data_3F3D # _model_server_result.job_id YbChMAysCpJZO8B7tp2muw _model_server_result.datetime_utc '2024-11-22 12:04:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f3d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":752}' # _entry.id 3F3D # _exptl.entry_id 3F3D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.57 _cell.angle_gamma 90 _cell.entry_id 3F3D _cell.length_a 88.333 _cell.length_b 86.636 _cell.length_c 81.166 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F3D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1,2 A,B,C,D,E,F,G,H,I,J 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 80.454883 0 80.782763 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3F3D _atom_sites.fract_transf_matrix[1][1] 0.011321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001103 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011543 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 701 701 BOG BOG . C 2 BOG A 1 702 702 BOG BOG . D 2 BOG A 1 703 703 BOG BOG . E 2 BOG A 1 704 704 BOG BOG . F 2 BOG A 1 705 705 BOG BOG . G 3 NA A 1 751 751 NA NA . H 3 NA A 1 752 752 NA NA . I 4 MET A 1 601 601 MET MET . J 5 HOH A 1 801 801 HOH HOH . J 5 HOH A 2 802 802 HOH HOH . J 5 HOH A 3 803 803 HOH HOH . J 5 HOH A 4 804 804 HOH HOH . J 5 HOH A 5 805 805 HOH HOH . J 5 HOH A 6 806 806 HOH HOH . J 5 HOH A 7 807 807 HOH HOH . J 5 HOH A 8 808 808 HOH HOH . J 5 HOH A 9 809 809 HOH HOH . J 5 HOH A 10 810 810 HOH HOH . J 5 HOH A 11 811 811 HOH HOH . J 5 HOH A 12 812 812 HOH HOH . J 5 HOH A 13 813 813 HOH HOH . J 5 HOH A 14 814 814 HOH HOH . J 5 HOH A 15 815 815 HOH HOH . J 5 HOH A 16 816 816 HOH HOH . J 5 HOH A 17 817 817 HOH HOH . J 5 HOH A 18 818 818 HOH HOH . J 5 HOH A 19 819 819 HOH HOH . J 5 HOH A 20 820 820 HOH HOH . J 5 HOH A 21 821 821 HOH HOH . J 5 HOH A 22 822 822 HOH HOH . J 5 HOH A 23 823 823 HOH HOH . J 5 HOH A 24 824 824 HOH HOH . J 5 HOH A 25 825 825 HOH HOH . J 5 HOH A 26 826 826 HOH HOH . J 5 HOH A 27 827 827 HOH HOH . J 5 HOH A 28 828 828 HOH HOH . J 5 HOH A 29 829 829 HOH HOH . J 5 HOH A 30 830 830 HOH HOH . J 5 HOH A 31 831 831 HOH HOH . J 5 HOH A 32 832 832 HOH HOH . J 5 HOH A 33 833 833 HOH HOH . J 5 HOH A 34 834 834 HOH HOH . J 5 HOH A 35 835 835 HOH HOH . J 5 HOH A 36 836 836 HOH HOH . J 5 HOH A 37 837 837 HOH HOH . J 5 HOH A 38 838 838 HOH HOH . J 5 HOH A 39 839 839 HOH HOH . J 5 HOH A 40 840 840 HOH HOH . J 5 HOH A 41 841 841 HOH HOH . J 5 HOH A 42 842 842 HOH HOH . J 5 HOH A 43 843 843 HOH HOH . J 5 HOH A 44 844 844 HOH HOH . J 5 HOH A 45 845 845 HOH HOH . J 5 HOH A 46 846 846 HOH HOH . J 5 HOH A 47 847 847 HOH HOH . J 5 HOH A 48 848 848 HOH HOH . J 5 HOH A 49 849 849 HOH HOH . J 5 HOH A 50 850 850 HOH HOH . J 5 HOH A 51 851 851 HOH HOH . J 5 HOH A 52 852 852 HOH HOH . J 5 HOH A 53 853 853 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.143 _atom_site.Cartn_y 30.914 _atom_site.Cartn_z 16.004 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 752 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #