data_3F3A # _model_server_result.job_id ULCT9HwZ8qyhcZwzmS-dUg _model_server_result.datetime_utc '2024-10-14 01:20:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f3a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 3F3A # _exptl.entry_id 3F3A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.33 _cell.angle_gamma 90 _cell.entry_id 3F3A _cell.length_a 88.566 _cell.length_b 85.218 _cell.length_c 82.274 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F3A _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1,y,-z-1 -1 0 0 0 1 0 0 0 -1 -83.786971 0 -82.135084 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 384 n n N H TRP sing 385 n n N H2 TRP sing 386 n n CA C TRP sing 387 n n CA CB TRP sing 388 n n CA HA TRP sing 389 n n C O TRP doub 390 n n C OXT TRP sing 391 n n CB CG TRP sing 392 n n CB HB2 TRP sing 393 n n CB HB3 TRP sing 394 n n CG CD1 TRP doub 395 n y CG CD2 TRP sing 396 n y CD1 NE1 TRP sing 397 n y CD1 HD1 TRP sing 398 n n CD2 CE2 TRP doub 399 n y CD2 CE3 TRP sing 400 n y NE1 CE2 TRP sing 401 n y NE1 HE1 TRP sing 402 n n CE2 CZ2 TRP sing 403 n y CE3 CZ3 TRP doub 404 n y CE3 HE3 TRP sing 405 n n CZ2 CH2 TRP doub 406 n y CZ2 HZ2 TRP sing 407 n n CZ3 CH2 TRP sing 408 n y CZ3 HZ3 TRP sing 409 n n CH2 HH2 TRP sing 410 n n OXT HXT TRP sing 411 n n # _atom_sites.entry_id 3F3A _atom_sites.fract_transf_matrix[1][1] 0.011291 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000657 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011735 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRP A 1 601 601 TRP TRP . C 2 TRP A 1 602 602 TRP TRP . D 2 TRP A 1 603 603 TRP TRP . E 2 TRP A 1 604 604 TRP TRP . F 3 BOG A 1 701 701 BOG BOG . G 3 BOG A 1 702 702 BOG BOG . H 3 BOG A 1 703 703 BOG BOG . I 3 BOG A 1 704 704 BOG BOG . J 3 BOG A 1 705 705 BOG BOG . K 3 BOG A 1 706 706 BOG BOG . L 4 C14 A 1 707 707 C14 C14 . M 3 BOG A 1 708 708 BOG BOG . N 5 NA A 1 751 751 NA NA . O 5 NA A 1 752 752 NA NA . P 6 HOH A 1 520 1 HOH HOH . P 6 HOH A 2 521 2 HOH HOH . P 6 HOH A 3 522 3 HOH HOH . P 6 HOH A 4 523 4 HOH HOH . P 6 HOH A 5 524 5 HOH HOH . P 6 HOH A 6 525 6 HOH HOH . P 6 HOH A 7 526 7 HOH HOH . P 6 HOH A 8 527 8 HOH HOH . P 6 HOH A 9 528 9 HOH HOH . P 6 HOH A 10 529 10 HOH HOH . P 6 HOH A 11 530 11 HOH HOH . P 6 HOH A 12 531 12 HOH HOH . P 6 HOH A 13 532 13 HOH HOH . P 6 HOH A 14 533 14 HOH HOH . P 6 HOH A 15 534 15 HOH HOH . P 6 HOH A 16 535 16 HOH HOH . P 6 HOH A 17 536 17 HOH HOH . P 6 HOH A 18 537 18 HOH HOH . P 6 HOH A 19 538 19 HOH HOH . P 6 HOH A 20 539 20 HOH HOH . P 6 HOH A 21 540 21 HOH HOH . P 6 HOH A 22 541 22 HOH HOH . P 6 HOH A 23 542 23 HOH HOH . P 6 HOH A 24 543 24 HOH HOH . P 6 HOH A 25 544 25 HOH HOH . P 6 HOH A 26 545 26 HOH HOH . P 6 HOH A 27 546 27 HOH HOH . P 6 HOH A 28 547 28 HOH HOH . P 6 HOH A 29 548 29 HOH HOH . P 6 HOH A 30 549 30 HOH HOH . P 6 HOH A 31 550 31 HOH HOH . P 6 HOH A 32 551 32 HOH HOH . P 6 HOH A 33 552 33 HOH HOH . P 6 HOH A 34 553 34 HOH HOH . P 6 HOH A 35 554 35 HOH HOH . P 6 HOH A 36 555 36 HOH HOH . P 6 HOH A 37 556 37 HOH HOH . P 6 HOH A 38 557 38 HOH HOH . P 6 HOH A 39 558 39 HOH HOH . P 6 HOH A 40 559 40 HOH HOH . P 6 HOH A 41 560 41 HOH HOH . P 6 HOH A 42 561 42 HOH HOH . P 6 HOH A 43 562 43 HOH HOH . P 6 HOH A 44 563 44 HOH HOH . P 6 HOH A 45 564 45 HOH HOH . P 6 HOH A 46 565 46 HOH HOH . P 6 HOH A 47 566 47 HOH HOH . P 6 HOH A 48 567 48 HOH HOH . P 6 HOH A 49 568 49 HOH HOH . P 6 HOH A 50 569 50 HOH HOH . P 6 HOH A 51 570 51 HOH HOH . P 6 HOH A 52 571 52 HOH HOH . P 6 HOH A 53 572 53 HOH HOH . P 6 HOH A 54 573 54 HOH HOH . P 6 HOH A 55 574 55 HOH HOH . P 6 HOH A 56 575 56 HOH HOH . P 6 HOH A 57 576 57 HOH HOH . P 6 HOH A 58 577 58 HOH HOH . P 6 HOH A 59 578 59 HOH HOH . P 6 HOH A 60 579 60 HOH HOH . P 6 HOH A 61 580 61 HOH HOH . P 6 HOH A 62 581 62 HOH HOH . P 6 HOH A 63 582 63 HOH HOH . P 6 HOH A 64 583 64 HOH HOH . P 6 HOH A 65 584 65 HOH HOH . P 6 HOH A 66 585 66 HOH HOH . P 6 HOH A 67 586 67 HOH HOH . P 6 HOH A 68 587 68 HOH HOH . P 6 HOH A 69 588 69 HOH HOH . P 6 HOH A 70 589 70 HOH HOH . P 6 HOH A 71 590 71 HOH HOH . P 6 HOH A 72 591 72 HOH HOH . P 6 HOH A 73 592 73 HOH HOH . P 6 HOH A 74 593 74 HOH HOH . P 6 HOH A 75 594 75 HOH HOH . P 6 HOH A 76 595 76 HOH HOH . P 6 HOH A 77 596 77 HOH HOH . P 6 HOH A 78 597 78 HOH HOH . P 6 HOH A 79 598 79 HOH HOH . P 6 HOH A 80 599 80 HOH HOH . P 6 HOH A 81 600 81 HOH HOH . P 6 HOH A 82 605 82 HOH HOH . P 6 HOH A 83 606 83 HOH HOH . P 6 HOH A 84 607 84 HOH HOH . P 6 HOH A 85 608 85 HOH HOH . P 6 HOH A 86 609 86 HOH HOH . P 6 HOH A 87 610 87 HOH HOH . P 6 HOH A 88 611 88 HOH HOH . P 6 HOH A 89 612 89 HOH HOH . P 6 HOH A 90 613 90 HOH HOH . P 6 HOH A 91 614 91 HOH HOH . P 6 HOH A 92 615 93 HOH HOH . P 6 HOH A 93 616 94 HOH HOH . P 6 HOH A 94 617 95 HOH HOH . P 6 HOH A 95 618 96 HOH HOH . P 6 HOH A 96 619 97 HOH HOH . P 6 HOH A 97 620 98 HOH HOH . P 6 HOH A 98 621 99 HOH HOH . P 6 HOH A 99 622 100 HOH HOH . P 6 HOH A 100 623 101 HOH HOH . P 6 HOH A 101 624 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . D 2 -16.985 21.788 -15.187 1 42.57 ? N TRP 603 A 1 HETATM 2 C CA TRP . . . D 2 -17.3 22.016 -13.78 1 40.39 ? CA TRP 603 A 1 HETATM 3 C C TRP . . . D 2 -18.032 20.829 -13.142 1 44.62 ? C TRP 603 A 1 HETATM 4 O O TRP . . . D 2 -18.12 20.722 -11.92 1 43.07 ? O TRP 603 A 1 HETATM 5 C CB TRP . . . D 2 -18.123 23.304 -13.619 1 43.62 ? CB TRP 603 A 1 HETATM 6 C CG TRP . . . D 2 -19.387 23.348 -14.459 1 41.54 ? CG TRP 603 A 1 HETATM 7 C CD1 TRP . . . D 2 -19.535 23.922 -15.686 1 49.16 ? CD1 TRP 603 A 1 HETATM 8 C CD2 TRP . . . D 2 -20.672 22.81 -14.11 1 43.48 ? CD2 TRP 603 A 1 HETATM 9 N NE1 TRP . . . D 2 -20.831 23.767 -16.132 1 49.35 ? NE1 TRP 603 A 1 HETATM 10 C CE2 TRP . . . D 2 -21.547 23.087 -15.181 1 44.98 ? CE2 TRP 603 A 1 HETATM 11 C CE3 TRP . . . D 2 -21.162 22.113 -12.998 1 40.6 ? CE3 TRP 603 A 1 HETATM 12 C CZ2 TRP . . . D 2 -22.883 22.699 -15.172 1 37.89 ? CZ2 TRP 603 A 1 HETATM 13 C CZ3 TRP . . . D 2 -22.485 21.729 -12.992 1 47.17 ? CZ3 TRP 603 A 1 HETATM 14 C CH2 TRP . . . D 2 -23.334 22.025 -14.073 1 39.29 ? CH2 TRP 603 A 1 HETATM 15 O OXT TRP . . . D 2 -18.561 19.949 -13.82 1 37.11 ? OXT TRP 603 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #