data_3EW2
#
_model_server_result.job_id            Omlab0sTWfdyn2NNRppCsw 
_model_server_result.datetime_utc      '2024-12-23 02:35:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ew2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":500}' 
#
_entry.id    3EW2 
#
_exptl.entry_id    3EW2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              244.311 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BIOTIN 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3EW2 
_cell.length_a            45.654 
_cell.length_b            130.035 
_cell.length_c            237.555 
_cell.Z_PDB               56 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EW2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,H,I,O,P 1 1 
C,D,J,K,Q,R 2 1 
E,L,S 3 1,2 
F,G,M,N,T,U 4 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 118.7775 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 50 A CYS 50 1_555 A SG CYS 79 A CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
disulf ? disulf2 B SG CYS 50 B CYS 250 1_555 B SG CYS 79 B CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf3 C SG CYS 50 C CYS 50 1_555 C SG CYS 79 C CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf4 D SG CYS 50 D CYS 250 1_555 D SG CYS 79 D CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf5 E SG CYS 50 E CYS 50 1_555 E SG CYS 79 E CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf6 F SG CYS 50 F CYS 50 1_555 F SG CYS 79 F CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf7 G SG CYS 50 G CYS 250 1_555 G SG CYS 79 G CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
#
_chem_comp.formula           'C10 H16 N2 O3 S' 
_chem_comp.formula_weight    244.311 
_chem_comp.id                BTN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BIOTIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C11 O11 BTN doub 70 n n 
C11 O12 BTN sing 71 n n 
C11 C10 BTN sing 72 n n 
O12 HO2 BTN sing 73 n n 
C10 C9 BTN sing 74 n n 
C10 H101 BTN sing 75 n n 
C10 H102 BTN sing 76 n n 
C9 C8 BTN sing 77 n n 
C9 H91 BTN sing 78 n n 
C9 H92 BTN sing 79 n n 
C8 C7 BTN sing 80 n n 
C8 H81 BTN sing 81 n n 
C8 H82 BTN sing 82 n n 
C7 C2 BTN sing 83 n n 
C7 H71 BTN sing 84 n n 
C7 H72 BTN sing 85 n n 
C2 S1 BTN sing 86 n n 
C2 C4 BTN sing 87 n n 
C2 H2 BTN sing 88 n n 
S1 C6 BTN sing 89 n n 
C6 C5 BTN sing 90 n n 
C6 H61 BTN sing 91 n n 
C6 H62 BTN sing 92 n n 
C5 N1 BTN sing 93 n n 
C5 C4 BTN sing 94 n n 
C5 H5 BTN sing 95 n n 
N1 C3 BTN sing 96 n n 
N1 HN1 BTN sing 97 n n 
C3 O3 BTN doub 98 n n 
C3 N2 BTN sing 99 n n 
N2 C4 BTN sing 100 n n 
N2 HN2 BTN sing 101 n n 
C4 H4 BTN sing 102 n n 
#
_atom_sites.entry_id                     3EW2 
_atom_sites.fract_transf_matrix[1][1]    0.021904 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00769 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00421 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 BTN A 1 400 400 BTN BTN . 
I 2 BTN B 1 500 500 BTN BTN . 
J 2 BTN C 1 600 600 BTN BTN . 
K 2 BTN D 1 700 700 BTN BTN . 
L 2 BTN E 1 800 800 BTN BTN . 
M 2 BTN F 1 900 900 BTN BTN . 
N 2 BTN G 1 350 350 BTN BTN . 
O 3 HOH A 1 1016 1016 HOH HOH . 
O 3 HOH A 2 1017 1017 HOH HOH . 
O 3 HOH A 3 1020 1020 HOH HOH . 
O 3 HOH A 4 1030 1030 HOH HOH . 
O 3 HOH A 5 1032 1032 HOH HOH . 
O 3 HOH A 6 1038 1038 HOH HOH . 
O 3 HOH A 7 1042 1042 HOH HOH . 
O 3 HOH A 8 1043 1043 HOH HOH . 
O 3 HOH A 9 1049 1049 HOH HOH . 
O 3 HOH A 10 1051 1051 HOH HOH . 
O 3 HOH A 11 1053 1053 HOH HOH . 
O 3 HOH A 12 1058 1058 HOH HOH . 
O 3 HOH A 13 1060 1060 HOH HOH . 
O 3 HOH A 14 1077 1077 HOH HOH . 
O 3 HOH A 15 1079 1079 HOH HOH . 
O 3 HOH A 16 1087 1087 HOH HOH . 
O 3 HOH A 17 1088 1088 HOH HOH . 
O 3 HOH A 18 1094 1094 HOH HOH . 
O 3 HOH A 19 1100 1100 HOH HOH . 
O 3 HOH A 20 1122 1122 HOH HOH . 
P 3 HOH B 1 1002 1002 HOH HOH . 
P 3 HOH B 2 1003 1003 HOH HOH . 
P 3 HOH B 3 1004 1004 HOH HOH . 
P 3 HOH B 4 1011 1011 HOH HOH . 
P 3 HOH B 5 1015 1015 HOH HOH . 
P 3 HOH B 6 1022 1022 HOH HOH . 
P 3 HOH B 7 1026 1026 HOH HOH . 
P 3 HOH B 8 1027 1027 HOH HOH . 
P 3 HOH B 9 1033 1033 HOH HOH . 
P 3 HOH B 10 1035 1035 HOH HOH . 
P 3 HOH B 11 1041 1041 HOH HOH . 
P 3 HOH B 12 1045 1045 HOH HOH . 
P 3 HOH B 13 1054 1054 HOH HOH . 
P 3 HOH B 14 1056 1056 HOH HOH . 
P 3 HOH B 15 1057 1057 HOH HOH . 
P 3 HOH B 16 1062 1062 HOH HOH . 
P 3 HOH B 17 1070 1070 HOH HOH . 
P 3 HOH B 18 1071 1071 HOH HOH . 
P 3 HOH B 19 1074 1074 HOH HOH . 
P 3 HOH B 20 1078 1078 HOH HOH . 
P 3 HOH B 21 1082 1082 HOH HOH . 
P 3 HOH B 22 1084 1084 HOH HOH . 
P 3 HOH B 23 1091 1091 HOH HOH . 
P 3 HOH B 24 1092 1092 HOH HOH . 
P 3 HOH B 25 1097 1097 HOH HOH . 
P 3 HOH B 26 1099 1099 HOH HOH . 
P 3 HOH B 27 1110 1110 HOH HOH . 
P 3 HOH B 28 1111 1111 HOH HOH . 
P 3 HOH B 29 1118 1118 HOH HOH . 
P 3 HOH B 30 1119 1119 HOH HOH . 
Q 3 HOH C 1 1001 1001 HOH HOH . 
Q 3 HOH C 2 1010 1010 HOH HOH . 
Q 3 HOH C 3 1014 1014 HOH HOH . 
Q 3 HOH C 4 1021 1021 HOH HOH . 
Q 3 HOH C 5 1029 1029 HOH HOH . 
Q 3 HOH C 6 1034 1034 HOH HOH . 
Q 3 HOH C 7 1040 1040 HOH HOH . 
Q 3 HOH C 8 1064 1064 HOH HOH . 
Q 3 HOH C 9 1072 1072 HOH HOH . 
Q 3 HOH C 10 1076 1076 HOH HOH . 
Q 3 HOH C 11 1090 1090 HOH HOH . 
Q 3 HOH C 12 1095 1095 HOH HOH . 
Q 3 HOH C 13 1096 1096 HOH HOH . 
Q 3 HOH C 14 1102 1102 HOH HOH . 
Q 3 HOH C 15 1105 1105 HOH HOH . 
Q 3 HOH C 16 1106 1106 HOH HOH . 
Q 3 HOH C 17 1107 1107 HOH HOH . 
Q 3 HOH C 18 1108 1108 HOH HOH . 
Q 3 HOH C 19 1115 1115 HOH HOH . 
R 3 HOH D 1 1059 1059 HOH HOH . 
R 3 HOH D 2 1067 1067 HOH HOH . 
R 3 HOH D 3 1080 1080 HOH HOH . 
R 3 HOH D 4 1093 1093 HOH HOH . 
R 3 HOH D 5 1120 1120 HOH HOH . 
S 3 HOH E 1 1008 1008 HOH HOH . 
S 3 HOH E 2 1012 1012 HOH HOH . 
S 3 HOH E 3 1013 1013 HOH HOH . 
S 3 HOH E 4 1023 1023 HOH HOH . 
S 3 HOH E 5 1024 1024 HOH HOH . 
S 3 HOH E 6 1036 1036 HOH HOH . 
S 3 HOH E 7 1037 1037 HOH HOH . 
S 3 HOH E 8 1047 1047 HOH HOH . 
S 3 HOH E 9 1048 1048 HOH HOH . 
S 3 HOH E 10 1050 1050 HOH HOH . 
S 3 HOH E 11 1063 1063 HOH HOH . 
S 3 HOH E 12 1065 1065 HOH HOH . 
S 3 HOH E 13 1066 1066 HOH HOH . 
S 3 HOH E 14 1068 1068 HOH HOH . 
S 3 HOH E 15 1073 1073 HOH HOH . 
S 3 HOH E 16 1081 1081 HOH HOH . 
S 3 HOH E 17 1085 1085 HOH HOH . 
S 3 HOH E 18 1098 1098 HOH HOH . 
S 3 HOH E 19 1103 1103 HOH HOH . 
S 3 HOH E 20 1109 1109 HOH HOH . 
S 3 HOH E 21 1112 1112 HOH HOH . 
S 3 HOH E 22 1116 1116 HOH HOH . 
S 3 HOH E 23 1117 1117 HOH HOH . 
S 3 HOH E 24 1121 1121 HOH HOH . 
T 3 HOH F 1 1005 1005 HOH HOH . 
T 3 HOH F 2 1018 1018 HOH HOH . 
T 3 HOH F 3 1019 1019 HOH HOH . 
T 3 HOH F 4 1025 1025 HOH HOH . 
T 3 HOH F 5 1028 1028 HOH HOH . 
T 3 HOH F 6 1031 1031 HOH HOH . 
T 3 HOH F 7 1039 1039 HOH HOH . 
T 3 HOH F 8 1046 1046 HOH HOH . 
T 3 HOH F 9 1052 1052 HOH HOH . 
T 3 HOH F 10 1055 1055 HOH HOH . 
T 3 HOH F 11 1061 1061 HOH HOH . 
T 3 HOH F 12 1086 1086 HOH HOH . 
T 3 HOH F 13 1101 1101 HOH HOH . 
U 3 HOH G 1 1006 1006 HOH HOH . 
U 3 HOH G 2 1007 1007 HOH HOH . 
U 3 HOH G 3 1009 1009 HOH HOH . 
U 3 HOH G 4 1044 1044 HOH HOH . 
U 3 HOH G 5 1069 1069 HOH HOH . 
U 3 HOH G 6 1075 1075 HOH HOH . 
U 3 HOH G 7 1083 1083 HOH HOH . 
U 3 HOH G 8 1089 1089 HOH HOH . 
U 3 HOH G 9 1104 1104 HOH HOH . 
U 3 HOH G 10 1113 1113 HOH HOH . 
U 3 HOH G 11 1114 1114 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 BTN . . . I 2 23.674 70.934 10.476 1 36.15 ? C11 BTN 500 B 1 
HETATM 2 O O11 BTN . . . I 2 23.893 71.193 9.273 1 35.68 ? O11 BTN 500 B 1 
HETATM 3 O O12 BTN . . . I 2 24.345 71.517 11.354 1 34.79 ? O12 BTN 500 B 1 
HETATM 4 C C10 BTN . . . I 2 22.614 69.93 10.862 1 32.17 ? C10 BTN 500 B 1 
HETATM 5 C C9 BTN . . . I 2 21.616 69.779 9.72 1 29.74 ? C9 BTN 500 B 1 
HETATM 6 C C8 BTN . . . I 2 20.913 71.1 9.431 1 28.83 ? C8 BTN 500 B 1 
HETATM 7 C C7 BTN . . . I 2 19.523 70.864 8.852 1 31.62 ? C7 BTN 500 B 1 
HETATM 8 C C2 BTN . . . I 2 18.739 72.168 8.765 1 30.99 ? C2 BTN 500 B 1 
HETATM 9 S S1 BTN . . . I 2 17.812 72.355 10.142 1 30.3 ? S1 BTN 500 B 1 
HETATM 10 C C6 BTN . . . I 2 16.586 73.342 9.248 1 28.03 ? C6 BTN 500 B 1 
HETATM 11 C C5 BTN . . . I 2 16.591 72.975 7.774 1 27.44 ? C5 BTN 500 B 1 
HETATM 12 N N1 BTN . . . I 2 15.563 71.985 7.515 1 25.5 ? N1 BTN 500 B 1 
HETATM 13 C C3 BTN . . . I 2 16.083 70.81 7.186 1 26.24 ? C3 BTN 500 B 1 
HETATM 14 O O3 BTN . . . I 2 15.332 69.653 6.892 1 28.39 ? O3 BTN 500 B 1 
HETATM 15 N N2 BTN . . . I 2 17.407 70.876 7.173 1 24.58 ? N2 BTN 500 B 1 
HETATM 16 C C4 BTN . . . I 2 17.88 72.207 7.504 1 25.69 ? C4 BTN 500 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           519 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           16 
#