data_3F07
#
_model_server_result.job_id            sUyu-uEmfnth740E5cjZNg 
_model_server_result.datetime_utc      '2024-11-28 17:24:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3f07 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":400}' 
#
_entry.id    3F07 
#
_exptl.entry_id    3F07 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.74 
_cell.angle_gamma         90 
_cell.entry_id            3F07 
_cell.length_a            88.381 
_cell.length_b            90.171 
_cell.length_c            92.267 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3F07 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,P 1 1 
B,I,J,K,L,Q 2 1 
C,M,N,O,R 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 G N N 
? 2 I N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 78 A HIS 78 1_555 G ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc2 A ND1 HIS 90 A HIS 90 1_555 G ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc3 A O ASP 176 A ASP 176 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc4 A OD2 ASP 178 A ASP 178 1_555 D ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc5 A O ASP 178 A ASP 178 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? 
metalc ? metalc6 A ND1 HIS 180 A HIS 180 1_555 D ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc7 A O HIS 180 A HIS 180 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? 
metalc ? metalc8 A O VAL 195 A VAL 195 1_555 F K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? 
metalc ? metalc9 A O LEU 200 A LEU 200 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? 
metalc ? metalc10 A O TYR 225 A TYR 225 1_555 F K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? 
metalc ? metalc11 A OD2 ASP 267 A ASP 267 1_555 D ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc12 B O ASP 176 B ASP 176 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
metalc ? metalc13 B OD2 ASP 178 B ASP 178 1_555 I ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc14 B O ASP 178 B ASP 178 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? 
metalc ? metalc15 B ND1 HIS 180 B HIS 180 1_555 I ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc16 B O HIS 180 B HIS 180 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? 
metalc ? metalc17 B O VAL 195 B VAL 195 1_555 K K K . B K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc18 B O LEU 200 B LEU 200 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
metalc ? metalc19 B O TYR 225 B TYR 225 1_555 K K K . B K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? 
metalc ? metalc20 B OD2 ASP 267 B ASP 267 1_555 I ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc21 C O ASP 176 C ASP 176 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? 
metalc ? metalc22 C OD2 ASP 178 C ASP 178 1_555 M ZN ZN . C ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc23 C O ASP 178 C ASP 178 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? 
metalc ? metalc24 C ND1 HIS 180 C HIS 180 1_555 M ZN ZN . C ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc25 C O HIS 180 C HIS 180 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc26 C O PHE 189 C PHE 189 1_555 O K K . C K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc27 C O VAL 195 C VAL 195 1_555 O K K . C K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? 
metalc ? metalc28 C O LEU 200 C LEU 200 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? 
metalc ? metalc29 C O TYR 225 C TYR 225 1_555 O K K . C K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? 
metalc ? metalc30 C OD2 ASP 267 C ASP 267 1_555 M ZN ZN . C ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc31 M ZN ZN . C ZN 406 1_555 R O HOH . C HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3F07 
_atom_sites.fract_transf_matrix[1][1]    0.011315 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000939 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01109 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010875 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ZN A 1 400 400 ZN ZN . 
E 3 K A 1 401 401 K K . 
F 3 K A 1 402 402 K K . 
G 2 ZN A 1 409 409 ZN ZN . 
H 4 AGE A 1 500 500 AGE AGE . 
I 2 ZN B 1 403 403 ZN ZN . 
J 3 K B 1 404 404 K K . 
K 3 K B 1 405 405 K K . 
L 4 AGE B 1 501 501 AGE AGE . 
M 2 ZN C 1 406 406 ZN ZN . 
N 3 K C 1 407 407 K K . 
O 3 K C 1 408 408 K K . 
P 5 HOH A 1 800 800 HOH HOH . 
P 5 HOH A 2 801 801 HOH HOH . 
P 5 HOH A 3 802 802 HOH HOH . 
P 5 HOH A 4 803 803 HOH HOH . 
P 5 HOH A 5 812 812 HOH HOH . 
Q 5 HOH B 1 804 804 HOH HOH . 
Q 5 HOH B 2 805 805 HOH HOH . 
Q 5 HOH B 3 807 807 HOH HOH . 
R 5 HOH C 1 808 808 HOH HOH . 
R 5 HOH C 2 809 809 HOH HOH . 
R 5 HOH C 3 810 810 HOH HOH . 
R 5 HOH C 4 811 811 HOH HOH . 
R 5 HOH C 5 813 813 HOH HOH . 
R 5 HOH C 6 814 814 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -30.594 
_atom_site.Cartn_y               25.035 
_atom_site.Cartn_z               -40.928 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        37.92 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           400 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#