data_3F0A
#
_model_server_result.job_id            z8ojoLvGQboGPKWo7wB5XA 
_model_server_result.datetime_utc      '2024-12-27 03:08:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3f0a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":160}' 
#
_entry.id    3F0A 
#
_exptl.entry_id    3F0A 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3F0A 
_cell.length_a            69.038 
_cell.length_b            69.038 
_cell.length_c            89.193 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3F0A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -44.5965 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 4 A MSE 1 1_555 A N SER 5 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C ILE 117 A ILE 114 1_555 A N MSE 118 A MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 A C MSE 118 A MSE 115 1_555 A N LYS 119 A LYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C ILE 157 A ILE 154 1_555 A N MSE 158 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 A C MSE 158 A MSE 155 1_555 A N GLU 159 A GLU 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
metalc ? metalc1 A NE2 HIS 103 A HIS 100 1_555 B NI NI . A NI 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc2 B NI NI . A NI 160 1_555 D O8A ACO . A ACO 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3F0A 
_atom_sites.fract_transf_matrix[1][1]    0.014485 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014485 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011212 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 160 1 NI NI . 
C 3 CL A 1 161 2 CL CL . 
D 4 ACO A 1 162 3 ACO ACO . 
E 5 HOH A 1 163 4 HOH HOH . 
E 5 HOH A 2 164 5 HOH HOH . 
E 5 HOH A 3 165 6 HOH HOH . 
E 5 HOH A 4 166 7 HOH HOH . 
E 5 HOH A 5 167 8 HOH HOH . 
E 5 HOH A 6 168 9 HOH HOH . 
E 5 HOH A 7 169 10 HOH HOH . 
E 5 HOH A 8 170 11 HOH HOH . 
E 5 HOH A 9 171 12 HOH HOH . 
E 5 HOH A 10 172 13 HOH HOH . 
E 5 HOH A 11 173 14 HOH HOH . 
E 5 HOH A 12 174 15 HOH HOH . 
E 5 HOH A 13 175 16 HOH HOH . 
E 5 HOH A 14 176 17 HOH HOH . 
E 5 HOH A 15 177 18 HOH HOH . 
E 5 HOH A 16 178 19 HOH HOH . 
E 5 HOH A 17 179 20 HOH HOH . 
E 5 HOH A 18 180 21 HOH HOH . 
E 5 HOH A 19 181 22 HOH HOH . 
E 5 HOH A 20 182 23 HOH HOH . 
E 5 HOH A 21 183 24 HOH HOH . 
E 5 HOH A 22 184 25 HOH HOH . 
E 5 HOH A 23 185 26 HOH HOH . 
E 5 HOH A 24 186 27 HOH HOH . 
E 5 HOH A 25 187 28 HOH HOH . 
E 5 HOH A 26 188 29 HOH HOH . 
E 5 HOH A 27 189 30 HOH HOH . 
E 5 HOH A 28 190 31 HOH HOH . 
E 5 HOH A 29 191 32 HOH HOH . 
E 5 HOH A 30 192 33 HOH HOH . 
E 5 HOH A 31 193 34 HOH HOH . 
E 5 HOH A 32 194 35 HOH HOH . 
E 5 HOH A 33 195 36 HOH HOH . 
E 5 HOH A 34 196 37 HOH HOH . 
E 5 HOH A 35 197 38 HOH HOH . 
E 5 HOH A 36 198 39 HOH HOH . 
E 5 HOH A 37 199 40 HOH HOH . 
E 5 HOH A 38 200 41 HOH HOH . 
E 5 HOH A 39 201 42 HOH HOH . 
E 5 HOH A 40 202 43 HOH HOH . 
E 5 HOH A 41 203 44 HOH HOH . 
E 5 HOH A 42 204 45 HOH HOH . 
E 5 HOH A 43 205 46 HOH HOH . 
E 5 HOH A 44 206 47 HOH HOH . 
E 5 HOH A 45 207 48 HOH HOH . 
E 5 HOH A 46 208 49 HOH HOH . 
E 5 HOH A 47 209 50 HOH HOH . 
E 5 HOH A 48 210 51 HOH HOH . 
E 5 HOH A 49 211 52 HOH HOH . 
E 5 HOH A 50 212 53 HOH HOH . 
E 5 HOH A 51 213 54 HOH HOH . 
E 5 HOH A 52 214 55 HOH HOH . 
E 5 HOH A 53 215 56 HOH HOH . 
E 5 HOH A 54 216 57 HOH HOH . 
E 5 HOH A 55 217 58 HOH HOH . 
E 5 HOH A 56 218 59 HOH HOH . 
E 5 HOH A 57 219 60 HOH HOH . 
E 5 HOH A 58 220 61 HOH HOH . 
E 5 HOH A 59 221 62 HOH HOH . 
E 5 HOH A 60 222 63 HOH HOH . 
E 5 HOH A 61 223 64 HOH HOH . 
E 5 HOH A 62 224 65 HOH HOH . 
E 5 HOH A 63 225 66 HOH HOH . 
E 5 HOH A 64 226 67 HOH HOH . 
E 5 HOH A 65 227 68 HOH HOH . 
E 5 HOH A 66 228 69 HOH HOH . 
E 5 HOH A 67 229 70 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               11.953 
_atom_site.Cartn_y               -11.96 
_atom_site.Cartn_z               -22.292 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        23.61 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           160 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
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_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
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