data_3EYW
#
_model_server_result.job_id            PUDuCEeyPCxWnNuBv91uNA 
_model_server_result.datetime_utc      '2025-03-09 02:32:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3eyw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2401}' 
#
_entry.id    3EYW 
#
_exptl.entry_id    3EYW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3EYW 
_cell.length_a            64.47 
_cell.length_b            85.015 
_cell.length_c            188.702 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3EYW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 I N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 291 n n 
PA O2A NAD sing 292 n n 
PA O5B NAD sing 293 n n 
PA O3 NAD sing 294 n n 
O2A HOA2 NAD sing 295 n n 
O5B C5B NAD sing 296 n n 
C5B C4B NAD sing 297 n n 
C5B H51A NAD sing 298 n n 
C5B H52A NAD sing 299 n n 
C4B O4B NAD sing 300 n n 
C4B C3B NAD sing 301 n n 
C4B H4B NAD sing 302 n n 
O4B C1B NAD sing 303 n n 
C3B O3B NAD sing 304 n n 
C3B C2B NAD sing 305 n n 
C3B H3B NAD sing 306 n n 
O3B HO3A NAD sing 307 n n 
C2B O2B NAD sing 308 n n 
C2B C1B NAD sing 309 n n 
C2B H2B NAD sing 310 n n 
O2B HO2A NAD sing 311 n n 
C1B N9A NAD sing 312 n n 
C1B H1B NAD sing 313 n n 
N9A C8A NAD sing 314 n y 
N9A C4A NAD sing 315 n y 
C8A N7A NAD doub 316 n y 
C8A H8A NAD sing 317 n n 
N7A C5A NAD sing 318 n y 
C5A C6A NAD sing 319 n y 
C5A C4A NAD doub 320 n y 
C6A N6A NAD sing 321 n n 
C6A N1A NAD doub 322 n y 
N6A H61A NAD sing 323 n n 
N6A H62A NAD sing 324 n n 
N1A C2A NAD sing 325 n y 
C2A N3A NAD doub 326 n y 
C2A H2A NAD sing 327 n n 
N3A C4A NAD sing 328 n y 
O3 PN NAD sing 329 n n 
PN O1N NAD doub 330 n n 
PN O2N NAD sing 331 n n 
PN O5D NAD sing 332 n n 
O5D C5D NAD sing 333 n n 
C5D C4D NAD sing 334 n n 
C5D H51N NAD sing 335 n n 
C5D H52N NAD sing 336 n n 
C4D O4D NAD sing 337 n n 
C4D C3D NAD sing 338 n n 
C4D H4D NAD sing 339 n n 
O4D C1D NAD sing 340 n n 
C3D O3D NAD sing 341 n n 
C3D C2D NAD sing 342 n n 
C3D H3D NAD sing 343 n n 
O3D HO3N NAD sing 344 n n 
C2D O2D NAD sing 345 n n 
C2D C1D NAD sing 346 n n 
C2D H2D NAD sing 347 n n 
O2D HO2N NAD sing 348 n n 
C1D N1N NAD sing 349 n n 
C1D H1D NAD sing 350 n n 
N1N C2N NAD sing 351 n y 
N1N C6N NAD doub 352 n y 
C2N C3N NAD doub 353 n y 
C2N H2N NAD sing 354 n n 
C3N C7N NAD sing 355 n n 
C3N C4N NAD sing 356 n y 
C7N O7N NAD doub 357 n n 
C7N N7N NAD sing 358 n n 
N7N H71N NAD sing 359 n n 
N7N H72N NAD sing 360 n n 
C4N C5N NAD doub 361 n y 
C4N H4N NAD sing 362 n n 
C5N C6N NAD sing 363 n y 
C5N H5N NAD sing 364 n n 
C6N H6N NAD sing 365 n n 
#
_atom_sites.entry_id                     3EYW 
_atom_sites.fract_transf_matrix[1][1]    0.015511 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011763 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005299 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 2400 2400 FMN FMN . 
D 3 NAD A 1 2401 2401 NAD NAD . 
E 4 MG A 1 2403 2403 MG MG . 
F 5 ZN A 1 2402 2402 ZN ZN . 
G 5 ZN B 1 2402 2402 ZN ZN . 
H 2 FMN B 1 2400 2400 FMN FMN . 
I 3 NAD B 1 2401 2401 NAD NAD . 
J 6 HOH A 1 5 5 HOH HOH . 
J 6 HOH A 2 9 9 HOH HOH . 
J 6 HOH A 3 13 13 HOH HOH . 
J 6 HOH A 4 14 14 HOH HOH . 
J 6 HOH A 5 15 15 HOH HOH . 
J 6 HOH A 6 16 16 HOH HOH . 
J 6 HOH A 7 18 18 HOH HOH . 
J 6 HOH A 8 23 23 HOH HOH . 
J 6 HOH A 9 24 24 HOH HOH . 
J 6 HOH A 10 27 27 HOH HOH . 
J 6 HOH A 11 28 28 HOH HOH . 
J 6 HOH A 12 31 31 HOH HOH . 
J 6 HOH A 13 36 36 HOH HOH . 
J 6 HOH A 14 38 38 HOH HOH . 
J 6 HOH A 15 42 42 HOH HOH . 
J 6 HOH A 16 44 44 HOH HOH . 
J 6 HOH A 17 45 45 HOH HOH . 
J 6 HOH A 18 51 51 HOH HOH . 
J 6 HOH A 19 52 52 HOH HOH . 
J 6 HOH A 20 53 53 HOH HOH . 
J 6 HOH A 21 54 54 HOH HOH . 
J 6 HOH A 22 55 55 HOH HOH . 
J 6 HOH A 23 56 56 HOH HOH . 
J 6 HOH A 24 57 57 HOH HOH . 
J 6 HOH A 25 58 58 HOH HOH . 
J 6 HOH A 26 62 62 HOH HOH . 
J 6 HOH A 27 63 63 HOH HOH . 
J 6 HOH A 28 65 65 HOH HOH . 
J 6 HOH A 29 68 68 HOH HOH . 
J 6 HOH A 30 69 69 HOH HOH . 
J 6 HOH A 31 72 72 HOH HOH . 
J 6 HOH A 32 73 73 HOH HOH . 
J 6 HOH A 33 74 74 HOH HOH . 
J 6 HOH A 34 78 78 HOH HOH . 
J 6 HOH A 35 79 79 HOH HOH . 
J 6 HOH A 36 80 80 HOH HOH . 
J 6 HOH A 37 81 81 HOH HOH . 
J 6 HOH A 38 82 82 HOH HOH . 
J 6 HOH A 39 85 85 HOH HOH . 
J 6 HOH A 40 87 87 HOH HOH . 
J 6 HOH A 41 89 89 HOH HOH . 
J 6 HOH A 42 92 92 HOH HOH . 
J 6 HOH A 43 93 93 HOH HOH . 
J 6 HOH A 44 95 95 HOH HOH . 
J 6 HOH A 45 99 99 HOH HOH . 
J 6 HOH A 46 101 101 HOH HOH . 
J 6 HOH A 47 106 106 HOH HOH . 
J 6 HOH A 48 109 109 HOH HOH . 
J 6 HOH A 49 111 111 HOH HOH . 
J 6 HOH A 50 114 114 HOH HOH . 
J 6 HOH A 51 115 115 HOH HOH . 
J 6 HOH A 52 123 123 HOH HOH . 
J 6 HOH A 53 125 125 HOH HOH . 
J 6 HOH A 54 127 127 HOH HOH . 
J 6 HOH A 55 133 133 HOH HOH . 
J 6 HOH A 56 134 134 HOH HOH . 
J 6 HOH A 57 135 135 HOH HOH . 
J 6 HOH A 58 137 137 HOH HOH . 
J 6 HOH A 59 138 138 HOH HOH . 
J 6 HOH A 60 139 139 HOH HOH . 
J 6 HOH A 61 140 140 HOH HOH . 
J 6 HOH A 62 141 141 HOH HOH . 
J 6 HOH A 63 143 143 HOH HOH . 
J 6 HOH A 64 144 144 HOH HOH . 
J 6 HOH A 65 145 145 HOH HOH . 
J 6 HOH A 66 146 146 HOH HOH . 
J 6 HOH A 67 149 149 HOH HOH . 
J 6 HOH A 68 150 150 HOH HOH . 
J 6 HOH A 69 153 153 HOH HOH . 
J 6 HOH A 70 155 155 HOH HOH . 
J 6 HOH A 71 158 158 HOH HOH . 
J 6 HOH A 72 159 159 HOH HOH . 
J 6 HOH A 73 160 160 HOH HOH . 
J 6 HOH A 74 161 161 HOH HOH . 
J 6 HOH A 75 163 163 HOH HOH . 
J 6 HOH A 76 165 165 HOH HOH . 
J 6 HOH A 77 167 167 HOH HOH . 
J 6 HOH A 78 168 168 HOH HOH . 
J 6 HOH A 79 169 169 HOH HOH . 
J 6 HOH A 80 171 171 HOH HOH . 
J 6 HOH A 81 172 172 HOH HOH . 
J 6 HOH A 82 176 176 HOH HOH . 
J 6 HOH A 83 179 179 HOH HOH . 
J 6 HOH A 84 180 180 HOH HOH . 
J 6 HOH A 85 181 181 HOH HOH . 
J 6 HOH A 86 183 183 HOH HOH . 
J 6 HOH A 87 184 184 HOH HOH . 
J 6 HOH A 88 186 186 HOH HOH . 
J 6 HOH A 89 187 187 HOH HOH . 
J 6 HOH A 90 190 190 HOH HOH . 
K 6 HOH B 1 6 6 HOH HOH . 
K 6 HOH B 2 7 7 HOH HOH . 
K 6 HOH B 3 10 10 HOH HOH . 
K 6 HOH B 4 11 11 HOH HOH . 
K 6 HOH B 5 12 12 HOH HOH . 
K 6 HOH B 6 17 17 HOH HOH . 
K 6 HOH B 7 19 19 HOH HOH . 
K 6 HOH B 8 20 20 HOH HOH . 
K 6 HOH B 9 21 21 HOH HOH . 
K 6 HOH B 10 22 22 HOH HOH . 
K 6 HOH B 11 25 25 HOH HOH . 
K 6 HOH B 12 26 26 HOH HOH . 
K 6 HOH B 13 29 29 HOH HOH . 
K 6 HOH B 14 30 30 HOH HOH . 
K 6 HOH B 15 32 32 HOH HOH . 
K 6 HOH B 16 33 33 HOH HOH . 
K 6 HOH B 17 34 34 HOH HOH . 
K 6 HOH B 18 35 35 HOH HOH . 
K 6 HOH B 19 37 37 HOH HOH . 
K 6 HOH B 20 39 39 HOH HOH . 
K 6 HOH B 21 40 40 HOH HOH . 
K 6 HOH B 22 41 41 HOH HOH . 
K 6 HOH B 23 43 43 HOH HOH . 
K 6 HOH B 24 46 46 HOH HOH . 
K 6 HOH B 25 47 47 HOH HOH . 
K 6 HOH B 26 48 48 HOH HOH . 
K 6 HOH B 27 49 49 HOH HOH . 
K 6 HOH B 28 50 50 HOH HOH . 
K 6 HOH B 29 59 59 HOH HOH . 
K 6 HOH B 30 60 60 HOH HOH . 
K 6 HOH B 31 61 61 HOH HOH . 
K 6 HOH B 32 64 64 HOH HOH . 
K 6 HOH B 33 67 67 HOH HOH . 
K 6 HOH B 34 70 70 HOH HOH . 
K 6 HOH B 35 75 75 HOH HOH . 
K 6 HOH B 36 76 76 HOH HOH . 
K 6 HOH B 37 77 77 HOH HOH . 
K 6 HOH B 38 83 83 HOH HOH . 
K 6 HOH B 39 84 84 HOH HOH . 
K 6 HOH B 40 86 86 HOH HOH . 
K 6 HOH B 41 88 88 HOH HOH . 
K 6 HOH B 42 90 90 HOH HOH . 
K 6 HOH B 43 94 94 HOH HOH . 
K 6 HOH B 44 96 96 HOH HOH . 
K 6 HOH B 45 97 97 HOH HOH . 
K 6 HOH B 46 98 98 HOH HOH . 
K 6 HOH B 47 100 100 HOH HOH . 
K 6 HOH B 48 102 102 HOH HOH . 
K 6 HOH B 49 103 103 HOH HOH . 
K 6 HOH B 50 104 104 HOH HOH . 
K 6 HOH B 51 105 105 HOH HOH . 
K 6 HOH B 52 107 107 HOH HOH . 
K 6 HOH B 53 108 108 HOH HOH . 
K 6 HOH B 54 110 110 HOH HOH . 
K 6 HOH B 55 112 112 HOH HOH . 
K 6 HOH B 56 113 113 HOH HOH . 
K 6 HOH B 57 116 116 HOH HOH . 
K 6 HOH B 58 117 117 HOH HOH . 
K 6 HOH B 59 120 120 HOH HOH . 
K 6 HOH B 60 121 121 HOH HOH . 
K 6 HOH B 61 122 122 HOH HOH . 
K 6 HOH B 62 124 124 HOH HOH . 
K 6 HOH B 63 128 128 HOH HOH . 
K 6 HOH B 64 129 129 HOH HOH . 
K 6 HOH B 65 130 130 HOH HOH . 
K 6 HOH B 66 131 131 HOH HOH . 
K 6 HOH B 67 132 132 HOH HOH . 
K 6 HOH B 68 136 136 HOH HOH . 
K 6 HOH B 69 142 142 HOH HOH . 
K 6 HOH B 70 147 147 HOH HOH . 
K 6 HOH B 71 148 148 HOH HOH . 
K 6 HOH B 72 151 151 HOH HOH . 
K 6 HOH B 73 152 152 HOH HOH . 
K 6 HOH B 74 154 154 HOH HOH . 
K 6 HOH B 75 156 156 HOH HOH . 
K 6 HOH B 76 157 157 HOH HOH . 
K 6 HOH B 77 162 162 HOH HOH . 
K 6 HOH B 78 164 164 HOH HOH . 
K 6 HOH B 79 166 166 HOH HOH . 
K 6 HOH B 80 170 170 HOH HOH . 
K 6 HOH B 81 173 173 HOH HOH . 
K 6 HOH B 82 174 174 HOH HOH . 
K 6 HOH B 83 175 175 HOH HOH . 
K 6 HOH B 84 177 177 HOH HOH . 
K 6 HOH B 85 178 178 HOH HOH . 
K 6 HOH B 86 182 182 HOH HOH . 
K 6 HOH B 87 185 185 HOH HOH . 
K 6 HOH B 88 188 188 HOH HOH . 
K 6 HOH B 89 189 189 HOH HOH . 
K 6 HOH B 90 191 191 HOH HOH . 
K 6 HOH B 91 192 192 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . D 3 -20.827 19.399 -9.251 1 16.78 ? PA NAD 2401 A 1 
HETATM 2 O O1A NAD . . . D 3 -20.112 18.449 -10.142 1 15.97 ? O1A NAD 2401 A 1 
HETATM 3 O O2A NAD . . . D 3 -21.838 18.705 -8.443 1 18.38 ? O2A NAD 2401 A 1 
HETATM 4 O O5B NAD . . . D 3 -19.835 20.101 -8.207 1 16.88 ? O5B NAD 2401 A 1 
HETATM 5 C C5B NAD . . . D 3 -18.581 20.61 -8.586 1 16.61 ? C5B NAD 2401 A 1 
HETATM 6 C C4B NAD . . . D 3 -17.492 20.121 -7.641 1 16.32 ? C4B NAD 2401 A 1 
HETATM 7 O O4B NAD . . . D 3 -16.263 20.763 -7.959 1 14.49 ? O4B NAD 2401 A 1 
HETATM 8 C C3B NAD . . . D 3 -17.824 20.45 -6.183 1 18.03 ? C3B NAD 2401 A 1 
HETATM 9 O O3B NAD . . . D 3 -17.728 19.276 -5.405 1 19.07 ? O3B NAD 2401 A 1 
HETATM 10 C C2B NAD . . . D 3 -16.755 21.45 -5.766 1 19.56 ? C2B NAD 2401 A 1 
HETATM 11 O O2B NAD . . . D 3 -16.297 21.258 -4.439 1 21.83 ? O2B NAD 2401 A 1 
HETATM 12 C C1B NAD . . . D 3 -15.636 21.111 -6.74 1 18.62 ? C1B NAD 2401 A 1 
HETATM 13 N N9A NAD . . . D 3 -14.742 22.246 -6.925 1 17.32 ? N9A NAD 2401 A 1 
HETATM 14 C C8A NAD . . . D 3 -15.089 23.506 -7.354 1 19.02 ? C8A NAD 2401 A 1 
HETATM 15 N N7A NAD . . . D 3 -13.949 24.246 -7.414 1 19.89 ? N7A NAD 2401 A 1 
HETATM 16 C C5A NAD . . . D 3 -12.911 23.454 -7.049 1 17.54 ? C5A NAD 2401 A 1 
HETATM 17 C C6A NAD . . . D 3 -11.553 23.698 -6.941 1 18.85 ? C6A NAD 2401 A 1 
HETATM 18 N N6A NAD . . . D 3 -11.095 24.945 -7.07 1 20.64 ? N6A NAD 2401 A 1 
HETATM 19 N N1A NAD . . . D 3 -10.711 22.681 -6.543 1 18.46 ? N1A NAD 2401 A 1 
HETATM 20 C C2A NAD . . . D 3 -11.208 21.421 -6.225 1 18.43 ? C2A NAD 2401 A 1 
HETATM 21 N N3A NAD . . . D 3 -12.577 21.198 -6.334 1 19.28 ? N3A NAD 2401 A 1 
HETATM 22 C C4A NAD . . . D 3 -13.401 22.198 -6.738 1 16.56 ? C4A NAD 2401 A 1 
HETATM 23 O O3 NAD . . . D 3 -21.422 20.6 -10.097 1 15.84 ? O3 NAD 2401 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#