data_3EZU # _model_server_result.job_id EEDoHfujua7Q6G6TSAQo_A _model_server_result.datetime_utc '2024-11-13 06:40:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ezu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":345}' # _entry.id 3EZU # _exptl.entry_id 3EZU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3EZU _cell.length_a 74.55 _cell.length_b 76.367 _cell.length_c 64.191 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3EZU _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 149.1 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C MSE 2 A MSE 1 1_555 A N SER 3 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale3 A C LYS 26 A LYS 25 1_555 A N MSE 27 A MSE 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 A C MSE 27 A MSE 26 1_555 A N PHE 28 A PHE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale5 A C GLU 82 A GLU 81 1_555 A N MSE 83 A MSE 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 83 A MSE 82 1_555 A N ILE 84 A ILE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C VAL 190 A VAL 189 1_555 A N MSE 191 A MSE 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale8 A C MSE 191 A MSE 190 1_555 A N THR 192 A THR 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 A C ILE 216 A ILE 215 1_555 A N MSE 217 A MSE 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 217 A MSE 216 1_555 A N LEU 218 A LEU 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 A C ARG 294 A ARG 293 1_555 A N MSE 295 A MSE 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 A C MSE 295 A MSE 294 1_555 A N VAL 296 A VAL 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 A C LEU 328 A LEU 327 1_555 A N MSE 329 A MSE 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale14 A C MSE 329 A MSE 328 1_555 A N GLN 330 A GLN 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 3EZU _atom_sites.fract_transf_matrix[1][1] 0.013414 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013095 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015578 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNL A 1 342 1 UNL UNL . C 3 EDO A 1 343 2 EDO EDO . D 3 EDO A 1 344 3 EDO EDO . E 3 EDO A 1 345 4 EDO EDO . F 4 HOH A 1 346 5 HOH HOH . F 4 HOH A 2 347 6 HOH HOH . F 4 HOH A 3 348 7 HOH HOH . F 4 HOH A 4 349 8 HOH HOH . F 4 HOH A 5 350 9 HOH HOH . F 4 HOH A 6 351 10 HOH HOH . F 4 HOH A 7 352 11 HOH HOH . F 4 HOH A 8 353 12 HOH HOH . F 4 HOH A 9 354 13 HOH HOH . F 4 HOH A 10 355 14 HOH HOH . F 4 HOH A 11 356 15 HOH HOH . F 4 HOH A 12 357 16 HOH HOH . F 4 HOH A 13 358 17 HOH HOH . F 4 HOH A 14 359 18 HOH HOH . F 4 HOH A 15 360 19 HOH HOH . F 4 HOH A 16 361 20 HOH HOH . F 4 HOH A 17 362 21 HOH HOH . F 4 HOH A 18 363 22 HOH HOH . F 4 HOH A 19 364 23 HOH HOH . F 4 HOH A 20 365 24 HOH HOH . F 4 HOH A 21 366 25 HOH HOH . F 4 HOH A 22 367 26 HOH HOH . F 4 HOH A 23 368 27 HOH HOH . F 4 HOH A 24 369 28 HOH HOH . F 4 HOH A 25 370 29 HOH HOH . F 4 HOH A 26 371 30 HOH HOH . F 4 HOH A 27 372 31 HOH HOH . F 4 HOH A 28 373 32 HOH HOH . F 4 HOH A 29 374 33 HOH HOH . F 4 HOH A 30 375 34 HOH HOH . F 4 HOH A 31 376 35 HOH HOH . F 4 HOH A 32 377 36 HOH HOH . F 4 HOH A 33 378 37 HOH HOH . F 4 HOH A 34 379 38 HOH HOH . F 4 HOH A 35 380 39 HOH HOH . F 4 HOH A 36 381 40 HOH HOH . F 4 HOH A 37 382 41 HOH HOH . F 4 HOH A 38 383 42 HOH HOH . F 4 HOH A 39 384 43 HOH HOH . F 4 HOH A 40 385 44 HOH HOH . F 4 HOH A 41 386 45 HOH HOH . F 4 HOH A 42 387 46 HOH HOH . F 4 HOH A 43 388 47 HOH HOH . F 4 HOH A 44 389 48 HOH HOH . F 4 HOH A 45 390 49 HOH HOH . F 4 HOH A 46 391 50 HOH HOH . F 4 HOH A 47 392 51 HOH HOH . F 4 HOH A 48 393 52 HOH HOH . F 4 HOH A 49 394 53 HOH HOH . F 4 HOH A 50 395 54 HOH HOH . F 4 HOH A 51 396 55 HOH HOH . F 4 HOH A 52 397 56 HOH HOH . F 4 HOH A 53 398 57 HOH HOH . F 4 HOH A 54 399 58 HOH HOH . F 4 HOH A 55 400 59 HOH HOH . F 4 HOH A 56 401 60 HOH HOH . F 4 HOH A 57 402 61 HOH HOH . F 4 HOH A 58 403 62 HOH HOH . F 4 HOH A 59 404 63 HOH HOH . F 4 HOH A 60 405 64 HOH HOH . F 4 HOH A 61 406 65 HOH HOH . F 4 HOH A 62 407 66 HOH HOH . F 4 HOH A 63 408 67 HOH HOH . F 4 HOH A 64 409 68 HOH HOH . F 4 HOH A 65 410 69 HOH HOH . F 4 HOH A 66 411 70 HOH HOH . F 4 HOH A 67 412 71 HOH HOH . F 4 HOH A 68 413 72 HOH HOH . F 4 HOH A 69 414 73 HOH HOH . F 4 HOH A 70 415 74 HOH HOH . F 4 HOH A 71 416 75 HOH HOH . F 4 HOH A 72 417 76 HOH HOH . F 4 HOH A 73 418 77 HOH HOH . F 4 HOH A 74 419 78 HOH HOH . F 4 HOH A 75 420 79 HOH HOH . F 4 HOH A 76 421 80 HOH HOH . F 4 HOH A 77 422 81 HOH HOH . F 4 HOH A 78 423 82 HOH HOH . F 4 HOH A 79 424 83 HOH HOH . F 4 HOH A 80 425 84 HOH HOH . F 4 HOH A 81 426 85 HOH HOH . F 4 HOH A 82 427 86 HOH HOH . F 4 HOH A 83 428 87 HOH HOH . F 4 HOH A 84 429 88 HOH HOH . F 4 HOH A 85 430 89 HOH HOH . F 4 HOH A 86 431 90 HOH HOH . F 4 HOH A 87 432 91 HOH HOH . F 4 HOH A 88 433 92 HOH HOH . F 4 HOH A 89 434 93 HOH HOH . F 4 HOH A 90 435 94 HOH HOH . F 4 HOH A 91 436 95 HOH HOH . F 4 HOH A 92 437 96 HOH HOH . F 4 HOH A 93 438 97 HOH HOH . F 4 HOH A 94 439 98 HOH HOH . F 4 HOH A 95 440 99 HOH HOH . F 4 HOH A 96 441 100 HOH HOH . F 4 HOH A 97 442 101 HOH HOH . F 4 HOH A 98 443 102 HOH HOH . F 4 HOH A 99 444 103 HOH HOH . F 4 HOH A 100 445 104 HOH HOH . F 4 HOH A 101 446 105 HOH HOH . F 4 HOH A 102 447 106 HOH HOH . F 4 HOH A 103 448 107 HOH HOH . F 4 HOH A 104 449 108 HOH HOH . F 4 HOH A 105 450 109 HOH HOH . F 4 HOH A 106 451 110 HOH HOH . F 4 HOH A 107 452 111 HOH HOH . F 4 HOH A 108 453 112 HOH HOH . F 4 HOH A 109 454 113 HOH HOH . F 4 HOH A 110 455 114 HOH HOH . F 4 HOH A 111 456 115 HOH HOH . F 4 HOH A 112 457 116 HOH HOH . F 4 HOH A 113 458 117 HOH HOH . F 4 HOH A 114 459 118 HOH HOH . F 4 HOH A 115 460 119 HOH HOH . F 4 HOH A 116 461 120 HOH HOH . F 4 HOH A 117 462 121 HOH HOH . F 4 HOH A 118 463 122 HOH HOH . F 4 HOH A 119 464 123 HOH HOH . F 4 HOH A 120 465 124 HOH HOH . F 4 HOH A 121 466 125 HOH HOH . F 4 HOH A 122 467 126 HOH HOH . F 4 HOH A 123 468 127 HOH HOH . F 4 HOH A 124 469 128 HOH HOH . F 4 HOH A 125 470 129 HOH HOH . F 4 HOH A 126 471 130 HOH HOH . F 4 HOH A 127 472 131 HOH HOH . F 4 HOH A 128 473 132 HOH HOH . F 4 HOH A 129 474 133 HOH HOH . F 4 HOH A 130 475 134 HOH HOH . F 4 HOH A 131 476 135 HOH HOH . F 4 HOH A 132 477 136 HOH HOH . F 4 HOH A 133 478 137 HOH HOH . F 4 HOH A 134 479 138 HOH HOH . F 4 HOH A 135 480 139 HOH HOH . F 4 HOH A 136 481 140 HOH HOH . F 4 HOH A 137 482 141 HOH HOH . F 4 HOH A 138 483 142 HOH HOH . F 4 HOH A 139 484 143 HOH HOH . F 4 HOH A 140 485 144 HOH HOH . F 4 HOH A 141 486 145 HOH HOH . F 4 HOH A 142 487 146 HOH HOH . F 4 HOH A 143 488 147 HOH HOH . F 4 HOH A 144 489 148 HOH HOH . F 4 HOH A 145 490 149 HOH HOH . F 4 HOH A 146 491 150 HOH HOH . F 4 HOH A 147 492 151 HOH HOH . F 4 HOH A 148 493 152 HOH HOH . F 4 HOH A 149 494 153 HOH HOH . F 4 HOH A 150 495 154 HOH HOH . F 4 HOH A 151 496 155 HOH HOH . F 4 HOH A 152 497 156 HOH HOH . F 4 HOH A 153 498 157 HOH HOH . F 4 HOH A 154 499 158 HOH HOH . F 4 HOH A 155 500 159 HOH HOH . F 4 HOH A 156 501 160 HOH HOH . F 4 HOH A 157 502 161 HOH HOH . F 4 HOH A 158 503 162 HOH HOH . F 4 HOH A 159 504 163 HOH HOH . F 4 HOH A 160 505 164 HOH HOH . F 4 HOH A 161 506 165 HOH HOH . F 4 HOH A 162 507 166 HOH HOH . F 4 HOH A 163 508 167 HOH HOH . F 4 HOH A 164 509 168 HOH HOH . F 4 HOH A 165 510 169 HOH HOH . F 4 HOH A 166 511 170 HOH HOH . F 4 HOH A 167 512 171 HOH HOH . F 4 HOH A 168 513 172 HOH HOH . F 4 HOH A 169 514 173 HOH HOH . F 4 HOH A 170 515 174 HOH HOH . F 4 HOH A 171 516 175 HOH HOH . F 4 HOH A 172 517 176 HOH HOH . F 4 HOH A 173 518 177 HOH HOH . F 4 HOH A 174 519 178 HOH HOH . F 4 HOH A 175 520 179 HOH HOH . F 4 HOH A 176 521 180 HOH HOH . F 4 HOH A 177 522 181 HOH HOH . F 4 HOH A 178 523 182 HOH HOH . F 4 HOH A 179 524 183 HOH HOH . F 4 HOH A 180 525 184 HOH HOH . F 4 HOH A 181 526 185 HOH HOH . F 4 HOH A 182 527 186 HOH HOH . F 4 HOH A 183 528 187 HOH HOH . F 4 HOH A 184 529 188 HOH HOH . F 4 HOH A 185 530 189 HOH HOH . F 4 HOH A 186 531 190 HOH HOH . F 4 HOH A 187 532 191 HOH HOH . F 4 HOH A 188 533 192 HOH HOH . F 4 HOH A 189 534 193 HOH HOH . F 4 HOH A 190 535 194 HOH HOH . F 4 HOH A 191 536 195 HOH HOH . F 4 HOH A 192 537 196 HOH HOH . F 4 HOH A 193 538 197 HOH HOH . F 4 HOH A 194 539 198 HOH HOH . F 4 HOH A 195 540 199 HOH HOH . F 4 HOH A 196 541 200 HOH HOH . F 4 HOH A 197 542 201 HOH HOH . F 4 HOH A 198 543 202 HOH HOH . F 4 HOH A 199 544 203 HOH HOH . F 4 HOH A 200 545 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 52.686 3.904 -2.974 1 59 ? C1 EDO 345 A 1 HETATM 2 O O1 EDO . . . E 3 51.36 4.246 -2.557 1 53.37 ? O1 EDO 345 A 1 HETATM 3 C C2 EDO . . . E 3 52.662 2.562 -3.693 1 62.74 ? C2 EDO 345 A 1 HETATM 4 O O2 EDO . . . E 3 51.863 2.671 -4.884 1 67.43 ? O2 EDO 345 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #