data_3F0B # _model_server_result.job_id ZOOp7C9derUSv-PdBzBsRg _model_server_result.datetime_utc '2024-11-05 06:49:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f0b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":207}' # _entry.id 3F0B # _exptl.entry_id 3F0B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3F0B _cell.length_a 79.12 _cell.length_b 79.12 _cell.length_c 109.145 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F0B _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 275 n n PA O2A NDP sing 276 n n PA O5B NDP sing 277 n n PA O3 NDP sing 278 n n O2A HOA2 NDP sing 279 n n O5B C5B NDP sing 280 n n C5B C4B NDP sing 281 n n C5B H51A NDP sing 282 n n C5B H52A NDP sing 283 n n C4B O4B NDP sing 284 n n C4B C3B NDP sing 285 n n C4B H4B NDP sing 286 n n O4B C1B NDP sing 287 n n C3B O3B NDP sing 288 n n C3B C2B NDP sing 289 n n C3B H3B NDP sing 290 n n O3B HO3A NDP sing 291 n n C2B O2B NDP sing 292 n n C2B C1B NDP sing 293 n n C2B H2B NDP sing 294 n n O2B P2B NDP sing 295 n n C1B N9A NDP sing 296 n n C1B H1B NDP sing 297 n n N9A C8A NDP sing 298 n y N9A C4A NDP sing 299 n y C8A N7A NDP doub 300 n y C8A H8A NDP sing 301 n n N7A C5A NDP sing 302 n y C5A C6A NDP sing 303 n y C5A C4A NDP doub 304 n y C6A N6A NDP sing 305 n n C6A N1A NDP doub 306 n y N6A H61A NDP sing 307 n n N6A H62A NDP sing 308 n n N1A C2A NDP sing 309 n y C2A N3A NDP doub 310 n y C2A H2A NDP sing 311 n n N3A C4A NDP sing 312 n y O3 PN NDP sing 313 n n PN O1N NDP doub 314 n n PN O2N NDP sing 315 n n PN O5D NDP sing 316 n n O2N H21N NDP sing 317 n n O5D C5D NDP sing 318 n n C5D C4D NDP sing 319 n n C5D H51N NDP sing 320 n n C5D H52N NDP sing 321 n n C4D O4D NDP sing 322 n n C4D C3D NDP sing 323 n n C4D H4D NDP sing 324 n n O4D C1D NDP sing 325 n n C3D O3D NDP sing 326 n n C3D C2D NDP sing 327 n n C3D H3D NDP sing 328 n n O3D HO3N NDP sing 329 n n C2D O2D NDP sing 330 n n C2D C1D NDP sing 331 n n C2D H2D NDP sing 332 n n O2D HO2N NDP sing 333 n n C1D N1N NDP sing 334 n n C1D H1D NDP sing 335 n n N1N C2N NDP sing 336 n n N1N C6N NDP sing 337 n n C2N C3N NDP doub 338 n n C2N H2N NDP sing 339 n n C3N C7N NDP sing 340 n n C3N C4N NDP sing 341 n n C7N O7N NDP doub 342 n n C7N N7N NDP sing 343 n n N7N H71N NDP sing 344 n n N7N H72N NDP sing 345 n n C4N C5N NDP sing 346 n n C4N H41N NDP sing 347 n n C4N H42N NDP sing 348 n n C5N C6N NDP doub 349 n n C5N H5N NDP sing 350 n n C6N H6N NDP sing 351 n n P2B O1X NDP doub 352 n n P2B O2X NDP sing 353 n n P2B O3X NDP sing 354 n n O2X HOP2 NDP sing 355 n n O3X HOP3 NDP sing 356 n n # _atom_sites.entry_id 3F0B _atom_sites.fract_transf_matrix[1][1] 0.012639 _atom_sites.fract_transf_matrix[1][2] 0.007297 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009162 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP X 1 207 207 NDP NAP . C 3 53R X 1 158 158 53R 53R . D 4 HOH X 1 159 159 HOH HOH . D 4 HOH X 2 160 160 HOH HOH . D 4 HOH X 3 161 161 HOH HOH . D 4 HOH X 4 162 162 HOH HOH . D 4 HOH X 5 163 163 HOH HOH . D 4 HOH X 6 164 164 HOH HOH . D 4 HOH X 7 165 165 HOH HOH . D 4 HOH X 8 166 166 HOH HOH . D 4 HOH X 9 167 167 HOH HOH . D 4 HOH X 10 168 168 HOH HOH . D 4 HOH X 11 169 169 HOH HOH . D 4 HOH X 12 170 170 HOH HOH . D 4 HOH X 13 171 171 HOH HOH . D 4 HOH X 14 172 172 HOH HOH . D 4 HOH X 15 173 173 HOH HOH . D 4 HOH X 16 174 174 HOH HOH . D 4 HOH X 17 175 175 HOH HOH . D 4 HOH X 18 176 176 HOH HOH . D 4 HOH X 19 177 177 HOH HOH . D 4 HOH X 20 178 178 HOH HOH . D 4 HOH X 21 179 179 HOH HOH . D 4 HOH X 22 180 180 HOH HOH . D 4 HOH X 23 181 181 HOH HOH . D 4 HOH X 24 182 182 HOH HOH . D 4 HOH X 25 183 183 HOH HOH . D 4 HOH X 26 184 184 HOH HOH . D 4 HOH X 27 185 185 HOH HOH . D 4 HOH X 28 186 186 HOH HOH . D 4 HOH X 29 187 187 HOH HOH . D 4 HOH X 30 188 188 HOH HOH . D 4 HOH X 31 189 189 HOH HOH . D 4 HOH X 32 190 190 HOH HOH . D 4 HOH X 33 192 192 HOH HOH . D 4 HOH X 34 193 193 HOH HOH . D 4 HOH X 35 194 194 HOH HOH . D 4 HOH X 36 195 195 HOH HOH . D 4 HOH X 37 196 196 HOH HOH . D 4 HOH X 38 197 197 HOH HOH . D 4 HOH X 39 198 198 HOH HOH . D 4 HOH X 40 199 199 HOH HOH . D 4 HOH X 41 200 200 HOH HOH . D 4 HOH X 42 201 201 HOH HOH . D 4 HOH X 43 202 202 HOH HOH . D 4 HOH X 44 203 203 HOH HOH . D 4 HOH X 45 204 204 HOH HOH . D 4 HOH X 46 205 205 HOH HOH . D 4 HOH X 47 206 206 HOH HOH . D 4 HOH X 48 208 208 HOH HOH . D 4 HOH X 49 209 209 HOH HOH . D 4 HOH X 50 210 210 HOH HOH . D 4 HOH X 51 211 211 HOH HOH . D 4 HOH X 52 212 212 HOH HOH . D 4 HOH X 53 213 213 HOH HOH . D 4 HOH X 54 214 214 HOH HOH . D 4 HOH X 55 215 215 HOH HOH . D 4 HOH X 56 216 216 HOH HOH . D 4 HOH X 57 217 217 HOH HOH . D 4 HOH X 58 218 218 HOH HOH . D 4 HOH X 59 219 219 HOH HOH . D 4 HOH X 60 220 220 HOH HOH . D 4 HOH X 61 221 221 HOH HOH . D 4 HOH X 62 222 222 HOH HOH . D 4 HOH X 63 223 223 HOH HOH . D 4 HOH X 64 224 224 HOH HOH . D 4 HOH X 65 225 225 HOH HOH . D 4 HOH X 66 226 226 HOH HOH . D 4 HOH X 67 227 227 HOH HOH . D 4 HOH X 68 229 229 HOH HOH . D 4 HOH X 69 230 230 HOH HOH . D 4 HOH X 70 231 231 HOH HOH . D 4 HOH X 71 232 232 HOH HOH . D 4 HOH X 72 233 233 HOH HOH . D 4 HOH X 73 234 234 HOH HOH . D 4 HOH X 74 235 235 HOH HOH . D 4 HOH X 75 236 236 HOH HOH . D 4 HOH X 76 237 237 HOH HOH . D 4 HOH X 77 238 238 HOH HOH . D 4 HOH X 78 239 239 HOH HOH . D 4 HOH X 79 240 240 HOH HOH . D 4 HOH X 80 241 241 HOH HOH . D 4 HOH X 81 242 242 HOH HOH . D 4 HOH X 82 243 243 HOH HOH . D 4 HOH X 83 244 244 HOH HOH . D 4 HOH X 84 245 245 HOH HOH . D 4 HOH X 85 246 246 HOH HOH . D 4 HOH X 86 248 248 HOH HOH . D 4 HOH X 87 249 249 HOH HOH . D 4 HOH X 88 250 250 HOH HOH . D 4 HOH X 89 251 251 HOH HOH . D 4 HOH X 90 252 252 HOH HOH . D 4 HOH X 91 254 254 HOH HOH . D 4 HOH X 92 255 255 HOH HOH . D 4 HOH X 93 256 256 HOH HOH . D 4 HOH X 94 257 257 HOH HOH . D 4 HOH X 95 258 258 HOH HOH . D 4 HOH X 96 259 259 HOH HOH . D 4 HOH X 97 260 260 HOH HOH . D 4 HOH X 98 261 261 HOH HOH . D 4 HOH X 99 262 262 HOH HOH . D 4 HOH X 100 263 263 HOH HOH . D 4 HOH X 101 264 264 HOH HOH . D 4 HOH X 102 265 265 HOH HOH . D 4 HOH X 103 266 266 HOH HOH . D 4 HOH X 104 267 267 HOH HOH . D 4 HOH X 105 268 268 HOH HOH . D 4 HOH X 106 269 269 HOH HOH . D 4 HOH X 107 270 270 HOH HOH . D 4 HOH X 108 271 271 HOH HOH . D 4 HOH X 109 272 272 HOH HOH . D 4 HOH X 110 273 273 HOH HOH . D 4 HOH X 111 275 275 HOH HOH . D 4 HOH X 112 276 276 HOH HOH . D 4 HOH X 113 277 277 HOH HOH . D 4 HOH X 114 278 278 HOH HOH . D 4 HOH X 115 279 279 HOH HOH . D 4 HOH X 116 280 280 HOH HOH . D 4 HOH X 117 281 281 HOH HOH . D 4 HOH X 118 282 282 HOH HOH . D 4 HOH X 119 283 283 HOH HOH . D 4 HOH X 120 285 285 HOH HOH . D 4 HOH X 121 286 286 HOH HOH . D 4 HOH X 122 287 287 HOH HOH . D 4 HOH X 123 288 288 HOH HOH . D 4 HOH X 124 289 289 HOH HOH . D 4 HOH X 125 291 291 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 -23.687 -21.598 42.939 1 24.38 ? PA NDP 207 X 1 HETATM 2 O O1A NDP . . . B 2 -22.491 -21.169 42.214 1 22.87 ? O1A NDP 207 X 1 HETATM 3 O O2A NDP . . . B 2 -24.878 -20.791 42.611 1 27.99 ? O2A NDP 207 X 1 HETATM 4 O O5B NDP . . . B 2 -23.994 -23.145 42.642 1 25.63 ? O5B NDP 207 X 1 HETATM 5 C C5B NDP . . . B 2 -23.031 -24.164 42.819 1 22.71 ? C5B NDP 207 X 1 HETATM 6 C C4B NDP . . . B 2 -23.576 -25.364 42.068 1 25.51 ? C4B NDP 207 X 1 HETATM 7 O O4B NDP . . . B 2 -23.626 -25.073 40.676 1 25.74 ? O4B NDP 207 X 1 HETATM 8 C C3B NDP . . . B 2 -22.734 -26.63 42.171 1 25.8 ? C3B NDP 207 X 1 HETATM 9 O O3B NDP . . . B 2 -22.948 -27.348 43.37 1 24.94 ? O3B NDP 207 X 1 HETATM 10 C C2B NDP . . . B 2 -23.179 -27.372 40.913 1 25.07 ? C2B NDP 207 X 1 HETATM 11 O O2B NDP . . . B 2 -24.478 -27.883 41.025 1 24.18 ? O2B NDP 207 X 1 HETATM 12 C C1B NDP . . . B 2 -23.352 -26.237 39.921 1 26.05 ? C1B NDP 207 X 1 HETATM 13 N N9A NDP . . . B 2 -22.103 -26.107 39.16 1 27.09 ? N9A NDP 207 X 1 HETATM 14 C C8A NDP . . . B 2 -21.129 -25.14 39.28 1 27.23 ? C8A NDP 207 X 1 HETATM 15 N N7A NDP . . . B 2 -20.156 -25.401 38.38 1 27.81 ? N7A NDP 207 X 1 HETATM 16 C C5A NDP . . . B 2 -20.49 -26.521 37.691 1 28.26 ? C5A NDP 207 X 1 HETATM 17 C C6A NDP . . . B 2 -19.88 -27.235 36.665 1 27.36 ? C6A NDP 207 X 1 HETATM 18 N N6A NDP . . . B 2 -18.708 -26.861 36.156 1 28 ? N6A NDP 207 X 1 HETATM 19 N N1A NDP . . . B 2 -20.504 -28.363 36.162 1 27.51 ? N1A NDP 207 X 1 HETATM 20 C C2A NDP . . . B 2 -21.724 -28.793 36.652 1 27.17 ? C2A NDP 207 X 1 HETATM 21 N N3A NDP . . . B 2 -22.32 -28.083 37.671 1 27.96 ? N3A NDP 207 X 1 HETATM 22 C C4A NDP . . . B 2 -21.715 -26.972 38.179 1 27.7 ? C4A NDP 207 X 1 HETATM 23 O O3 NDP . . . B 2 -23.426 -21.747 44.521 1 26.72 ? O3 NDP 207 X 1 HETATM 24 P PN NDP . . . B 2 -22.491 -21.051 45.614 1 27.93 ? PN NDP 207 X 1 HETATM 25 O O1N NDP . . . B 2 -22.663 -21.693 46.948 1 26.28 ? O1N NDP 207 X 1 HETATM 26 O O2N NDP . . . B 2 -21.161 -20.872 45.054 1 26.58 ? O2N NDP 207 X 1 HETATM 27 O O5D NDP . . . B 2 -23.255 -19.601 45.766 1 31.19 ? O5D NDP 207 X 1 HETATM 28 C C5D NDP . . . B 2 -24.593 -19.397 46.224 1 30.16 ? C5D NDP 207 X 1 HETATM 29 C C4D NDP . . . B 2 -24.745 -18.01 46.881 1 33.01 ? C4D NDP 207 X 1 HETATM 30 O O4D NDP . . . B 2 -24.472 -16.93 45.984 1 33.59 ? O4D NDP 207 X 1 HETATM 31 C C3D NDP . . . B 2 -26.116 -17.678 47.476 1 33.34 ? C3D NDP 207 X 1 HETATM 32 O O3D NDP . . . B 2 -25.86 -17.162 48.765 1 32.04 ? O3D NDP 207 X 1 HETATM 33 C C2D NDP . . . B 2 -26.661 -16.518 46.67 1 31.75 ? C2D NDP 207 X 1 HETATM 34 O O2D NDP . . . B 2 -27.284 -15.634 47.553 1 32.11 ? O2D NDP 207 X 1 HETATM 35 C C1D NDP . . . B 2 -25.396 -15.855 46.185 1 29.88 ? C1D NDP 207 X 1 HETATM 36 N N1N NDP . . . B 2 -25.482 -14.96 45.011 1 29.4 ? N1N NDP 207 X 1 HETATM 37 C C2N NDP . . . B 2 -25.395 -13.612 45.217 1 26.54 ? C2N NDP 207 X 1 HETATM 38 C C3N NDP . . . B 2 -25.435 -12.736 44.143 1 30.48 ? C3N NDP 207 X 1 HETATM 39 C C7N NDP . . . B 2 -25.162 -11.276 44.331 1 29.55 ? C7N NDP 207 X 1 HETATM 40 O O7N NDP . . . B 2 -25.043 -10.546 43.159 1 25.19 ? O7N NDP 207 X 1 HETATM 41 N N7N NDP . . . B 2 -25.046 -10.71 45.546 1 29.86 ? N7N NDP 207 X 1 HETATM 42 C C4N NDP . . . B 2 -25.546 -13.223 42.831 1 29.72 ? C4N NDP 207 X 1 HETATM 43 C C5N NDP . . . B 2 -25.641 -14.597 42.653 1 30.36 ? C5N NDP 207 X 1 HETATM 44 C C6N NDP . . . B 2 -25.586 -15.459 43.742 1 28.36 ? C6N NDP 207 X 1 HETATM 45 P P2B NDP . . . B 2 -24.809 -29.375 41.549 1 24.07 ? P2B NDP 207 X 1 HETATM 46 O O1X NDP . . . B 2 -24.325 -29.501 42.976 1 23.71 ? O1X NDP 207 X 1 HETATM 47 O O2X NDP . . . B 2 -26.306 -29.484 41.454 1 24.04 ? O2X NDP 207 X 1 HETATM 48 O O3X NDP . . . B 2 -24.114 -30.336 40.64 1 24.02 ? O3X NDP 207 X 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 48 #