data_3F1N # _model_server_result.job_id wmA60ni_dVqVEnlMwuWsrw _model_server_result.datetime_utc '2024-10-17 08:33:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f1n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":3}' # _entry.id 3F1N # _exptl.entry_id 3F1N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.08 _cell.angle_gamma 90 _cell.entry_id 3F1N _cell.length_a 73.321 _cell.length_b 82.908 _cell.length_c 41.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F1N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3F1N _atom_sites.fract_transf_matrix[1][1] 0.013639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003931 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025138 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 1 1 EDO EDO . D 3 EDO A 1 2 2 EDO EDO . E 3 EDO A 1 3 3 EDO EDO . F 4 HOH A 1 7 7 HOH HOH . F 4 HOH A 2 8 8 HOH HOH . F 4 HOH A 3 10 10 HOH HOH . F 4 HOH A 4 13 13 HOH HOH . F 4 HOH A 5 16 16 HOH HOH . F 4 HOH A 6 17 17 HOH HOH . F 4 HOH A 7 20 20 HOH HOH . F 4 HOH A 8 23 23 HOH HOH . F 4 HOH A 9 27 27 HOH HOH . F 4 HOH A 10 28 28 HOH HOH . F 4 HOH A 11 30 30 HOH HOH . F 4 HOH A 12 33 33 HOH HOH . F 4 HOH A 13 36 36 HOH HOH . F 4 HOH A 14 37 37 HOH HOH . F 4 HOH A 15 38 38 HOH HOH . F 4 HOH A 16 39 39 HOH HOH . F 4 HOH A 17 41 41 HOH HOH . F 4 HOH A 18 42 42 HOH HOH . F 4 HOH A 19 44 44 HOH HOH . F 4 HOH A 20 45 45 HOH HOH . F 4 HOH A 21 48 48 HOH HOH . F 4 HOH A 22 49 49 HOH HOH . F 4 HOH A 23 53 53 HOH HOH . F 4 HOH A 24 57 57 HOH HOH . F 4 HOH A 25 60 60 HOH HOH . F 4 HOH A 26 61 61 HOH HOH . F 4 HOH A 27 63 63 HOH HOH . F 4 HOH A 28 66 66 HOH HOH . F 4 HOH A 29 67 67 HOH HOH . F 4 HOH A 30 68 68 HOH HOH . F 4 HOH A 31 70 70 HOH HOH . F 4 HOH A 32 74 74 HOH HOH . F 4 HOH A 33 79 79 HOH HOH . F 4 HOH A 34 83 83 HOH HOH . F 4 HOH A 35 86 86 HOH HOH . F 4 HOH A 36 87 87 HOH HOH . F 4 HOH A 37 91 91 HOH HOH . F 4 HOH A 38 92 92 HOH HOH . F 4 HOH A 39 99 99 HOH HOH . F 4 HOH A 40 100 100 HOH HOH . F 4 HOH A 41 101 101 HOH HOH . F 4 HOH A 42 102 102 HOH HOH . F 4 HOH A 43 104 104 HOH HOH . F 4 HOH A 44 105 105 HOH HOH . F 4 HOH A 45 106 106 HOH HOH . F 4 HOH A 46 108 108 HOH HOH . F 4 HOH A 47 109 109 HOH HOH . F 4 HOH A 48 110 110 HOH HOH . F 4 HOH A 49 113 113 HOH HOH . F 4 HOH A 50 115 115 HOH HOH . F 4 HOH A 51 116 116 HOH HOH . F 4 HOH A 52 118 118 HOH HOH . F 4 HOH A 53 120 120 HOH HOH . F 4 HOH A 54 121 121 HOH HOH . F 4 HOH A 55 123 123 HOH HOH . F 4 HOH A 56 124 124 HOH HOH . F 4 HOH A 57 126 126 HOH HOH . F 4 HOH A 58 129 129 HOH HOH . F 4 HOH A 59 132 132 HOH HOH . F 4 HOH A 60 135 135 HOH HOH . F 4 HOH A 61 136 136 HOH HOH . F 4 HOH A 62 141 141 HOH HOH . F 4 HOH A 63 142 142 HOH HOH . F 4 HOH A 64 145 145 HOH HOH . F 4 HOH A 65 146 146 HOH HOH . F 4 HOH A 66 148 148 HOH HOH . F 4 HOH A 67 151 151 HOH HOH . F 4 HOH A 68 152 152 HOH HOH . F 4 HOH A 69 154 154 HOH HOH . F 4 HOH A 70 155 155 HOH HOH . F 4 HOH A 71 157 157 HOH HOH . F 4 HOH A 72 159 159 HOH HOH . F 4 HOH A 73 161 161 HOH HOH . F 4 HOH A 74 162 162 HOH HOH . F 4 HOH A 75 165 165 HOH HOH . F 4 HOH A 76 168 168 HOH HOH . F 4 HOH A 77 169 169 HOH HOH . F 4 HOH A 78 170 170 HOH HOH . F 4 HOH A 79 172 172 HOH HOH . F 4 HOH A 80 173 173 HOH HOH . F 4 HOH A 81 174 174 HOH HOH . G 4 HOH B 1 1 1 HOH HOH . G 4 HOH B 2 2 2 HOH HOH . G 4 HOH B 3 3 3 HOH HOH . G 4 HOH B 4 4 4 HOH HOH . G 4 HOH B 5 5 5 HOH HOH . G 4 HOH B 6 6 6 HOH HOH . G 4 HOH B 7 9 9 HOH HOH . G 4 HOH B 8 11 11 HOH HOH . G 4 HOH B 9 12 12 HOH HOH . G 4 HOH B 10 14 14 HOH HOH . G 4 HOH B 11 15 15 HOH HOH . G 4 HOH B 12 18 18 HOH HOH . G 4 HOH B 13 19 19 HOH HOH . G 4 HOH B 14 21 21 HOH HOH . G 4 HOH B 15 22 22 HOH HOH . G 4 HOH B 16 24 24 HOH HOH . G 4 HOH B 17 25 25 HOH HOH . G 4 HOH B 18 26 26 HOH HOH . G 4 HOH B 19 29 29 HOH HOH . G 4 HOH B 20 31 31 HOH HOH . G 4 HOH B 21 32 32 HOH HOH . G 4 HOH B 22 34 34 HOH HOH . G 4 HOH B 23 35 35 HOH HOH . G 4 HOH B 24 40 40 HOH HOH . G 4 HOH B 25 43 43 HOH HOH . G 4 HOH B 26 46 46 HOH HOH . G 4 HOH B 27 47 47 HOH HOH . G 4 HOH B 28 50 50 HOH HOH . G 4 HOH B 29 51 51 HOH HOH . G 4 HOH B 30 52 52 HOH HOH . G 4 HOH B 31 54 54 HOH HOH . G 4 HOH B 32 55 55 HOH HOH . G 4 HOH B 33 56 56 HOH HOH . G 4 HOH B 34 58 58 HOH HOH . G 4 HOH B 35 59 59 HOH HOH . G 4 HOH B 36 62 62 HOH HOH . G 4 HOH B 37 64 64 HOH HOH . G 4 HOH B 38 65 65 HOH HOH . G 4 HOH B 39 69 69 HOH HOH . G 4 HOH B 40 71 71 HOH HOH . G 4 HOH B 41 72 72 HOH HOH . G 4 HOH B 42 73 73 HOH HOH . G 4 HOH B 43 75 75 HOH HOH . G 4 HOH B 44 76 76 HOH HOH . G 4 HOH B 45 77 77 HOH HOH . G 4 HOH B 46 78 78 HOH HOH . G 4 HOH B 47 80 80 HOH HOH . G 4 HOH B 48 81 81 HOH HOH . G 4 HOH B 49 82 82 HOH HOH . G 4 HOH B 50 84 84 HOH HOH . G 4 HOH B 51 85 85 HOH HOH . G 4 HOH B 52 88 88 HOH HOH . G 4 HOH B 53 89 89 HOH HOH . G 4 HOH B 54 90 90 HOH HOH . G 4 HOH B 55 93 93 HOH HOH . G 4 HOH B 56 94 94 HOH HOH . G 4 HOH B 57 95 95 HOH HOH . G 4 HOH B 58 96 96 HOH HOH . G 4 HOH B 59 97 97 HOH HOH . G 4 HOH B 60 98 98 HOH HOH . G 4 HOH B 61 103 103 HOH HOH . G 4 HOH B 62 107 107 HOH HOH . G 4 HOH B 63 111 111 HOH HOH . G 4 HOH B 64 112 112 HOH HOH . G 4 HOH B 65 114 114 HOH HOH . G 4 HOH B 66 117 117 HOH HOH . G 4 HOH B 67 119 119 HOH HOH . G 4 HOH B 68 122 122 HOH HOH . G 4 HOH B 69 125 125 HOH HOH . G 4 HOH B 70 127 127 HOH HOH . G 4 HOH B 71 128 128 HOH HOH . G 4 HOH B 72 130 130 HOH HOH . G 4 HOH B 73 131 131 HOH HOH . G 4 HOH B 74 133 133 HOH HOH . G 4 HOH B 75 134 134 HOH HOH . G 4 HOH B 76 137 137 HOH HOH . G 4 HOH B 77 138 138 HOH HOH . G 4 HOH B 78 139 139 HOH HOH . G 4 HOH B 79 140 140 HOH HOH . G 4 HOH B 80 143 143 HOH HOH . G 4 HOH B 81 144 144 HOH HOH . G 4 HOH B 82 147 147 HOH HOH . G 4 HOH B 83 149 149 HOH HOH . G 4 HOH B 84 150 150 HOH HOH . G 4 HOH B 85 153 153 HOH HOH . G 4 HOH B 86 156 156 HOH HOH . G 4 HOH B 87 158 158 HOH HOH . G 4 HOH B 88 160 160 HOH HOH . G 4 HOH B 89 163 163 HOH HOH . G 4 HOH B 90 164 164 HOH HOH . G 4 HOH B 91 166 166 HOH HOH . G 4 HOH B 92 171 171 HOH HOH . G 4 HOH B 93 175 175 HOH HOH . G 4 HOH B 94 176 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 18.229 -30.607 8.652 0.85 25.92 ? C1 EDO 3 A 1 HETATM 2 O O1 EDO . . . E 3 18.256 -30.066 7.353 0.85 20.53 ? O1 EDO 3 A 1 HETATM 3 C C2 EDO . . . E 3 19.291 -30.018 9.553 0.85 27.11 ? C2 EDO 3 A 1 HETATM 4 O O2 EDO . . . E 3 20.563 -30.17 8.961 0.85 26.42 ? O2 EDO 3 A 1 HETATM 5 H H11 EDO . . . E 3 18.379 -31.675 8.588 0.85 31.13 ? H11 EDO 3 A 1 HETATM 6 H H12 EDO . . . E 3 17.259 -30.418 9.088 0.85 31.13 ? H12 EDO 3 A 1 HETATM 7 H HO1 EDO . . . E 3 18.936 -29.228 7.325 0.85 24.66 ? HO1 EDO 3 A 1 HETATM 8 H H21 EDO . . . E 3 19.276 -30.527 10.505 0.85 32.55 ? H21 EDO 3 A 1 HETATM 9 H H22 EDO . . . E 3 19.09 -28.968 9.704 0.85 32.55 ? H22 EDO 3 A 1 HETATM 10 H HO2 EDO . . . E 3 20.884 -31.197 9.054 0.85 31.73 ? HO2 EDO 3 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #