data_3F0A # _model_server_result.job_id 4wZNHfS7a4JD-wxoPrcZWw _model_server_result.datetime_utc '2024-12-27 03:13:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f0a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":162}' # _entry.id 3F0A # _exptl.entry_id 3F0A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3F0A _cell.length_a 69.038 _cell.length_b 69.038 _cell.length_c 89.193 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F0A _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -44.5965 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 4 A MSE 1 1_555 A N SER 5 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C ILE 117 A ILE 114 1_555 A N MSE 118 A MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C MSE 118 A MSE 115 1_555 A N LYS 119 A LYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C ILE 157 A ILE 154 1_555 A N MSE 158 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C MSE 158 A MSE 155 1_555 A N GLU 159 A GLU 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 A NE2 HIS 103 A HIS 100 1_555 B NI NI . A NI 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc2 B NI NI . A NI 160 1_555 D O8A ACO . A ACO 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 3F0A _atom_sites.fract_transf_matrix[1][1] 0.014485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 160 1 NI NI . C 3 CL A 1 161 2 CL CL . D 4 ACO A 1 162 3 ACO ACO . E 5 HOH A 1 163 4 HOH HOH . E 5 HOH A 2 164 5 HOH HOH . E 5 HOH A 3 165 6 HOH HOH . E 5 HOH A 4 166 7 HOH HOH . E 5 HOH A 5 167 8 HOH HOH . E 5 HOH A 6 168 9 HOH HOH . E 5 HOH A 7 169 10 HOH HOH . E 5 HOH A 8 170 11 HOH HOH . E 5 HOH A 9 171 12 HOH HOH . E 5 HOH A 10 172 13 HOH HOH . E 5 HOH A 11 173 14 HOH HOH . E 5 HOH A 12 174 15 HOH HOH . E 5 HOH A 13 175 16 HOH HOH . E 5 HOH A 14 176 17 HOH HOH . E 5 HOH A 15 177 18 HOH HOH . E 5 HOH A 16 178 19 HOH HOH . E 5 HOH A 17 179 20 HOH HOH . E 5 HOH A 18 180 21 HOH HOH . E 5 HOH A 19 181 22 HOH HOH . E 5 HOH A 20 182 23 HOH HOH . E 5 HOH A 21 183 24 HOH HOH . E 5 HOH A 22 184 25 HOH HOH . E 5 HOH A 23 185 26 HOH HOH . E 5 HOH A 24 186 27 HOH HOH . E 5 HOH A 25 187 28 HOH HOH . E 5 HOH A 26 188 29 HOH HOH . E 5 HOH A 27 189 30 HOH HOH . E 5 HOH A 28 190 31 HOH HOH . E 5 HOH A 29 191 32 HOH HOH . E 5 HOH A 30 192 33 HOH HOH . E 5 HOH A 31 193 34 HOH HOH . E 5 HOH A 32 194 35 HOH HOH . E 5 HOH A 33 195 36 HOH HOH . E 5 HOH A 34 196 37 HOH HOH . E 5 HOH A 35 197 38 HOH HOH . E 5 HOH A 36 198 39 HOH HOH . E 5 HOH A 37 199 40 HOH HOH . E 5 HOH A 38 200 41 HOH HOH . E 5 HOH A 39 201 42 HOH HOH . E 5 HOH A 40 202 43 HOH HOH . E 5 HOH A 41 203 44 HOH HOH . E 5 HOH A 42 204 45 HOH HOH . E 5 HOH A 43 205 46 HOH HOH . E 5 HOH A 44 206 47 HOH HOH . E 5 HOH A 45 207 48 HOH HOH . E 5 HOH A 46 208 49 HOH HOH . E 5 HOH A 47 209 50 HOH HOH . E 5 HOH A 48 210 51 HOH HOH . E 5 HOH A 49 211 52 HOH HOH . E 5 HOH A 50 212 53 HOH HOH . E 5 HOH A 51 213 54 HOH HOH . E 5 HOH A 52 214 55 HOH HOH . E 5 HOH A 53 215 56 HOH HOH . E 5 HOH A 54 216 57 HOH HOH . E 5 HOH A 55 217 58 HOH HOH . E 5 HOH A 56 218 59 HOH HOH . E 5 HOH A 57 219 60 HOH HOH . E 5 HOH A 58 220 61 HOH HOH . E 5 HOH A 59 221 62 HOH HOH . E 5 HOH A 60 222 63 HOH HOH . E 5 HOH A 61 223 64 HOH HOH . E 5 HOH A 62 224 65 HOH HOH . E 5 HOH A 63 225 66 HOH HOH . E 5 HOH A 64 226 67 HOH HOH . E 5 HOH A 65 227 68 HOH HOH . E 5 HOH A 66 228 69 HOH HOH . E 5 HOH A 67 229 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . D 4 9.164 -8.119 -18.999 1 26.53 ? N1A ACO 162 A 1 HETATM 2 C C2A ACO . . . D 4 10.163 -8.789 -18.386 1 24.56 ? C2A ACO 162 A 1 HETATM 3 N N3A ACO . . . D 4 11.485 -8.535 -18.622 1 25.9 ? N3A ACO 162 A 1 HETATM 4 C C4A ACO . . . D 4 11.877 -7.575 -19.499 1 25.34 ? C4A ACO 162 A 1 HETATM 5 C C5A ACO . . . D 4 10.841 -6.807 -20.2 1 23.17 ? C5A ACO 162 A 1 HETATM 6 C C6A ACO . . . D 4 9.426 -7.124 -19.906 1 25.71 ? C6A ACO 162 A 1 HETATM 7 N N6A ACO . . . D 4 8.439 -6.423 -20.54 1 25.38 ? N6A ACO 162 A 1 HETATM 8 N N7A ACO . . . D 4 11.477 -5.93 -21.003 1 26.15 ? N7A ACO 162 A 1 HETATM 9 C C8A ACO . . . D 4 12.81 -6.109 -20.833 1 26.66 ? C8A ACO 162 A 1 HETATM 10 N N9A ACO . . . D 4 13.054 -7.096 -19.94 1 27.15 ? N9A ACO 162 A 1 HETATM 11 C C1B ACO . . . D 4 14.4 -7.542 -19.514 1 28.86 ? C1B ACO 162 A 1 HETATM 12 C C2B ACO . . . D 4 14.486 -9.041 -19.645 1 30.55 ? C2B ACO 162 A 1 HETATM 13 O O2B ACO . . . D 4 15.523 -9.492 -18.777 1 31.05 ? O2B ACO 162 A 1 HETATM 14 C C3B ACO . . . D 4 14.919 -9.185 -21.077 1 29.63 ? C3B ACO 162 A 1 HETATM 15 O O3B ACO . . . D 4 15.636 -10.391 -21.23 1 29.04 ? O3B ACO 162 A 1 HETATM 16 P P3B ACO . . . D 4 14.967 -11.736 -21.868 1 29.46 ? P3B ACO 162 A 1 HETATM 17 O O7A ACO . . . D 4 14.978 -11.493 -23.373 1 26.18 ? O7A ACO 162 A 1 HETATM 18 O O8A ACO . . . D 4 13.586 -11.889 -21.235 1 24.5 ? O8A ACO 162 A 1 HETATM 19 O O9A ACO . . . D 4 15.957 -12.795 -21.391 1 27.61 ? O9A ACO 162 A 1 HETATM 20 C C4B ACO . . . D 4 15.799 -7.983 -21.353 1 29.27 ? C4B ACO 162 A 1 HETATM 21 O O4B ACO . . . D 4 15.375 -6.996 -20.409 1 32.7 ? O4B ACO 162 A 1 HETATM 22 C C5B ACO . . . D 4 15.555 -7.454 -22.74 1 27.35 ? C5B ACO 162 A 1 HETATM 23 O O5B ACO . . . D 4 16.489 -6.421 -22.98 1 26.22 ? O5B ACO 162 A 1 HETATM 24 P P1A ACO . . . D 4 16.055 -5.099 -23.771 1 28.64 ? P1A ACO 162 A 1 HETATM 25 O O1A ACO . . . D 4 15.059 -5.469 -24.867 1 25.71 ? O1A ACO 162 A 1 HETATM 26 O O2A ACO . . . D 4 17.372 -4.424 -24.054 1 25.85 ? O2A ACO 162 A 1 HETATM 27 O O3A ACO . . . D 4 15.26 -4.345 -22.608 1 25.92 ? O3A ACO 162 A 1 HETATM 28 P P2A ACO . . . D 4 14.381 -2.984 -22.728 1 29.46 ? P2A ACO 162 A 1 HETATM 29 O O4A ACO . . . D 4 12.979 -3.359 -22.244 1 26.3 ? O4A ACO 162 A 1 HETATM 30 O O5A ACO . . . D 4 14.657 -2.322 -24.06 1 29.55 ? O5A ACO 162 A 1 HETATM 31 O O6A ACO . . . D 4 14.975 -2.014 -21.562 1 27.23 ? O6A ACO 162 A 1 HETATM 32 C CBP ACO . . . D 4 14.423 -1.538 -19.234 1 26.73 ? CBP ACO 162 A 1 HETATM 33 C CCP ACO . . . D 4 15.138 -2.456 -20.209 1 26.44 ? CCP ACO 162 A 1 HETATM 34 C CDP ACO . . . D 4 14.709 -1.996 -17.799 1 23.86 ? CDP ACO 162 A 1 HETATM 35 C CEP ACO . . . D 4 14.897 -0.106 -19.485 1 24.15 ? CEP ACO 162 A 1 HETATM 36 C CAP ACO . . . D 4 12.928 -1.661 -19.541 1 27.95 ? CAP ACO 162 A 1 HETATM 37 O OAP ACO . . . D 4 12.587 -3.049 -19.476 1 29.21 ? OAP ACO 162 A 1 HETATM 38 C C9P ACO . . . D 4 12.056 -0.841 -18.613 1 30.8 ? C9P ACO 162 A 1 HETATM 39 O O9P ACO . . . D 4 11.876 0.351 -18.834 1 32.39 ? O9P ACO 162 A 1 HETATM 40 N N8P ACO . . . D 4 11.495 -1.463 -17.564 1 33.86 ? N8P ACO 162 A 1 HETATM 41 C C7P ACO . . . D 4 10.75 -0.781 -16.507 1 31.09 ? C7P ACO 162 A 1 HETATM 42 C C6P ACO . . . D 4 11.483 0.384 -15.842 1 32.94 ? C6P ACO 162 A 1 HETATM 43 C C5P ACO . . . D 4 12.712 -0.117 -15.094 1 34.44 ? C5P ACO 162 A 1 HETATM 44 O O5P ACO . . . D 4 12.612 -1.13 -14.395 1 38.44 ? O5P ACO 162 A 1 HETATM 45 N N4P ACO . . . D 4 13.85 0.582 -15.243 1 29.91 ? N4P ACO 162 A 1 HETATM 46 C C3P ACO . . . D 4 15.002 0.494 -14.375 1 31.03 ? C3P ACO 162 A 1 HETATM 47 C C2P ACO . . . D 4 14.777 1.292 -13.075 1 36.65 ? C2P ACO 162 A 1 HETATM 48 S S1P ACO . . . D 4 16.259 1.311 -12.099 1 38.3 ? S1P ACO 162 A 1 HETATM 49 C C ACO . . . D 4 17.176 2.617 -12.633 1 38.65 ? C ACO 162 A 1 HETATM 50 O O ACO . . . D 4 16.669 3.401 -13.431 1 39.22 ? O ACO 162 A 1 HETATM 51 C CH3 ACO . . . D 4 18.579 2.806 -12.142 1 36.97 ? CH3 ACO 162 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 51 #