH B 50 1043 87 HOH HOH . I 3 HOH B 51 1044 90 HOH HOH . I 3 HOH B 52 1045 108 HOH HOH . I 3 HOH B 53 1046 115 HOH HOH . I 3 HOH B 54 1047 118 HOH HOH . I 3 HOH B 55 1048 128 HOH HOH . I 3 HOH B 56 1049 129 HOH HOH . I 3 HOH B 57 1050 140 HOH HOH . I 3 HOH B 58 1051 142 HOH HOH . I 3 HOH B 59 1052 145 HOH HOH . I 3 HOH B 60 1053 148 HOH HOH . I 3 HOH B 61 1054 149 HOH HOH . I 3 HOH B 62 1055 150 HOH HOH . I 3 HOH B 63 1056 151 HOH HOH . I 3 HOH B 64 1057 153 HOH HOH . I 3 HOH B 65 1058 155 HOH HOH . I 3 HOH B 66 1059 156 HOH HOH . I 3 HOH B 67 1060 158 HOH HOH . I 3 HOH B 68 1061 163 HOH HOH . I 3 HOH B 69 1062 167 HOH HOH . I 3 HOH B 70 1063 173 HOH HOH . I 3 HOH B 71 1064 175 HOH HOH . I 3 HOH B 72 1065 176 HOH HOH . I 3 HOH B 73 1066 178 HOH HOH . I 3 HOH B 74 1067 179 HOH HOH . I 3 HOH B 75 1068 180 HOH HOH . I 3 HOH B 76 1069 187 HOH HOH . I 3 HOH B 77 1070 189 HOH HOH . I 3 HOH B 78 1071 195 HOH HOH . I 3 HOH B 79 1072 198 HOH HOH . I 3 HOH B 80 1073 201 HOH HOH . I 3 HOH B 81 1074 209 HOH HOH . I 3 HOH B 82 1076 212 HOH HOH . I 3 HOH B 83 1077 216 HOH HOH . I 3 HOH B 84 1078 226 HOH HOH . I 3 HOH B 85 1079 229 HOH HOH . I 3 HOH B 86 1080 239 HOH HOH . I 3 HOH B 87 1081 241 HOH HOH . I 3 HOH B 88 1082 243 HOH HOH . I 3 HOH B 89 1083 248 HOH HOH . I 3 HOH B 90 1084 249 HOH HOH . I 3 HOH B 91 1085 250 HOH HOH . I 3 HOH B 92 1086 251 HOH HOH . I 3 HOH B 93 1087 252 HOH HOH . I 3 HOH B 94 1088 253 HOH HOH . I 3 HOH B 95 1089 255 HOH HOH . I 3 HOH B 96 1090 257 HOH HOH . I 3 HOH B 97 1091 258 HOH HOH . I 3 HOH B 98 1092 318 HOH HOH . I 3 HOH B 99 1093 344 HOH HOH . I 3 HOH B 100 1094 364 HOH HOH . I 3 HOH B 101 1095 381 HOH HOH . I 3 HOH B 102 1096 423 HOH HOH . I 3 HOH B 103 1097 463 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DIO . . . F 2 -53.907 -1.298 2.458 1 91.33 ? C1 DIO 901 B 1 HETATM 2 C C2 DIO . . . F 2 -52.663 -2.883 1.304 1 91.55 ? C2 DIO 901 B 1 HETATM 3 C C1' DIO . . . F 2 -52.853 -0.235 2.134 1 91.21 ? C1' DIO 901 B 1 HETATM 4 C C2' DIO . . . F 2 -51.609 -1.818 0.983 1 91.23 ? C2' DIO 901 B 1 HETATM 5 O O1 DIO . . . F 2 -53.288 -2.585 2.556 1 91.62 ? O1 DIO 901 B 1 HETATM 6 O O1' DIO . . . F 2 -52.228 -0.531 0.883 1 90.85 ? O1' DIO 901 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #