data_3EZ1 # _model_server_result.job_id 40odCCmniTGw2BMF0a9vxw _model_server_result.datetime_utc '2024-11-05 00:41:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ez1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":423}' # _entry.id 3EZ1 # _exptl.entry_id 3EZ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.63 _cell.angle_gamma 90 _cell.entry_id 3EZ1 _cell.length_a 62.72 _cell.length_b 103.969 _cell.length_c 73.815 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EZ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 29 A ASN 28 1_555 A N MSE 30 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale2 A C MSE 30 A MSE 29 1_555 A N GLN 31 A GLN 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 A C ARG 56 A ARG 55 1_555 A N MSE 57 A MSE 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 A C MSE 57 A MSE 56 1_555 A N ASP 58 A ASP 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale5 A C LYS 126 A LYS 125 1_555 A N MSE 127 A MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MSE 127 A MSE 126 1_555 A N ILE 128 A ILE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 A C ASP 152 A ASP 151 1_555 A N MSE 153 A MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale8 A C MSE 153 A MSE 152 1_555 A N GLN 154 A GLN 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 A C LEU 307 A LEU 306 1_555 A N MSE 308 A MSE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale10 A C MSE 308 A MSE 307 1_555 A N ARG 309 A ARG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale11 A C ALA 404 A ALA 403 1_555 A N MSE 405 A MSE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale12 A C MSE 405 A MSE 404 1_555 A N GLN 406 A GLN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale13 B C ASN 29 B ASN 28 1_555 B N MSE 30 B MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale14 B C MSE 30 B MSE 29 1_555 B N GLN 31 B GLN 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale15 B C ARG 56 B ARG 55 1_555 B N MSE 57 B MSE 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale16 B C MSE 57 B MSE 56 1_555 B N ASP 58 B ASP 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale17 B C LYS 126 B LYS 125 1_555 B N MSE 127 B MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale18 B C MSE 127 B MSE 126 1_555 B N ILE 128 B ILE 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale19 B C ASP 152 B ASP 151 1_555 B N MSE 153 B MSE 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale20 B C MSE 153 B MSE 152 1_555 B N GLN 154 B GLN 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale21 B C LEU 307 B LEU 306 1_555 B N MSE 308 B MSE 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale22 B C MSE 308 B MSE 307 1_555 B N ARG 309 B ARG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale23 B C ALA 404 B ALA 403 1_555 B N MSE 405 B MSE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale24 B C MSE 405 B MSE 404 1_555 B N GLN 406 B GLN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3EZ1 _atom_sites.fract_transf_matrix[1][1] 0.015944 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006647 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009618 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 423 1 PO4 PO4 . D 2 PO4 B 1 423 2 PO4 PO4 . E 3 HOH A 1 424 3 HOH HOH . E 3 HOH A 2 425 4 HOH HOH . E 3 HOH A 3 426 5 HOH HOH . E 3 HOH A 4 427 6 HOH HOH . E 3 HOH A 5 428 7 HOH HOH . E 3 HOH A 6 429 8 HOH HOH . E 3 HOH A 7 430 9 HOH HOH . E 3 HOH A 8 431 10 HOH HOH . E 3 HOH A 9 432 11 HOH HOH . E 3 HOH A 10 433 12 HOH HOH . E 3 HOH A 11 434 13 HOH HOH . E 3 HOH A 12 435 14 HOH HOH . E 3 HOH A 13 436 15 HOH HOH . E 3 HOH A 14 437 16 HOH HOH . E 3 HOH A 15 438 17 HOH HOH . E 3 HOH A 16 439 18 HOH HOH . E 3 HOH A 17 440 19 HOH HOH . E 3 HOH A 18 441 20 HOH HOH . E 3 HOH A 19 442 21 HOH HOH . E 3 HOH A 20 443 22 HOH HOH . E 3 HOH A 21 444 23 HOH HOH . E 3 HOH A 22 445 24 HOH HOH . E 3 HOH A 23 446 25 HOH HOH . E 3 HOH A 24 447 26 HOH HOH . E 3 HOH A 25 448 27 HOH HOH . E 3 HOH A 26 449 28 HOH HOH . E 3 HOH A 27 450 29 HOH HOH . E 3 HOH A 28 451 30 HOH HOH . E 3 HOH A 29 452 31 HOH HOH . E 3 HOH A 30 453 32 HOH HOH . E 3 HOH A 31 454 33 HOH HOH . E 3 HOH A 32 455 34 HOH HOH . E 3 HOH A 33 456 35 HOH HOH . E 3 HOH A 34 457 36 HOH HOH . E 3 HOH A 35 458 37 HOH HOH . E 3 HOH A 36 459 38 HOH HOH . E 3 HOH A 37 460 39 HOH HOH . E 3 HOH A 38 461 40 HOH HOH . E 3 HOH A 39 462 41 HOH HOH . E 3 HOH A 40 463 42 HOH HOH . E 3 HOH A 41 464 43 HOH HOH . E 3 HOH A 42 465 44 HOH HOH . E 3 HOH A 43 466 45 HOH HOH . E 3 HOH A 44 467 46 HOH HOH . E 3 HOH A 45 468 47 HOH HOH . E 3 HOH A 46 469 48 HOH HOH . E 3 HOH A 47 470 49 HOH HOH . E 3 HOH A 48 471 50 HOH HOH . E 3 HOH A 49 472 51 HOH HOH . E 3 HOH A 50 473 52 HOH HOH . E 3 HOH A 51 474 53 HOH HOH . E 3 HOH A 52 475 54 HOH HOH . E 3 HOH A 53 476 55 HOH HOH . E 3 HOH A 54 477 56 HOH HOH . E 3 HOH A 55 478 57 HOH HOH . E 3 HOH A 56 479 58 HOH HOH . E 3 HOH A 57 480 59 HOH HOH . E 3 HOH A 58 481 60 HOH HOH . E 3 HOH A 59 482 61 HOH HOH . E 3 HOH A 60 483 62 HOH HOH . E 3 HOH A 61 484 63 HOH HOH . E 3 HOH A 62 485 64 HOH HOH . E 3 HOH A 63 486 65 HOH HOH . E 3 HOH A 64 487 66 HOH HOH . E 3 HOH A 65 488 67 HOH HOH . E 3 HOH A 66 489 68 HOH HOH . E 3 HOH A 67 490 69 HOH HOH . E 3 HOH A 68 491 70 HOH HOH . E 3 HOH A 69 492 71 HOH HOH . E 3 HOH A 70 493 72 HOH HOH . E 3 HOH A 71 494 73 HOH HOH . E 3 HOH A 72 495 74 HOH HOH . E 3 HOH A 73 496 75 HOH HOH . E 3 HOH A 74 497 76 HOH HOH . E 3 HOH A 75 498 77 HOH HOH . E 3 HOH A 76 499 78 HOH HOH . E 3 HOH A 77 500 79 HOH HOH . E 3 HOH A 78 501 80 HOH HOH . E 3 HOH A 79 502 81 HOH HOH . E 3 HOH A 80 503 82 HOH HOH . E 3 HOH A 81 504 83 HOH HOH . E 3 HOH A 82 505 84 HOH HOH . E 3 HOH A 83 506 85 HOH HOH . E 3 HOH A 84 507 86 HOH HOH . E 3 HOH A 85 508 87 HOH HOH . E 3 HOH A 86 509 88 HOH HOH . E 3 HOH A 87 510 89 HOH HOH . E 3 HOH A 88 511 90 HOH HOH . E 3 HOH A 89 512 91 HOH HOH . E 3 HOH A 90 513 92 HOH HOH . E 3 HOH A 91 514 93 HOH HOH . E 3 HOH A 92 515 94 HOH HOH . E 3 HOH A 93 516 95 HOH HOH . E 3 HOH A 94 517 96 HOH HOH . E 3 HOH A 95 518 97 HOH HOH . E 3 HOH A 96 519 98 HOH HOH . E 3 HOH A 97 520 99 HOH HOH . E 3 HOH A 98 521 100 HOH HOH . E 3 HOH A 99 522 101 HOH HOH . E 3 HOH A 100 523 102 HOH HOH . E 3 HOH A 101 524 103 HOH HOH . E 3 HOH A 102 525 104 HOH HOH . E 3 HOH A 103 526 105 HOH HOH . E 3 HOH A 104 527 106 HOH HOH . E 3 HOH A 105 528 107 HOH HOH . E 3 HOH A 106 529 108 HOH HOH . E 3 HOH A 107 530 109 HOH HOH . E 3 HOH A 108 531 110 HOH HOH . E 3 HOH A 109 532 111 HOH HOH . E 3 HOH A 110 533 112 HOH HOH . E 3 HOH A 111 534 113 HOH HOH . E 3 HOH A 112 535 114 HOH HOH . E 3 HOH A 113 536 115 HOH HOH . E 3 HOH A 114 537 116 HOH HOH . E 3 HOH A 115 538 117 HOH HOH . E 3 HOH A 116 539 118 HOH HOH . E 3 HOH A 117 540 119 HOH HOH . E 3 HOH A 118 541 120 HOH HOH . E 3 HOH A 119 542 121 HOH HOH . E 3 HOH A 120 543 122 HOH HOH . E 3 HOH A 121 544 123 HOH HOH . E 3 HOH A 122 545 124 HOH HOH . E 3 HOH A 123 546 125 HOH HOH . E 3 HOH A 124 547 126 HOH HOH . E 3 HOH A 125 548 127 HOH HOH . E 3 HOH A 126 549 128 HOH HOH . E 3 HOH A 127 550 129 HOH HOH . E 3 HOH A 128 551 130 HOH HOH . E 3 HOH A 129 552 131 HOH HOH . E 3 HOH A 130 553 132 HOH HOH . E 3 HOH A 131 554 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 28.624 61.383 47.022 1 48.38 ? P PO4 423 A 1 HETATM 2 O O1 PO4 . . . C 2 29.07 60.875 45.671 1 47.29 ? O1 PO4 423 A 1 HETATM 3 O O2 PO4 . . . C 2 27.143 61.133 47.207 1 45.34 ? O2 PO4 423 A 1 HETATM 4 O O3 PO4 . . . C 2 29.388 60.664 48.112 1 46.05 ? O3 PO4 423 A 1 HETATM 5 O O4 PO4 . . . C 2 28.905 62.865 47.103 1 45.27 ? O4 PO4 423 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #