data_3F07 # _model_server_result.job_id F7XNuNrKoYbpswZzcX1uzA _model_server_result.datetime_utc '2024-11-25 00:21:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":404}' # _entry.id 3F07 # _exptl.entry_id 3F07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.74 _cell.angle_gamma 90 _cell.entry_id 3F07 _cell.length_a 88.381 _cell.length_b 90.171 _cell.length_c 92.267 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,P 1 1 B,I,J,K,L,Q 2 1 C,M,N,O,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 J N N ? 3 K N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 78 A HIS 78 1_555 G ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc2 A ND1 HIS 90 A HIS 90 1_555 G ZN ZN . A ZN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc3 A O ASP 176 A ASP 176 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc4 A OD2 ASP 178 A ASP 178 1_555 D ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc5 A O ASP 178 A ASP 178 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? metalc ? metalc6 A ND1 HIS 180 A HIS 180 1_555 D ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc7 A O HIS 180 A HIS 180 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc8 A O VAL 195 A VAL 195 1_555 F K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc9 A O LEU 200 A LEU 200 1_555 E K K . A K 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc10 A O TYR 225 A TYR 225 1_555 F K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc11 A OD2 ASP 267 A ASP 267 1_555 D ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc12 B O ASP 176 B ASP 176 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc13 B OD2 ASP 178 B ASP 178 1_555 I ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc14 B O ASP 178 B ASP 178 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc15 B ND1 HIS 180 B HIS 180 1_555 I ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc16 B O HIS 180 B HIS 180 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc17 B O VAL 195 B VAL 195 1_555 K K K . B K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? metalc ? metalc18 B O LEU 200 B LEU 200 1_555 J K K . B K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc19 B O TYR 225 B TYR 225 1_555 K K K . B K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc20 B OD2 ASP 267 B ASP 267 1_555 I ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc21 C O ASP 176 C ASP 176 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc22 C OD2 ASP 178 C ASP 178 1_555 M ZN ZN . C ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc23 C O ASP 178 C ASP 178 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc24 C ND1 HIS 180 C HIS 180 1_555 M ZN ZN . C ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc25 C O HIS 180 C HIS 180 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc26 C O PHE 189 C PHE 189 1_555 O K K . C K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc27 C O VAL 195 C VAL 195 1_555 O K K . C K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc28 C O LEU 200 C LEU 200 1_555 N K K . C K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc29 C O TYR 225 C TYR 225 1_555 O K K . C K 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc30 C OD2 ASP 267 C ASP 267 1_555 M ZN ZN . C ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc31 M ZN ZN . C ZN 406 1_555 R O HOH . C HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3F07 _atom_sites.fract_transf_matrix[1][1] 0.011315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000939 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010875 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 400 400 ZN ZN . E 3 K A 1 401 401 K K . F 3 K A 1 402 402 K K . G 2 ZN A 1 409 409 ZN ZN . H 4 AGE A 1 500 500 AGE AGE . I 2 ZN B 1 403 403 ZN ZN . J 3 K B 1 404 404 K K . K 3 K B 1 405 405 K K . L 4 AGE B 1 501 501 AGE AGE . M 2 ZN C 1 406 406 ZN ZN . N 3 K C 1 407 407 K K . O 3 K C 1 408 408 K K . P 5 HOH A 1 800 800 HOH HOH . P 5 HOH A 2 801 801 HOH HOH . P 5 HOH A 3 802 802 HOH HOH . P 5 HOH A 4 803 803 HOH HOH . P 5 HOH A 5 812 812 HOH HOH . Q 5 HOH B 1 804 804 HOH HOH . Q 5 HOH B 2 805 805 HOH HOH . Q 5 HOH B 3 807 807 HOH HOH . R 5 HOH C 1 808 808 HOH HOH . R 5 HOH C 2 809 809 HOH HOH . R 5 HOH C 3 810 810 HOH HOH . R 5 HOH C 4 811 811 HOH HOH . R 5 HOH C 5 813 813 HOH HOH . R 5 HOH C 6 814 814 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -2.524 _atom_site.Cartn_y 0.001 _atom_site.Cartn_z 33.141 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #