data_3F0X # _model_server_result.job_id 0w0YN_aV_BI_R7cHX6b-6A _model_server_result.datetime_utc '2025-02-26 03:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":207}' # _entry.id 3F0X # _exptl.entry_id 3F0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3F0X _cell.length_a 79.048 _cell.length_b 79.048 _cell.length_c 108.727 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 281 n n PA O2A NDP sing 282 n n PA O5B NDP sing 283 n n PA O3 NDP sing 284 n n O2A HOA2 NDP sing 285 n n O5B C5B NDP sing 286 n n C5B C4B NDP sing 287 n n C5B H51A NDP sing 288 n n C5B H52A NDP sing 289 n n C4B O4B NDP sing 290 n n C4B C3B NDP sing 291 n n C4B H4B NDP sing 292 n n O4B C1B NDP sing 293 n n C3B O3B NDP sing 294 n n C3B C2B NDP sing 295 n n C3B H3B NDP sing 296 n n O3B HO3A NDP sing 297 n n C2B O2B NDP sing 298 n n C2B C1B NDP sing 299 n n C2B H2B NDP sing 300 n n O2B P2B NDP sing 301 n n C1B N9A NDP sing 302 n n C1B H1B NDP sing 303 n n N9A C8A NDP sing 304 n y N9A C4A NDP sing 305 n y C8A N7A NDP doub 306 n y C8A H8A NDP sing 307 n n N7A C5A NDP sing 308 n y C5A C6A NDP sing 309 n y C5A C4A NDP doub 310 n y C6A N6A NDP sing 311 n n C6A N1A NDP doub 312 n y N6A H61A NDP sing 313 n n N6A H62A NDP sing 314 n n N1A C2A NDP sing 315 n y C2A N3A NDP doub 316 n y C2A H2A NDP sing 317 n n N3A C4A NDP sing 318 n y O3 PN NDP sing 319 n n PN O1N NDP doub 320 n n PN O2N NDP sing 321 n n PN O5D NDP sing 322 n n O2N H21N NDP sing 323 n n O5D C5D NDP sing 324 n n C5D C4D NDP sing 325 n n C5D H51N NDP sing 326 n n C5D H52N NDP sing 327 n n C4D O4D NDP sing 328 n n C4D C3D NDP sing 329 n n C4D H4D NDP sing 330 n n O4D C1D NDP sing 331 n n C3D O3D NDP sing 332 n n C3D C2D NDP sing 333 n n C3D H3D NDP sing 334 n n O3D HO3N NDP sing 335 n n C2D O2D NDP sing 336 n n C2D C1D NDP sing 337 n n C2D H2D NDP sing 338 n n O2D HO2N NDP sing 339 n n C1D N1N NDP sing 340 n n C1D H1D NDP sing 341 n n N1N C2N NDP sing 342 n n N1N C6N NDP sing 343 n n C2N C3N NDP doub 344 n n C2N H2N NDP sing 345 n n C3N C7N NDP sing 346 n n C3N C4N NDP sing 347 n n C7N O7N NDP doub 348 n n C7N N7N NDP sing 349 n n N7N H71N NDP sing 350 n n N7N H72N NDP sing 351 n n C4N C5N NDP sing 352 n n C4N H41N NDP sing 353 n n C4N H42N NDP sing 354 n n C5N C6N NDP doub 355 n n C5N H5N NDP sing 356 n n C6N H6N NDP sing 357 n n P2B O1X NDP doub 358 n n P2B O2X NDP sing 359 n n P2B O3X NDP sing 360 n n O2X HOP2 NDP sing 361 n n O3X HOP3 NDP sing 362 n n # _atom_sites.entry_id 3F0X _atom_sites.fract_transf_matrix[1][1] 0.012651 _atom_sites.fract_transf_matrix[1][2] 0.007304 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014608 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP X 1 207 207 NDP NAP . C 3 53T X 1 158 1 53T 53T . D 4 HOH X 1 159 1 HOH HOH . D 4 HOH X 2 160 2 HOH HOH . D 4 HOH X 3 161 3 HOH HOH . D 4 HOH X 4 162 4 HOH HOH . D 4 HOH X 5 163 5 HOH HOH . D 4 HOH X 6 164 6 HOH HOH . D 4 HOH X 7 165 1 HOH HOH . D 4 HOH X 8 166 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . A . B 2 -23.7 -21.827 42.535 0.7 15.59 ? PA NDP 207 X 1 HETATM 2 P PA NDP . B . B 2 -23.523 -21.47 42.707 0.3 2 ? PA NDP 207 X 1 HETATM 3 O O1A NDP . A . B 2 -22.655 -21.56 41.518 0.7 14.93 ? O1A NDP 207 X 1 HETATM 4 O O1A NDP . B . B 2 -22.295 -20.987 42.032 0.3 2 ? O1A NDP 207 X 1 HETATM 5 O O2A NDP . A . B 2 -24.948 -21.065 42.282 0.7 14.46 ? O2A NDP 207 X 1 HETATM 6 O O2A NDP . B . B 2 -24.631 -20.505 42.552 0.3 2 ? O2A NDP 207 X 1 HETATM 7 O O5B NDP . A . B 2 -23.986 -23.41 42.66 0.7 15.82 ? O5B NDP 207 X 1 HETATM 8 O O5B NDP . B . B 2 -23.962 -22.889 42.088 0.3 2 ? O5B NDP 207 X 1 HETATM 9 C C5B NDP . A . B 2 -22.925 -24.344 42.648 0.7 15.6 ? C5B NDP 207 X 1 HETATM 10 C C5B NDP . B . B 2 -23.004 -23.846 41.697 0.3 2 ? C5B NDP 207 X 1 HETATM 11 C C4B NDP . A . B 2 -23.323 -25.477 41.725 0.7 15.97 ? C4B NDP 207 X 1 HETATM 12 C C4B NDP . B . B 2 -23.733 -25.158 41.458 0.3 2 ? C4B NDP 207 X 1 HETATM 13 O O4B NDP . A . B 2 -23.364 -25.074 40.365 0.7 16.49 ? O4B NDP 207 X 1 HETATM 14 O O4B NDP . B . B 2 -23.929 -25.388 40.068 0.3 2 ? O4B NDP 207 X 1 HETATM 15 C C3B NDP . A . B 2 -22.373 -26.656 41.73 0.7 15.72 ? C3B NDP 207 X 1 HETATM 16 C C3B NDP . B . B 2 -22.948 -26.346 41.985 0.3 2 ? C3B NDP 207 X 1 HETATM 17 O O3B NDP . A . B 2 -22.481 -27.439 42.894 0.7 15.25 ? O3B NDP 207 X 1 HETATM 18 O O3B NDP . B . B 2 -23.267 -26.628 43.328 0.3 2 ? O3B NDP 207 X 1 HETATM 19 C C2B NDP . A . B 2 -22.864 -27.347 40.476 0.7 15.75 ? C2B NDP 207 X 1 HETATM 20 C C2B NDP . B . B 2 -23.339 -27.443 41.014 0.3 2 ? C2B NDP 207 X 1 HETATM 21 O O2B NDP . A . B 2 -24.159 -27.845 40.669 0.7 15.57 ? O2B NDP 207 X 1 HETATM 22 O O2B NDP . B . B 2 -24.602 -27.972 41.344 0.3 2 ? O2B NDP 207 X 1 HETATM 23 C C1B NDP . A . B 2 -23.058 -26.178 39.533 0.7 15.82 ? C1B NDP 207 X 1 HETATM 24 C C1B NDP . B . B 2 -23.504 -26.69 39.709 0.3 2 ? C1B NDP 207 X 1 HETATM 25 N N9A NDP . A . B 2 -21.816 -25.981 38.759 0.7 15.78 ? N9A NDP 207 X 1 HETATM 26 N N9A NDP . B . B 2 -22.218 -26.651 38.976 0.3 2 ? N9A NDP 207 X 1 HETATM 27 C C8A NDP . A . B 2 -20.907 -24.957 38.871 0.7 15.85 ? C8A NDP 207 X 1 HETATM 28 C C8A NDP . B . B 2 -21.166 -25.8 39.206 0.3 2 ? C8A NDP 207 X 1 HETATM 29 N N7A NDP . A . B 2 -19.907 -25.169 37.977 0.7 16.05 ? N7A NDP 207 X 1 HETATM 30 N N7A NDP . B . B 2 -20.174 -26.084 38.334 0.3 2.19 ? N7A NDP 207 X 1 HETATM 31 C C5A NDP . A . B 2 -20.164 -26.319 37.303 0.7 16.1 ? C5A NDP 207 X 1 HETATM 32 C C5A NDP . B . B 2 -20.572 -27.102 37.545 0.3 2 ? C5A NDP 207 X 1 HETATM 33 C C6A NDP . A . B 2 -19.496 -27.003 36.29 0.7 15.73 ? C6A NDP 207 X 1 HETATM 34 C C6A NDP . B . B 2 -19.952 -27.77 36.498 0.3 2 ? C6A NDP 207 X 1 HETATM 35 N N6A NDP . A . B 2 -18.353 -26.546 35.791 0.7 15.87 ? N6A NDP 207 X 1 HETATM 36 N N6A NDP . B . B 2 -18.726 -27.426 36.116 0.3 2 ? N6A NDP 207 X 1 HETATM 37 N N1A NDP . A . B 2 -20.021 -28.175 35.792 0.7 15.9 ? N1A NDP 207 X 1 HETATM 38 N N1A NDP . B . B 2 -20.614 -28.798 35.855 0.3 2 ? N1A NDP 207 X 1 HETATM 39 C C2A NDP . A . B 2 -21.208 -28.672 36.287 0.7 15.83 ? C2A NDP 207 X 1 HETATM 40 C C2A NDP . B . B 2 -21.888 -29.158 36.253 0.3 2 ? C2A NDP 207 X 1 HETATM 41 N N3A NDP . A . B 2 -21.863 -27.99 37.287 0.7 16.12 ? N3A NDP 207 X 1 HETATM 42 N N3A NDP . B . B 2 -22.494 -28.485 37.297 0.3 2.16 ? N3A NDP 207 X 1 HETATM 43 C C4A NDP . A . B 2 -21.357 -26.836 37.788 0.7 15.83 ? C4A NDP 207 X 1 HETATM 44 C C4A NDP . B . B 2 -21.853 -27.471 37.936 0.3 2 ? C4A NDP 207 X 1 HETATM 45 O O3 NDP . A . B 2 -23.155 -21.422 43.99 0.7 14.5 ? O3 NDP 207 X 1 HETATM 46 O O3 NDP . B . B 2 -23.238 -21.772 44.268 0.3 2 ? O3 NDP 207 X 1 HETATM 47 P PN NDP . A . B 2 -21.859 -21.775 44.858 0.7 13.84 ? PN NDP 207 X 1 HETATM 48 P PN NDP . B . B 2 -22.65 -20.831 45.437 0.3 2 ? PN NDP 207 X 1 HETATM 49 O O1N NDP . A . B 2 -21.279 -23.081 44.476 0.7 15 ? O1N NDP 207 X 1 HETATM 50 O O1N NDP . B . B 2 -21.935 -21.698 46.396 0.3 2 ? O1N NDP 207 X 1 HETATM 51 O O2N NDP . A . B 2 -20.986 -20.588 44.934 0.7 13.6 ? O2N NDP 207 X 1 HETATM 52 O O2N NDP . B . B 2 -21.911 -19.731 44.797 0.3 2 ? O2N NDP 207 X 1 HETATM 53 O O5D NDP . A . B 2 -22.595 -21.962 46.264 0.7 15.07 ? O5D NDP 207 X 1 HETATM 54 O O5D NDP . B . B 2 -23.941 -20.194 46.175 0.3 2 ? O5D NDP 207 X 1 HETATM 55 C C5D NDP . A . B 2 -22.406 -21.001 47.271 0.7 15.27 ? C5D NDP 207 X 1 HETATM 56 C C5D NDP . B . B 2 -24.765 -19.219 45.57 0.3 2 ? C5D NDP 207 X 1 HETATM 57 C C4D NDP . A . B 2 -23.642 -20.131 47.481 0.7 15.09 ? C4D NDP 207 X 1 HETATM 58 C C4D NDP . B . B 2 -24.995 -18.068 46.545 0.3 2 ? C4D NDP 207 X 1 HETATM 59 O O4D NDP . A . B 2 -23.917 -19.145 46.486 0.7 14.82 ? O4D NDP 207 X 1 HETATM 60 O O4D NDP . B . B 2 -24.448 -16.86 46.037 0.3 2 ? O4D NDP 207 X 1 HETATM 61 C C3D NDP . A . B 2 -24.951 -20.888 47.713 0.7 15.52 ? C3D NDP 207 X 1 HETATM 62 C C3D NDP . B . B 2 -26.477 -17.827 46.808 0.3 2 ? C3D NDP 207 X 1 HETATM 63 O O3D NDP . A . B 2 -25.139 -20.995 49.107 0.7 14.71 ? O3D NDP 207 X 1 HETATM 64 O O3D NDP . B . B 2 -26.756 -18.003 48.176 0.3 2 ? O3D NDP 207 X 1 HETATM 65 C C2D NDP . A . B 2 -25.988 -19.97 47.096 0.7 15.67 ? C2D NDP 207 X 1 HETATM 66 C C2D NDP . B . B 2 -26.746 -16.391 46.398 0.3 2 ? C2D NDP 207 X 1 HETATM 67 O O2D NDP . A . B 2 -27.059 -19.76 47.976 0.7 16.41 ? O2D NDP 207 X 1 HETATM 68 O O2D NDP . B . B 2 -27.421 -15.682 47.411 0.3 2 ? O2D NDP 207 X 1 HETATM 69 C C1D NDP . A . B 2 -25.137 -18.716 47.061 0.7 16.71 ? C1D NDP 207 X 1 HETATM 70 C C1D NDP . B . B 2 -25.373 -15.783 46.144 0.3 2 ? C1D NDP 207 X 1 HETATM 71 N N1N NDP . A . B 2 -25.792 -17.419 46.731 0.7 17.44 ? N1N NDP 207 X 1 HETATM 72 N N1N NDP . B . B 2 -25.35 -14.945 44.924 0.3 2 ? N1N NDP 207 X 1 HETATM 73 C C2N NDP . A . B 2 -25.67 -16.76 45.526 0.7 17.76 ? C2N NDP 207 X 1 HETATM 74 C C2N NDP . B . B 2 -25.322 -13.574 45.028 0.3 2 ? C2N NDP 207 X 1 HETATM 75 C C3N NDP . A . B 2 -26.32 -15.533 45.358 0.7 18.36 ? C3N NDP 207 X 1 HETATM 76 C C3N NDP . B . B 2 -25.291 -12.755 43.889 0.3 2 ? C3N NDP 207 X 1 HETATM 77 C C7N NDP . A . B 2 -25.873 -14.566 44.304 0.7 19.49 ? C7N NDP 207 X 1 HETATM 78 C C7N NDP . B . B 2 -25.089 -11.267 43.989 0.3 2 ? C7N NDP 207 X 1 HETATM 79 O O7N NDP . A . B 2 -25.533 -15.029 43.019 0.7 20.63 ? O7N NDP 207 X 1 HETATM 80 O O7N NDP . B . B 2 -24.896 -10.526 42.817 0.3 2 ? O7N NDP 207 X 1 HETATM 81 N N7N NDP . A . B 2 -25.822 -13.269 44.614 0.7 20.52 ? N7N NDP 207 X 1 HETATM 82 N N7N NDP . B . B 2 -25.094 -10.666 45.17 0.3 2 ? N7N NDP 207 X 1 HETATM 83 C C4N NDP . A . B 2 -27.079 -15.004 46.405 0.7 18.01 ? C4N NDP 207 X 1 HETATM 84 C C4N NDP . B . B 2 -25.285 -13.347 42.629 0.3 2 ? C4N NDP 207 X 1 HETATM 85 C C5N NDP . A . B 2 -27.184 -15.669 47.615 0.7 17.41 ? C5N NDP 207 X 1 HETATM 86 C C5N NDP . B . B 2 -25.317 -14.733 42.54 0.3 2 ? C5N NDP 207 X 1 HETATM 87 C C6N NDP . A . B 2 -26.522 -16.876 47.759 0.7 16.4 ? C6N NDP 207 X 1 HETATM 88 C C6N NDP . B . B 2 -25.348 -15.527 43.686 0.3 2 ? C6N NDP 207 X 1 HETATM 89 P P2B NDP . A . B 2 -24.441 -29.387 41 0.7 15.85 ? P2B NDP 207 X 1 HETATM 90 P P2B NDP . B . B 2 -24.787 -29.526 41.709 0.3 2 ? P2B NDP 207 X 1 HETATM 91 O O1X NDP . A . B 2 -23.799 -29.709 42.338 0.7 15.49 ? O1X NDP 207 X 1 HETATM 92 O O1X NDP . B . B 2 -24.167 -29.747 43.076 0.3 2 ? O1X NDP 207 X 1 HETATM 93 O O2X NDP . A . B 2 -25.94 -29.589 41.064 0.7 15.05 ? O2X NDP 207 X 1 HETATM 94 O O2X NDP . B . B 2 -26.262 -29.862 41.741 0.3 2 ? O2X NDP 207 X 1 HETATM 95 O O3X NDP . A . B 2 -23.841 -30.232 39.902 0.7 15.49 ? O3X NDP 207 X 1 HETATM 96 O O3X NDP . B . B 2 -24.106 -30.39 40.67 0.3 2 ? O3X NDP 207 X 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 96 #