data_3F0Q # _model_server_result.job_id bNggpGx1xYr6obZJXgK_hg _model_server_result.datetime_utc '2024-11-02 17:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":207}' # _entry.id 3F0Q # _exptl.entry_id 3F0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3F0Q _cell.length_a 79.161 _cell.length_b 79.161 _cell.length_c 108.801 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 281 n n PA O2A NDP sing 282 n n PA O5B NDP sing 283 n n PA O3 NDP sing 284 n n O2A HOA2 NDP sing 285 n n O5B C5B NDP sing 286 n n C5B C4B NDP sing 287 n n C5B H51A NDP sing 288 n n C5B H52A NDP sing 289 n n C4B O4B NDP sing 290 n n C4B C3B NDP sing 291 n n C4B H4B NDP sing 292 n n O4B C1B NDP sing 293 n n C3B O3B NDP sing 294 n n C3B C2B NDP sing 295 n n C3B H3B NDP sing 296 n n O3B HO3A NDP sing 297 n n C2B O2B NDP sing 298 n n C2B C1B NDP sing 299 n n C2B H2B NDP sing 300 n n O2B P2B NDP sing 301 n n C1B N9A NDP sing 302 n n C1B H1B NDP sing 303 n n N9A C8A NDP sing 304 n y N9A C4A NDP sing 305 n y C8A N7A NDP doub 306 n y C8A H8A NDP sing 307 n n N7A C5A NDP sing 308 n y C5A C6A NDP sing 309 n y C5A C4A NDP doub 310 n y C6A N6A NDP sing 311 n n C6A N1A NDP doub 312 n y N6A H61A NDP sing 313 n n N6A H62A NDP sing 314 n n N1A C2A NDP sing 315 n y C2A N3A NDP doub 316 n y C2A H2A NDP sing 317 n n N3A C4A NDP sing 318 n y O3 PN NDP sing 319 n n PN O1N NDP doub 320 n n PN O2N NDP sing 321 n n PN O5D NDP sing 322 n n O2N H21N NDP sing 323 n n O5D C5D NDP sing 324 n n C5D C4D NDP sing 325 n n C5D H51N NDP sing 326 n n C5D H52N NDP sing 327 n n C4D O4D NDP sing 328 n n C4D C3D NDP sing 329 n n C4D H4D NDP sing 330 n n O4D C1D NDP sing 331 n n C3D O3D NDP sing 332 n n C3D C2D NDP sing 333 n n C3D H3D NDP sing 334 n n O3D HO3N NDP sing 335 n n C2D O2D NDP sing 336 n n C2D C1D NDP sing 337 n n C2D H2D NDP sing 338 n n O2D HO2N NDP sing 339 n n C1D N1N NDP sing 340 n n C1D H1D NDP sing 341 n n N1N C2N NDP sing 342 n n N1N C6N NDP sing 343 n n C2N C3N NDP doub 344 n n C2N H2N NDP sing 345 n n C3N C7N NDP sing 346 n n C3N C4N NDP sing 347 n n C7N O7N NDP doub 348 n n C7N N7N NDP sing 349 n n N7N H71N NDP sing 350 n n N7N H72N NDP sing 351 n n C4N C5N NDP sing 352 n n C4N H41N NDP sing 353 n n C4N H42N NDP sing 354 n n C5N C6N NDP doub 355 n n C5N H5N NDP sing 356 n n C6N H6N NDP sing 357 n n P2B O1X NDP doub 358 n n P2B O2X NDP sing 359 n n P2B O3X NDP sing 360 n n O2X HOP2 NDP sing 361 n n O3X HOP3 NDP sing 362 n n # _atom_sites.entry_id 3F0Q _atom_sites.fract_transf_matrix[1][1] 0.012632 _atom_sites.fract_transf_matrix[1][2] 0.007293 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014587 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP X 1 207 207 NDP NAP . C 3 52V X 1 158 1 52V 52V . D 4 HOH X 1 159 1 HOH HOH . D 4 HOH X 2 160 2 HOH HOH . D 4 HOH X 3 161 3 HOH HOH . D 4 HOH X 4 162 4 HOH HOH . D 4 HOH X 5 163 5 HOH HOH . D 4 HOH X 6 164 6 HOH HOH . D 4 HOH X 7 165 7 HOH HOH . D 4 HOH X 8 166 8 HOH HOH . D 4 HOH X 9 167 9 HOH HOH . D 4 HOH X 10 168 10 HOH HOH . D 4 HOH X 11 169 12 HOH HOH . D 4 HOH X 12 170 13 HOH HOH . D 4 HOH X 13 171 14 HOH HOH . D 4 HOH X 14 172 15 HOH HOH . D 4 HOH X 15 173 16 HOH HOH . D 4 HOH X 16 174 17 HOH HOH . D 4 HOH X 17 175 18 HOH HOH . D 4 HOH X 18 176 19 HOH HOH . D 4 HOH X 19 177 20 HOH HOH . D 4 HOH X 20 178 21 HOH HOH . D 4 HOH X 21 179 22 HOH HOH . D 4 HOH X 22 180 23 HOH HOH . D 4 HOH X 23 181 24 HOH HOH . D 4 HOH X 24 182 25 HOH HOH . D 4 HOH X 25 183 26 HOH HOH . D 4 HOH X 26 184 27 HOH HOH . D 4 HOH X 27 185 28 HOH HOH . D 4 HOH X 28 186 29 HOH HOH . D 4 HOH X 29 187 30 HOH HOH . D 4 HOH X 30 188 31 HOH HOH . D 4 HOH X 31 189 32 HOH HOH . D 4 HOH X 32 190 33 HOH HOH . D 4 HOH X 33 191 34 HOH HOH . D 4 HOH X 34 192 35 HOH HOH . D 4 HOH X 35 193 36 HOH HOH . D 4 HOH X 36 194 37 HOH HOH . D 4 HOH X 37 195 38 HOH HOH . D 4 HOH X 38 196 39 HOH HOH . D 4 HOH X 39 197 40 HOH HOH . D 4 HOH X 40 198 41 HOH HOH . D 4 HOH X 41 199 42 HOH HOH . D 4 HOH X 42 200 43 HOH HOH . D 4 HOH X 43 201 44 HOH HOH . D 4 HOH X 44 202 45 HOH HOH . D 4 HOH X 45 203 46 HOH HOH . D 4 HOH X 46 204 47 HOH HOH . D 4 HOH X 47 205 48 HOH HOH . D 4 HOH X 48 206 49 HOH HOH . D 4 HOH X 49 208 50 HOH HOH . D 4 HOH X 50 209 51 HOH HOH . D 4 HOH X 51 210 53 HOH HOH . D 4 HOH X 52 211 54 HOH HOH . D 4 HOH X 53 212 55 HOH HOH . D 4 HOH X 54 213 56 HOH HOH . D 4 HOH X 55 214 58 HOH HOH . D 4 HOH X 56 215 59 HOH HOH . D 4 HOH X 57 216 60 HOH HOH . D 4 HOH X 58 217 62 HOH HOH . D 4 HOH X 59 218 63 HOH HOH . D 4 HOH X 60 219 64 HOH HOH . D 4 HOH X 61 220 66 HOH HOH . D 4 HOH X 62 221 67 HOH HOH . D 4 HOH X 63 222 68 HOH HOH . D 4 HOH X 64 223 69 HOH HOH . D 4 HOH X 65 224 70 HOH HOH . D 4 HOH X 66 225 71 HOH HOH . D 4 HOH X 67 226 72 HOH HOH . D 4 HOH X 68 227 73 HOH HOH . D 4 HOH X 69 228 74 HOH HOH . D 4 HOH X 70 229 75 HOH HOH . D 4 HOH X 71 230 76 HOH HOH . D 4 HOH X 72 231 77 HOH HOH . D 4 HOH X 73 232 78 HOH HOH . D 4 HOH X 74 233 80 HOH HOH . D 4 HOH X 75 234 81 HOH HOH . D 4 HOH X 76 235 82 HOH HOH . D 4 HOH X 77 236 83 HOH HOH . D 4 HOH X 78 237 84 HOH HOH . D 4 HOH X 79 238 85 HOH HOH . D 4 HOH X 80 239 86 HOH HOH . D 4 HOH X 81 240 88 HOH HOH . D 4 HOH X 82 241 89 HOH HOH . D 4 HOH X 83 242 92 HOH HOH . D 4 HOH X 84 243 94 HOH HOH . D 4 HOH X 85 244 95 HOH HOH . D 4 HOH X 86 245 96 HOH HOH . D 4 HOH X 87 246 97 HOH HOH . D 4 HOH X 88 247 99 HOH HOH . D 4 HOH X 89 248 100 HOH HOH . D 4 HOH X 90 249 101 HOH HOH . D 4 HOH X 91 250 103 HOH HOH . D 4 HOH X 92 251 104 HOH HOH . D 4 HOH X 93 252 105 HOH HOH . D 4 HOH X 94 253 106 HOH HOH . D 4 HOH X 95 254 107 HOH HOH . D 4 HOH X 96 255 108 HOH HOH . D 4 HOH X 97 256 109 HOH HOH . D 4 HOH X 98 257 113 HOH HOH . D 4 HOH X 99 258 115 HOH HOH . D 4 HOH X 100 259 117 HOH HOH . D 4 HOH X 101 260 120 HOH HOH . D 4 HOH X 102 261 123 HOH HOH . D 4 HOH X 103 262 124 HOH HOH . D 4 HOH X 104 263 126 HOH HOH . D 4 HOH X 105 264 127 HOH HOH . D 4 HOH X 106 265 129 HOH HOH . D 4 HOH X 107 266 130 HOH HOH . D 4 HOH X 108 267 132 HOH HOH . D 4 HOH X 109 268 137 HOH HOH . D 4 HOH X 110 269 140 HOH HOH . D 4 HOH X 111 270 141 HOH HOH . D 4 HOH X 112 271 144 HOH HOH . D 4 HOH X 113 272 145 HOH HOH . D 4 HOH X 114 273 146 HOH HOH . D 4 HOH X 115 274 150 HOH HOH . D 4 HOH X 116 275 151 HOH HOH . D 4 HOH X 117 276 152 HOH HOH . D 4 HOH X 118 277 153 HOH HOH . D 4 HOH X 119 278 154 HOH HOH . D 4 HOH X 120 279 155 HOH HOH . D 4 HOH X 121 280 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 -23.747 -21.606 42.851 1 14.71 ? PA NDP 207 X 1 HETATM 2 O O1A NDP . . . B 2 -22.59 -21.176 42.026 1 13.56 ? O1A NDP 207 X 1 HETATM 3 O O2A NDP . . . B 2 -24.981 -20.857 42.552 1 16.43 ? O2A NDP 207 X 1 HETATM 4 O O5B NDP . . . B 2 -24.041 -23.16 42.58 1 16.95 ? O5B NDP 207 X 1 HETATM 5 C C5B NDP . . . B 2 -23.059 -24.156 42.719 1 16.43 ? C5B NDP 207 X 1 HETATM 6 C C4B NDP . . . B 2 -23.612 -25.33 41.937 1 16.96 ? C4B NDP 207 X 1 HETATM 7 O O4B NDP . . . B 2 -23.693 -25.027 40.554 1 17.08 ? O4B NDP 207 X 1 HETATM 8 C C3B NDP . . . B 2 -22.766 -26.578 42.027 1 17.26 ? C3B NDP 207 X 1 HETATM 9 O O3B NDP . . . B 2 -22.968 -27.257 43.254 1 16.78 ? O3B NDP 207 X 1 HETATM 10 C C2B NDP . . . B 2 -23.243 -27.31 40.775 1 15.89 ? C2B NDP 207 X 1 HETATM 11 O O2B NDP . . . B 2 -24.537 -27.842 40.915 1 14.61 ? O2B NDP 207 X 1 HETATM 12 C C1B NDP . . . B 2 -23.404 -26.172 39.782 1 16.53 ? C1B NDP 207 X 1 HETATM 13 N N9A NDP . . . B 2 -22.153 -26.043 39.016 1 17.61 ? N9A NDP 207 X 1 HETATM 14 C C8A NDP . . . B 2 -21.195 -25.059 39.117 1 17.05 ? C8A NDP 207 X 1 HETATM 15 N N7A NDP . . . B 2 -20.21 -25.346 38.237 1 17.85 ? N7A NDP 207 X 1 HETATM 16 C C5A NDP . . . B 2 -20.524 -26.489 37.578 1 17.24 ? C5A NDP 207 X 1 HETATM 17 C C6A NDP . . . B 2 -19.885 -27.224 36.586 1 17.45 ? C6A NDP 207 X 1 HETATM 18 N N6A NDP . . . B 2 -18.714 -26.83 36.092 1 18.02 ? N6A NDP 207 X 1 HETATM 19 N N1A NDP . . . B 2 -20.471 -28.377 36.1 1 17.29 ? N1A NDP 207 X 1 HETATM 20 C C2A NDP . . . B 2 -21.686 -28.818 36.597 1 17.32 ? C2A NDP 207 X 1 HETATM 21 N N3A NDP . . . B 2 -22.316 -28.089 37.588 1 18.01 ? N3A NDP 207 X 1 HETATM 22 C C4A NDP . . . B 2 -21.742 -26.942 38.066 1 17.58 ? C4A NDP 207 X 1 HETATM 23 O O3 NDP . . . B 2 -23.455 -21.693 44.411 1 16.95 ? O3 NDP 207 X 1 HETATM 24 P PN NDP . . . B 2 -22.495 -20.972 45.462 1 19.32 ? PN NDP 207 X 1 HETATM 25 O O1N NDP . . . B 2 -22.655 -21.675 46.744 1 17.73 ? O1N NDP 207 X 1 HETATM 26 O O2N NDP . . . B 2 -21.158 -20.787 44.881 1 17.83 ? O2N NDP 207 X 1 HETATM 27 O O5D NDP . . . B 2 -23.254 -19.524 45.621 1 18.94 ? O5D NDP 207 X 1 HETATM 28 C C5D NDP . . . B 2 -24.574 -19.331 46.12 1 17.98 ? C5D NDP 207 X 1 HETATM 29 C C4D NDP . . . B 2 -24.688 -17.957 46.817 1 19.47 ? C4D NDP 207 X 1 HETATM 30 O O4D NDP . . . B 2 -24.424 -16.863 45.936 1 19.72 ? O4D NDP 207 X 1 HETATM 31 C C3D NDP . . . B 2 -26.046 -17.656 47.446 1 19.69 ? C3D NDP 207 X 1 HETATM 32 O O3D NDP . . . B 2 -25.786 -17.113 48.725 1 17.45 ? O3D NDP 207 X 1 HETATM 33 C C2D NDP . . . B 2 -26.655 -16.563 46.584 1 18.01 ? C2D NDP 207 X 1 HETATM 34 O O2D NDP . . . B 2 -27.386 -15.652 47.365 1 18.52 ? O2D NDP 207 X 1 HETATM 35 C C1D NDP . . . B 2 -25.422 -15.849 46.082 1 17.46 ? C1D NDP 207 X 1 HETATM 36 N N1N NDP . . . B 2 -25.547 -15.001 44.871 1 16.29 ? N1N NDP 207 X 1 HETATM 37 C C2N NDP . . . B 2 -25.355 -13.664 45.025 1 15.05 ? C2N NDP 207 X 1 HETATM 38 C C3N NDP . . . B 2 -25.405 -12.807 43.942 1 16.86 ? C3N NDP 207 X 1 HETATM 39 C C7N NDP . . . B 2 -25.133 -11.347 44.126 1 15.97 ? C7N NDP 207 X 1 HETATM 40 O O7N NDP . . . B 2 -25.081 -10.579 42.971 1 13.46 ? O7N NDP 207 X 1 HETATM 41 N N7N NDP . . . B 2 -24.963 -10.803 45.339 1 17.35 ? N7N NDP 207 X 1 HETATM 42 C C4N NDP . . . B 2 -25.661 -13.318 42.664 1 17.74 ? C4N NDP 207 X 1 HETATM 43 C C5N NDP . . . B 2 -25.867 -14.693 42.52 1 18.01 ? C5N NDP 207 X 1 HETATM 44 C C6N NDP . . . B 2 -25.784 -15.521 43.631 1 16.47 ? C6N NDP 207 X 1 HETATM 45 P P2B NDP . . . B 2 -24.818 -29.367 41.397 1 14.99 ? P2B NDP 207 X 1 HETATM 46 O O1X NDP . . . B 2 -24.293 -29.505 42.793 1 12.81 ? O1X NDP 207 X 1 HETATM 47 O O2X NDP . . . B 2 -26.303 -29.55 41.341 1 13.61 ? O2X NDP 207 X 1 HETATM 48 O O3X NDP . . . B 2 -24.071 -30.259 40.447 1 13.95 ? O3X NDP 207 X 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 48 #