data_3EV1
#
_model_server_result.job_id            D9bAbawgUZqCUuRghgRZbQ 
_model_server_result.datetime_utc      '2024-12-01 04:08:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ev1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":904}' 
#
_entry.id    3EV1 
#
_exptl.entry_id    3EV1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            HEXANE-1,6-DIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.6 
_cell.angle_gamma         90 
_cell.entry_id            3EV1 
_cell.length_a            100.598 
_cell.length_b            32.708 
_cell.length_c            73.413 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EV1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,G 1 1 
B,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf5 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf6 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf7 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf8 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                HEZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              HEXANE-1,6-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 HEZ sing 129 n n 
O1 HO1 HEZ sing 130 n n 
C1 C2 HEZ sing 131 n n 
C1 H11 HEZ sing 132 n n 
C1 H12 HEZ sing 133 n n 
C2 C3 HEZ sing 134 n n 
C2 H21 HEZ sing 135 n n 
C2 H22 HEZ sing 136 n n 
C3 C4 HEZ sing 137 n n 
C3 H31 HEZ sing 138 n n 
C3 H32 HEZ sing 139 n n 
C4 C5 HEZ sing 140 n n 
C4 H41 HEZ sing 141 n n 
C4 H42 HEZ sing 142 n n 
C5 C6 HEZ sing 143 n n 
C5 H51 HEZ sing 144 n n 
C5 H52 HEZ sing 145 n n 
C6 O6 HEZ sing 146 n n 
C6 H61 HEZ sing 147 n n 
C6 H62 HEZ sing 148 n n 
O6 HO6 HEZ sing 149 n n 
#
_atom_sites.entry_id                     3EV1 
_atom_sites.fract_transf_matrix[1][1]    0.009941 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000104 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030574 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013622 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEZ A 1 904 904 HEZ HEZ . 
D 2 HEZ A 1 915 915 HEZ HEZ . 
E 2 HEZ A 1 916 916 HEZ HEZ . 
F 2 HEZ B 1 994 994 HEZ HEZ . 
G 3 HOH A 1 917 4 HOH HOH . 
G 3 HOH A 2 918 5 HOH HOH . 
G 3 HOH A 3 919 6 HOH HOH . 
G 3 HOH A 4 920 8 HOH HOH . 
G 3 HOH A 5 921 9 HOH HOH . 
G 3 HOH A 6 922 10 HOH HOH . 
G 3 HOH A 7 923 15 HOH HOH . 
G 3 HOH A 8 924 16 HOH HOH . 
G 3 HOH A 9 925 17 HOH HOH . 
G 3 HOH A 10 926 19 HOH HOH . 
G 3 HOH A 11 927 20 HOH HOH . 
G 3 HOH A 12 928 21 HOH HOH . 
G 3 HOH A 13 929 22 HOH HOH . 
G 3 HOH A 14 930 23 HOH HOH . 
G 3 HOH A 15 931 26 HOH HOH . 
G 3 HOH A 16 932 31 HOH HOH . 
G 3 HOH A 17 933 35 HOH HOH . 
G 3 HOH A 18 934 40 HOH HOH . 
G 3 HOH A 19 935 44 HOH HOH . 
G 3 HOH A 20 936 54 HOH HOH . 
G 3 HOH A 21 937 55 HOH HOH . 
G 3 HOH A 22 938 59 HOH HOH . 
G 3 HOH A 23 939 67 HOH HOH . 
G 3 HOH A 24 940 69 HOH HOH . 
G 3 HOH A 25 941 71 HOH HOH . 
G 3 HOH A 26 942 72 HOH HOH . 
G 3 HOH A 27 943 74 HOH HOH . 
G 3 HOH A 28 944 75 HOH HOH . 
G 3 HOH A 29 945 78 HOH HOH . 
G 3 HOH A 30 946 82 HOH HOH . 
G 3 HOH A 31 947 103 HOH HOH . 
G 3 HOH A 32 948 125 HOH HOH . 
G 3 HOH A 33 949 126 HOH HOH . 
G 3 HOH A 34 950 127 HOH HOH . 
G 3 HOH A 35 951 131 HOH HOH . 
G 3 HOH A 36 952 136 HOH HOH . 
G 3 HOH A 37 953 137 HOH HOH . 
G 3 HOH A 38 954 144 HOH HOH . 
G 3 HOH A 39 955 177 HOH HOH . 
G 3 HOH A 40 956 181 HOH HOH . 
G 3 HOH A 41 957 201 HOH HOH . 
G 3 HOH A 42 958 212 HOH HOH . 
G 3 HOH A 43 959 221 HOH HOH . 
G 3 HOH A 44 960 223 HOH HOH . 
G 3 HOH A 45 961 242 HOH HOH . 
G 3 HOH A 46 962 249 HOH HOH . 
G 3 HOH A 47 963 256 HOH HOH . 
G 3 HOH A 48 964 261 HOH HOH . 
G 3 HOH A 49 965 262 HOH HOH . 
G 3 HOH A 50 966 336 HOH HOH . 
G 3 HOH A 51 967 337 HOH HOH . 
G 3 HOH A 52 968 338 HOH HOH . 
G 3 HOH A 53 969 339 HOH HOH . 
G 3 HOH A 54 970 340 HOH HOH . 
G 3 HOH A 55 971 341 HOH HOH . 
G 3 HOH A 56 972 342 HOH HOH . 
G 3 HOH A 57 973 343 HOH HOH . 
G 3 HOH A 58 974 344 HOH HOH . 
G 3 HOH A 59 975 345 HOH HOH . 
G 3 HOH A 60 976 346 HOH HOH . 
G 3 HOH A 61 977 347 HOH HOH . 
G 3 HOH A 62 978 348 HOH HOH . 
G 3 HOH A 63 979 349 HOH HOH . 
G 3 HOH A 64 980 350 HOH HOH . 
G 3 HOH A 65 981 351 HOH HOH . 
G 3 HOH A 66 982 352 HOH HOH . 
G 3 HOH A 67 983 353 HOH HOH . 
G 3 HOH A 68 984 354 HOH HOH . 
G 3 HOH A 69 985 355 HOH HOH . 
G 3 HOH A 70 986 356 HOH HOH . 
G 3 HOH A 71 987 357 HOH HOH . 
G 3 HOH A 72 988 358 HOH HOH . 
G 3 HOH A 73 989 359 HOH HOH . 
G 3 HOH A 74 990 360 HOH HOH . 
G 3 HOH A 75 991 392 HOH HOH . 
G 3 HOH A 76 992 402 HOH HOH . 
G 3 HOH A 77 993 423 HOH HOH . 
G 3 HOH A 78 994 106 HOH HOH . 
G 3 HOH A 79 1033 142 HOH HOH . 
H 3 HOH B 1 995 2 HOH HOH . 
H 3 HOH B 2 996 3 HOH HOH . 
H 3 HOH B 3 997 28 HOH HOH . 
H 3 HOH B 4 998 30 HOH HOH . 
H 3 HOH B 5 999 121 HOH HOH . 
H 3 HOH B 6 1000 217 HOH HOH . 
H 3 HOH B 7 1001 230 HOH HOH . 
H 3 HOH B 8 1002 318 HOH HOH . 
H 3 HOH B 9 1003 404 HOH HOH . 
H 3 HOH B 10 1004 2 HOH HOH . 
H 3 HOH B 11 1005 4 HOH HOH . 
H 3 HOH B 12 1006 6 HOH HOH . 
H 3 HOH B 13 1007 7 HOH HOH . 
H 3 HOH B 14 1008 10 HOH HOH . 
H 3 HOH B 15 1009 15 HOH HOH . 
H 3 HOH B 16 1010 16 HOH HOH . 
H 3 HOH B 17 1011 17 HOH HOH . 
H 3 HOH B 18 1012 19 HOH HOH . 
H 3 HOH B 19 1013 21 HOH HOH . 
H 3 HOH B 20 1014 22 HOH HOH . 
H 3 HOH B 21 1015 23 HOH HOH . 
H 3 HOH B 22 1016 26 HOH HOH . 
H 3 HOH B 23 1017 32 HOH HOH . 
H 3 HOH B 24 1018 35 HOH HOH . 
H 3 HOH B 25 1019 39 HOH HOH . 
H 3 HOH B 26 1020 41 HOH HOH . 
H 3 HOH B 27 1021 42 HOH HOH . 
H 3 HOH B 28 1022 44 HOH HOH . 
H 3 HOH B 29 1023 60 HOH HOH . 
H 3 HOH B 30 1024 63 HOH HOH . 
H 3 HOH B 31 1025 64 HOH HOH . 
H 3 HOH B 32 1026 67 HOH HOH . 
H 3 HOH B 33 1027 69 HOH HOH . 
H 3 HOH B 34 1028 73 HOH HOH . 
H 3 HOH B 35 1029 82 HOH HOH . 
H 3 HOH B 36 1030 89 HOH HOH . 
H 3 HOH B 37 1031 115 HOH HOH . 
H 3 HOH B 38 1032 123 HOH HOH . 
H 3 HOH B 39 1034 145 HOH HOH . 
H 3 HOH B 40 1035 150 HOH HOH . 
H 3 HOH B 41 1036 151 HOH HOH . 
H 3 HOH B 42 1037 153 HOH HOH . 
H 3 HOH B 43 1038 155 HOH HOH . 
H 3 HOH B 44 1039 163 HOH HOH . 
H 3 HOH B 45 1040 166 HOH HOH . 
H 3 HOH B 46 1041 167 HOH HOH . 
H 3 HOH B 47 1042 173 HOH HOH . 
H 3 HOH B 48 1043 181 HOH HOH . 
H 3 HOH B 49 1044 187 HOH HOH . 
H 3 HOH B 50 1045 189 HOH HOH . 
H 3 HOH B 51 1046 200 HOH HOH . 
H 3 HOH B 52 1047 214 HOH HOH . 
H 3 HOH B 53 1048 215 HOH HOH . 
H 3 HOH B 54 1049 216 HOH HOH . 
H 3 HOH B 55 1050 238 HOH HOH . 
H 3 HOH B 56 1051 239 HOH HOH . 
H 3 HOH B 57 1052 241 HOH HOH . 
H 3 HOH B 58 1053 243 HOH HOH . 
H 3 HOH B 59 1054 250 HOH HOH . 
H 3 HOH B 60 1055 256 HOH HOH . 
H 3 HOH B 61 1056 257 HOH HOH . 
H 3 HOH B 62 1057 264 HOH HOH . 
H 3 HOH B 63 1058 289 HOH HOH . 
H 3 HOH B 64 1059 291 HOH HOH . 
H 3 HOH B 65 1060 294 HOH HOH . 
H 3 HOH B 66 1061 295 HOH HOH . 
H 3 HOH B 67 1062 318 HOH HOH . 
H 3 HOH B 68 1063 333 HOH HOH . 
H 3 HOH B 69 1064 361 HOH HOH . 
H 3 HOH B 70 1065 362 HOH HOH . 
H 3 HOH B 71 1066 363 HOH HOH . 
H 3 HOH B 72 1067 364 HOH HOH . 
H 3 HOH B 73 1068 365 HOH HOH . 
H 3 HOH B 74 1069 366 HOH HOH . 
H 3 HOH B 75 1070 367 HOH HOH . 
H 3 HOH B 76 1071 368 HOH HOH . 
H 3 HOH B 77 1072 370 HOH HOH . 
H 3 HOH B 78 1073 371 HOH HOH . 
H 3 HOH B 79 1074 372 HOH HOH . 
H 3 HOH B 80 1075 373 HOH HOH . 
H 3 HOH B 81 1076 374 HOH HOH . 
H 3 HOH B 82 1077 375 HOH HOH . 
H 3 HOH B 83 1078 376 HOH HOH . 
H 3 HOH B 84 1079 377 HOH HOH . 
H 3 HOH B 85 1080 381 HOH HOH . 
H 3 HOH B 86 1081 397 HOH HOH . 
H 3 HOH B 87 1082 423 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 HEZ . . . C 2 -85.945 5.443 13.398 1 52.72 ? O1 HEZ 904 A 1 
HETATM 2 C C1 HEZ . . . C 2 -86.597 4.211 13.667 1 53.39 ? C1 HEZ 904 A 1 
HETATM 3 C C2 HEZ . . . C 2 -86.907 4.104 15.201 1 50.48 ? C2 HEZ 904 A 1 
HETATM 4 C C3 HEZ . . . C 2 -87.62 2.751 15.476 1 46.36 ? C3 HEZ 904 A 1 
HETATM 5 C C4 HEZ . . . C 2 -88.153 1.402 14.866 1 45.54 ? C4 HEZ 904 A 1 
HETATM 6 C C5 HEZ . . . C 2 -89.022 0.542 15.842 1 42.62 ? C5 HEZ 904 A 1 
HETATM 7 C C6 HEZ . . . C 2 -89.106 -0.929 15.418 1 40.44 ? C6 HEZ 904 A 1 
HETATM 8 O O6 HEZ . . . C 2 -88.741 -2.134 14.796 1 35.39 ? O6 HEZ 904 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           8 
#