data_3F06 # _model_server_result.job_id ovv2KdV6av7MVhw3YlwxAA _model_server_result.datetime_utc '2024-11-27 12:14:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":403}' # _entry.id 3F06 # _exptl.entry_id 3F06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.68 _cell.angle_gamma 90 _cell.entry_id 3F06 _cell.length_a 55.989 _cell.length_b 85.875 _cell.length_c 94.834 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 176 A ASP 176 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc2 A OD1 ASP 176 A ASP 176 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.031 ? metalc ? metalc3 A OD2 ASP 178 A ASP 178 1_555 C ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc4 A O ASP 178 A ASP 178 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc5 A ND1 HIS 180 A HIS 180 1_555 C ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc6 A O HIS 180 A HIS 180 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.849 ? metalc ? metalc7 A O PHE 189 A PHE 189 1_555 E K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc8 A O THR 192 A THR 192 1_555 E K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc9 A O VAL 195 A VAL 195 1_555 E K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc10 A OG SER 199 A SER 199 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc11 A O LEU 200 A LEU 200 1_555 D K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc12 A O TYR 225 A TYR 225 1_555 E K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc13 A OD2 ASP 267 A ASP 267 1_555 C ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc14 C ZN ZN . A ZN 404 1_555 F O2 B3N . A B3N 500 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.949 ? metalc ? metalc15 C ZN ZN . A ZN 404 1_555 F O2 B3N . A B3N 500 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.955 ? metalc ? metalc16 C ZN ZN . A ZN 404 1_555 F O4 B3N . A B3N 500 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.125 ? metalc ? metalc17 C ZN ZN . A ZN 404 1_555 F O4 B3N . A B3N 500 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.144 ? metalc ? metalc18 B O ASP 176 B ASP 176 1_555 I K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc19 B OD1 ASP 176 B ASP 176 1_555 I K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? metalc ? metalc20 B OD2 ASP 178 B ASP 178 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? metalc ? metalc21 B O ASP 178 B ASP 178 1_555 I K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc22 B ND1 HIS 180 B HIS 180 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc23 B O HIS 180 B HIS 180 1_555 I K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc24 B O PHE 189 B PHE 189 1_555 J K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc25 B O THR 192 B THR 192 1_555 J K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? metalc ? metalc26 B O VAL 195 B VAL 195 1_555 J K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc27 B OG SER 199 B SER 199 1_555 I K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.004 ? metalc ? metalc28 B O LEU 200 B LEU 200 1_555 I K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc29 B O TYR 225 B TYR 225 1_555 J K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc30 B OD2 ASP 267 B ASP 267 1_555 H ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc31 N O HOH . B HOH 395 1_555 J K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc32 H ZN ZN . B ZN 401 1_555 K O2 B3N . B B3N 501 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.105 ? metalc ? metalc33 H ZN ZN . B ZN 401 1_555 K O2 B3N . B B3N 501 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.993 ? metalc ? metalc34 H ZN ZN . B ZN 401 1_555 K O4 B3N . B B3N 501 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.941 ? metalc ? metalc35 H ZN ZN . B ZN 401 1_555 K O4 B3N . B B3N 501 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.017 ? metalc ? metalc36 H ZN ZN . B ZN 401 1_555 K N3 B3N . B B3N 501 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.631 ? metalc ? metalc37 H ZN ZN . B ZN 401 1_555 K N3 B3N . B B3N 501 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.632 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3F06 _atom_sites.fract_transf_matrix[1][1] 0.017861 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001149 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 404 404 ZN ZN . D 3 K A 1 405 405 K K . E 3 K A 1 406 406 K K . F 4 B3N A 1 500 500 B3N B3N . G 5 BME A 1 601 601 BME BME . H 2 ZN B 1 401 401 ZN ZN . I 3 K B 1 402 402 K K . J 3 K B 1 403 403 K K . K 4 B3N B 1 501 501 B3N B3N . L 5 BME B 1 600 600 BME BME . M 6 HOH A 1 389 1 HOH HOH . M 6 HOH A 2 390 3 HOH HOH . M 6 HOH A 3 391 6 HOH HOH . M 6 HOH A 4 392 9 HOH HOH . M 6 HOH A 5 393 11 HOH HOH . M 6 HOH A 6 394 12 HOH HOH . M 6 HOH A 7 395 13 HOH HOH . M 6 HOH A 8 396 17 HOH HOH . M 6 HOH A 9 397 20 HOH HOH . M 6 HOH A 10 398 22 HOH HOH . M 6 HOH A 11 399 23 HOH HOH . M 6 HOH A 12 400 24 HOH HOH . M 6 HOH A 13 401 26 HOH HOH . M 6 HOH A 14 402 28 HOH HOH . M 6 HOH A 15 403 30 HOH HOH . M 6 HOH A 16 407 21 HOH HOH . N 6 HOH B 1 389 2 HOH HOH . N 6 HOH B 2 390 4 HOH HOH . N 6 HOH B 3 391 5 HOH HOH . N 6 HOH B 4 392 7 HOH HOH . N 6 HOH B 5 393 8 HOH HOH . N 6 HOH B 6 394 10 HOH HOH . N 6 HOH B 7 395 14 HOH HOH . N 6 HOH B 8 396 15 HOH HOH . N 6 HOH B 9 397 16 HOH HOH . N 6 HOH B 10 398 18 HOH HOH . N 6 HOH B 11 399 19 HOH HOH . N 6 HOH B 12 404 25 HOH HOH . N 6 HOH B 13 405 27 HOH HOH . N 6 HOH B 14 406 29 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.275 _atom_site.Cartn_y 9.296 _atom_site.Cartn_z 0.622 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 403 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #