data_3EZQ # _model_server_result.job_id iDdzChRP16orVeu10VwwcA _model_server_result.datetime_utc '2024-10-25 20:25:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ezq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":14}' # _entry.id 3EZQ # _exptl.entry_id 3EZQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3EZQ _cell.length_a 126.218 _cell.length_b 126.218 _cell.length_c 299.274 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EZQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 PISA tetrameric 4 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,Q,R,S,T,KA,LA,MA,NA 1 1 E,F,G,H,U,V,W,X,Y,OA,PA,QA,RA 2 1 I,J,K,L,Z,AA,BA,CA,DA,EA,SA,TA,UA,VA 3 1 M,N,O,P,FA,GA,HA,IA,JA,WA,XA,YA,ZA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 R N N ? 4 S N N ? 4 W N N ? 4 Y N N ? 4 BA N N ? 4 EA N N ? 4 HA N N ? 4 JA N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3EZQ _atom_sites.fract_transf_matrix[1][1] 0.007923 _atom_sites.fract_transf_matrix[1][2] 0.004574 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 3 SO4 A 1 10 10 SO4 SO4 . R 4 NA A 1 15 15 NA NA . S 4 NA B 1 21 21 NA NA . T 3 SO4 C 1 7 7 SO4 SO4 . U 3 SO4 E 1 1 1 SO4 SO4 . V 3 SO4 E 1 11 11 SO4 SO4 . W 4 NA E 1 14 14 NA NA . X 3 SO4 G 1 2 2 SO4 SO4 . Y 4 NA H 1 20 20 NA NA . Z 3 SO4 I 1 6 6 SO4 SO4 . AA 3 SO4 J 1 8 8 SO4 SO4 . BA 4 NA J 1 19 19 NA NA . CA 3 SO4 K 1 3 3 SO4 SO4 . DA 3 SO4 K 1 13 13 SO4 SO4 . EA 4 NA K 1 16 16 NA NA . FA 3 SO4 M 1 9 9 SO4 SO4 . GA 3 SO4 M 1 12 12 SO4 SO4 . HA 4 NA M 1 17 17 NA NA . IA 3 SO4 O 1 4 4 SO4 SO4 . JA 4 NA P 1 18 18 NA NA . KA 5 HOH A 1 7 7 HOH HOH . KA 5 HOH A 2 64 64 HOH HOH . KA 5 HOH A 3 78 78 HOH HOH . KA 5 HOH A 4 86 86 HOH HOH . KA 5 HOH A 5 89 89 HOH HOH . KA 5 HOH A 6 208 208 HOH HOH . KA 5 HOH A 7 340 340 HOH HOH . LA 5 HOH B 1 4 4 HOH HOH . LA 5 HOH B 2 215 215 HOH HOH . MA 5 HOH C 1 2 2 HOH HOH . MA 5 HOH C 2 21 21 HOH HOH . MA 5 HOH C 3 34 34 HOH HOH . MA 5 HOH C 4 44 44 HOH HOH . MA 5 HOH C 5 68 68 HOH HOH . MA 5 HOH C 6 199 199 HOH HOH . MA 5 HOH C 7 215 215 HOH HOH . MA 5 HOH C 8 219 219 HOH HOH . NA 5 HOH D 1 26 26 HOH HOH . NA 5 HOH D 2 29 29 HOH HOH . NA 5 HOH D 3 74 74 HOH HOH . NA 5 HOH D 4 220 220 HOH HOH . OA 5 HOH E 1 9 9 HOH HOH . OA 5 HOH E 2 41 41 HOH HOH . OA 5 HOH E 3 46 46 HOH HOH . OA 5 HOH E 4 56 56 HOH HOH . OA 5 HOH E 5 79 79 HOH HOH . OA 5 HOH E 6 193 193 HOH HOH . OA 5 HOH E 7 194 194 HOH HOH . OA 5 HOH E 8 218 218 HOH HOH . OA 5 HOH E 9 341 341 HOH HOH . PA 5 HOH F 1 32 32 HOH HOH . PA 5 HOH F 2 38 38 HOH HOH . PA 5 HOH F 3 39 39 HOH HOH . PA 5 HOH F 4 215 215 HOH HOH . QA 5 HOH G 1 6 6 HOH HOH . QA 5 HOH G 2 28 28 HOH HOH . QA 5 HOH G 3 53 53 HOH HOH . QA 5 HOH G 4 55 55 HOH HOH . QA 5 HOH G 5 88 88 HOH HOH . QA 5 HOH G 6 203 203 HOH HOH . QA 5 HOH G 7 206 206 HOH HOH . QA 5 HOH G 8 209 209 HOH HOH . QA 5 HOH G 9 212 212 HOH HOH . QA 5 HOH G 10 343 343 HOH HOH . QA 5 HOH G 11 344 344 HOH HOH . RA 5 HOH H 1 19 19 HOH HOH . RA 5 HOH H 2 22 22 HOH HOH . RA 5 HOH H 3 35 35 HOH HOH . RA 5 HOH H 4 52 52 HOH HOH . RA 5 HOH H 5 87 87 HOH HOH . RA 5 HOH H 6 215 215 HOH HOH . RA 5 HOH H 7 216 216 HOH HOH . RA 5 HOH H 8 221 221 HOH HOH . SA 5 HOH I 1 11 11 HOH HOH . SA 5 HOH I 2 71 71 HOH HOH . SA 5 HOH I 3 72 72 HOH HOH . SA 5 HOH I 4 73 73 HOH HOH . SA 5 HOH I 5 93 93 HOH HOH . SA 5 HOH I 6 94 94 HOH HOH . SA 5 HOH I 7 95 95 HOH HOH . SA 5 HOH I 8 96 96 HOH HOH . SA 5 HOH I 9 97 97 HOH HOH . SA 5 HOH I 10 98 98 HOH HOH . SA 5 HOH I 11 100 100 HOH HOH . SA 5 HOH I 12 101 101 HOH HOH . SA 5 HOH I 13 103 103 HOH HOH . SA 5 HOH I 14 104 104 HOH HOH . SA 5 HOH I 15 105 105 HOH HOH . SA 5 HOH I 16 106 106 HOH HOH . SA 5 HOH I 17 107 107 HOH HOH . SA 5 HOH I 18 110 110 HOH HOH . SA 5 HOH I 19 112 112 HOH HOH . SA 5 HOH I 20 113 113 HOH HOH . SA 5 HOH I 21 114 114 HOH HOH . SA 5 HOH I 22 116 116 HOH HOH . SA 5 HOH I 23 118 118 HOH HOH . SA 5 HOH I 24 119 119 HOH HOH . SA 5 HOH I 25 120 120 HOH HOH . SA 5 HOH I 26 121 121 HOH HOH . SA 5 HOH I 27 122 122 HOH HOH . SA 5 HOH I 28 124 124 HOH HOH . SA 5 HOH I 29 125 125 HOH HOH . SA 5 HOH I 30 126 126 HOH HOH . SA 5 HOH I 31 127 127 HOH HOH . SA 5 HOH I 32 128 128 HOH HOH . SA 5 HOH I 33 129 129 HOH HOH . SA 5 HOH I 34 130 130 HOH HOH . SA 5 HOH I 35 132 132 HOH HOH . SA 5 HOH I 36 133 133 HOH HOH . SA 5 HOH I 37 135 135 HOH HOH . SA 5 HOH I 38 137 137 HOH HOH . SA 5 HOH I 39 138 138 HOH HOH . SA 5 HOH I 40 139 139 HOH HOH . SA 5 HOH I 41 140 140 HOH HOH . SA 5 HOH I 42 142 142 HOH HOH . SA 5 HOH I 43 143 143 HOH HOH . SA 5 HOH I 44 145 145 HOH HOH . SA 5 HOH I 45 148 148 HOH HOH . SA 5 HOH I 46 149 149 HOH HOH . SA 5 HOH I 47 150 150 HOH HOH . SA 5 HOH I 48 151 151 HOH HOH . SA 5 HOH I 49 152 152 HOH HOH . SA 5 HOH I 50 153 153 HOH HOH . SA 5 HOH I 51 154 154 HOH HOH . SA 5 HOH I 52 155 155 HOH HOH . SA 5 HOH I 53 156 156 HOH HOH . SA 5 HOH I 54 157 157 HOH HOH . SA 5 HOH I 55 158 158 HOH HOH . SA 5 HOH I 56 159 159 HOH HOH . SA 5 HOH I 57 160 160 HOH HOH . SA 5 HOH I 58 162 162 HOH HOH . SA 5 HOH I 59 164 164 HOH HOH . SA 5 HOH I 60 165 165 HOH HOH . SA 5 HOH I 61 167 167 HOH HOH . SA 5 HOH I 62 168 168 HOH HOH . SA 5 HOH I 63 169 169 HOH HOH . SA 5 HOH I 64 170 170 HOH HOH . SA 5 HOH I 65 171 171 HOH HOH . SA 5 HOH I 66 174 174 HOH HOH . SA 5 HOH I 67 175 175 HOH HOH . SA 5 HOH I 68 176 176 HOH HOH . SA 5 HOH I 69 178 178 HOH HOH . SA 5 HOH I 70 179 179 HOH HOH . SA 5 HOH I 71 181 181 HOH HOH . SA 5 HOH I 72 182 182 HOH HOH . SA 5 HOH I 73 183 183 HOH HOH . SA 5 HOH I 74 184 184 HOH HOH . SA 5 HOH I 75 186 186 HOH HOH . SA 5 HOH I 76 187 187 HOH HOH . SA 5 HOH I 77 188 188 HOH HOH . SA 5 HOH I 78 189 189 HOH HOH . SA 5 HOH I 79 190 190 HOH HOH . SA 5 HOH I 80 191 191 HOH HOH . SA 5 HOH I 81 196 196 HOH HOH . SA 5 HOH I 82 205 205 HOH HOH . SA 5 HOH I 83 338 338 HOH HOH . SA 5 HOH I 84 339 339 HOH HOH . TA 5 HOH J 1 13 13 HOH HOH . TA 5 HOH J 2 30 30 HOH HOH . TA 5 HOH J 3 31 31 HOH HOH . TA 5 HOH J 4 47 47 HOH HOH . TA 5 HOH J 5 50 50 HOH HOH . TA 5 HOH J 6 63 63 HOH HOH . TA 5 HOH J 7 83 83 HOH HOH . TA 5 HOH J 8 215 215 HOH HOH . UA 5 HOH K 1 10 10 HOH HOH . UA 5 HOH K 2 12 12 HOH HOH . UA 5 HOH K 3 49 49 HOH HOH . UA 5 HOH K 4 81 81 HOH HOH . UA 5 HOH K 5 201 201 HOH HOH . UA 5 HOH K 6 338 338 HOH HOH . VA 5 HOH L 1 20 20 HOH HOH . VA 5 HOH L 2 45 45 HOH HOH . VA 5 HOH L 3 48 48 HOH HOH . VA 5 HOH L 4 76 76 HOH HOH . VA 5 HOH L 5 90 90 HOH HOH . VA 5 HOH L 6 215 215 HOH HOH . VA 5 HOH L 7 342 342 HOH HOH . WA 5 HOH M 1 3 3 HOH HOH . WA 5 HOH M 2 23 23 HOH HOH . WA 5 HOH M 3 27 27 HOH HOH . WA 5 HOH M 4 37 37 HOH HOH . WA 5 HOH M 5 92 92 HOH HOH . WA 5 HOH M 6 192 192 HOH HOH . WA 5 HOH M 7 195 195 HOH HOH . WA 5 HOH M 8 216 216 HOH HOH . WA 5 HOH M 9 222 222 HOH HOH . XA 5 HOH N 1 14 14 HOH HOH . XA 5 HOH N 2 40 40 HOH HOH . XA 5 HOH N 3 82 82 HOH HOH . YA 5 HOH O 1 8 8 HOH HOH . YA 5 HOH O 2 42 42 HOH HOH . YA 5 HOH O 3 43 43 HOH HOH . YA 5 HOH O 4 77 77 HOH HOH . YA 5 HOH O 5 214 214 HOH HOH . ZA 5 HOH P 1 61 61 HOH HOH . ZA 5 HOH P 2 217 217 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id W _atom_site.label_entity_id 4 _atom_site.Cartn_x -59.84 _atom_site.Cartn_y 3.265 _atom_site.Cartn_z -49.27 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 63.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 14 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #