data_3F3T # _model_server_result.job_id VPc81KEOksMb1f0hl716cA _model_server_result.datetime_utc '2024-11-25 10:49:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f3t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":534}' # _entry.id 3F3T # _exptl.entry_id 3F3T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.488 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 78.71 _cell.angle_beta 89.71 _cell.angle_gamma 89.91 _cell.entry_id 3F3T _cell.length_a 42.01 _cell.length_b 63.49 _cell.length_c 74.99 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F3T _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C24 H25 N5 O' _chem_comp.formula_weight 399.488 _chem_comp.id 1AU _chem_comp.mon_nstd_flag . _chem_comp.name 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-[2-(3-Amino-phenyl)-5-tert-butyl-2H-pyrazol-3-yl]-3-naphthalen-1-yl-urea # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAX CBB 1AU doub 1 n y CBA CBB 1AU sing 2 n y CBB CAO 1AU sing 3 n y CAO CAG 1AU doub 4 n y CAO HAO 1AU sing 5 n n CAF CAG 1AU sing 6 n y CAG HAG 1AU sing 7 n n CAM CAF 1AU doub 8 n y CAF HAF 1AU sing 9 n n CBA CAM 1AU sing 10 n y CAM HAM 1AU sing 11 n n CAN CBA 1AU doub 12 n y CAI CAN 1AU sing 13 n y CAN HAN 1AU sing 14 n n CAI CAL 1AU doub 15 n y CAI HAI 1AU sing 16 n n CAL CAX 1AU sing 17 n y CAL HAL 1AU sing 18 n n CAX NAS 1AU sing 19 n n CAU NAS 1AU sing 20 n n NAS HNAS 1AU sing 21 n n OAE CAU 1AU doub 22 n n CAU NAT 1AU sing 23 n n CAZ NAT 1AU sing 24 n n NAT HNAT 1AU sing 25 n n CAQ CAZ 1AU doub 26 n y CAZ NBC 1AU sing 27 n y CAQ CAY 1AU sing 28 n y CAQ HAQ 1AU sing 29 n n CBD CAY 1AU sing 30 n n CAY NAR 1AU doub 31 n y CAC CBD 1AU sing 32 n n CAB CBD 1AU sing 33 n n CBD CAA 1AU sing 34 n n CAB HAB 1AU sing 35 n n CAB HABA 1AU sing 36 n n CAB HABB 1AU sing 37 n n CAC HAC 1AU sing 38 n n CAC HACA 1AU sing 39 n n CAC HACB 1AU sing 40 n n CAA HAA 1AU sing 41 n n CAA HAAA 1AU sing 42 n n CAA HAAB 1AU sing 43 n n NAR NBC 1AU sing 44 n y NBC CAW 1AU sing 45 n y CAW CAK 1AU doub 46 n y CAW CAP 1AU sing 47 n y CAP CAV 1AU doub 48 n y CAP HAP 1AU sing 49 n n CAK CAH 1AU sing 50 n y CAK HAK 1AU sing 51 n n CAH CAJ 1AU doub 52 n y CAH HAH 1AU sing 53 n n CAV CAJ 1AU sing 54 n y CAJ HAJ 1AU sing 55 n n CAV NAD 1AU sing 56 n n NAD HNAD 1AU sing 57 n n NAD HNAA 1AU sing 58 n n # _atom_sites.entry_id 3F3T _atom_sites.fract_transf_matrix[1][1] 0.023804 _atom_sites.fract_transf_matrix[1][2] -0.000037 _atom_sites.fract_transf_matrix[1][3] -0.000115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015751 _atom_sites.fract_transf_matrix[2][3] -0.003144 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013598 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1AU A 1 1 1 1AU DRG . D 2 1AU A 1 534 1 1AU DRG . E 3 HOH A 1 2 2 HOH HOH . E 3 HOH A 2 3 3 HOH HOH . E 3 HOH A 3 4 4 HOH HOH . E 3 HOH A 4 7 7 HOH HOH . E 3 HOH A 5 8 8 HOH HOH . E 3 HOH A 6 9 9 HOH HOH . E 3 HOH A 7 10 10 HOH HOH . E 3 HOH A 8 11 11 HOH HOH . E 3 HOH A 9 14 14 HOH HOH . E 3 HOH A 10 16 16 HOH HOH . E 3 HOH A 11 22 22 HOH HOH . E 3 HOH A 12 23 23 HOH HOH . E 3 HOH A 13 25 25 HOH HOH . E 3 HOH A 14 27 27 HOH HOH . E 3 HOH A 15 28 28 HOH HOH . E 3 HOH A 16 30 30 HOH HOH . E 3 HOH A 17 33 33 HOH HOH . E 3 HOH A 18 34 34 HOH HOH . E 3 HOH A 19 37 37 HOH HOH . E 3 HOH A 20 38 38 HOH HOH . E 3 HOH A 21 39 39 HOH HOH . E 3 HOH A 22 55 55 HOH HOH . E 3 HOH A 23 58 58 HOH HOH . E 3 HOH A 24 62 62 HOH HOH . E 3 HOH A 25 63 63 HOH HOH . E 3 HOH A 26 64 64 HOH HOH . E 3 HOH A 27 65 65 HOH HOH . E 3 HOH A 28 66 66 HOH HOH . E 3 HOH A 29 67 67 HOH HOH . E 3 HOH A 30 76 76 HOH HOH . E 3 HOH A 31 77 77 HOH HOH . E 3 HOH A 32 79 79 HOH HOH . E 3 HOH A 33 80 80 HOH HOH . E 3 HOH A 34 85 85 HOH HOH . E 3 HOH A 35 89 89 HOH HOH . E 3 HOH A 36 90 90 HOH HOH . E 3 HOH A 37 91 91 HOH HOH . E 3 HOH A 38 92 92 HOH HOH . E 3 HOH A 39 94 94 HOH HOH . E 3 HOH A 40 95 95 HOH HOH . E 3 HOH A 41 96 96 HOH HOH . E 3 HOH A 42 97 97 HOH HOH . E 3 HOH A 43 99 99 HOH HOH . E 3 HOH A 44 114 114 HOH HOH . E 3 HOH A 45 116 116 HOH HOH . E 3 HOH A 46 118 118 HOH HOH . E 3 HOH A 47 119 119 HOH HOH . E 3 HOH A 48 120 120 HOH HOH . E 3 HOH A 49 121 121 HOH HOH . E 3 HOH A 50 122 122 HOH HOH . E 3 HOH A 51 128 128 HOH HOH . E 3 HOH A 52 129 129 HOH HOH . E 3 HOH A 53 132 132 HOH HOH . E 3 HOH A 54 133 133 HOH HOH . E 3 HOH A 55 134 134 HOH HOH . F 3 HOH B 1 15 15 HOH HOH . F 3 HOH B 2 18 18 HOH HOH . F 3 HOH B 3 19 19 HOH HOH . F 3 HOH B 4 20 20 HOH HOH . F 3 HOH B 5 21 21 HOH HOH . F 3 HOH B 6 26 26 HOH HOH . F 3 HOH B 7 32 32 HOH HOH . F 3 HOH B 8 44 44 HOH HOH . F 3 HOH B 9 45 45 HOH HOH . F 3 HOH B 10 46 46 HOH HOH . F 3 HOH B 11 47 47 HOH HOH . F 3 HOH B 12 48 48 HOH HOH . F 3 HOH B 13 49 49 HOH HOH . F 3 HOH B 14 50 50 HOH HOH . F 3 HOH B 15 51 51 HOH HOH . F 3 HOH B 16 53 53 HOH HOH . F 3 HOH B 17 60 60 HOH HOH . F 3 HOH B 18 61 61 HOH HOH . F 3 HOH B 19 69 69 HOH HOH . F 3 HOH B 20 70 70 HOH HOH . F 3 HOH B 21 71 71 HOH HOH . F 3 HOH B 22 73 73 HOH HOH . F 3 HOH B 23 74 74 HOH HOH . F 3 HOH B 24 75 75 HOH HOH . F 3 HOH B 25 100 100 HOH HOH . F 3 HOH B 26 101 101 HOH HOH . F 3 HOH B 27 102 102 HOH HOH . F 3 HOH B 28 104 104 HOH HOH . F 3 HOH B 29 105 105 HOH HOH . F 3 HOH B 30 106 106 HOH HOH . F 3 HOH B 31 108 108 HOH HOH . F 3 HOH B 32 109 109 HOH HOH . F 3 HOH B 33 111 111 HOH HOH . F 3 HOH B 34 112 112 HOH HOH . F 3 HOH B 35 115 115 HOH HOH . F 3 HOH B 36 117 117 HOH HOH . F 3 HOH B 37 123 123 HOH HOH . F 3 HOH B 38 124 124 HOH HOH . F 3 HOH B 39 125 125 HOH HOH . F 3 HOH B 40 126 126 HOH HOH . F 3 HOH B 41 127 127 HOH HOH . F 3 HOH B 42 130 130 HOH HOH . F 3 HOH B 43 131 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBB 1AU . . . D 2 -11.955 39.461 -3.958 1 27.64 ? CBB 1AU 534 A 1 HETATM 2 C CAO 1AU . . . D 2 -12.454 40.485 -3.145 1 27.06 ? CAO 1AU 534 A 1 HETATM 3 C CAG 1AU . . . D 2 -13.79 40.498 -2.721 1 27.15 ? CAG 1AU 534 A 1 HETATM 4 C CAF 1AU . . . D 2 -14.646 39.47 -3.111 1 27.64 ? CAF 1AU 534 A 1 HETATM 5 C CAM 1AU . . . D 2 -14.157 38.437 -3.922 1 27.68 ? CAM 1AU 534 A 1 HETATM 6 C CBA 1AU . . . D 2 -12.823 38.428 -4.345 1 27.16 ? CBA 1AU 534 A 1 HETATM 7 C CAN 1AU . . . D 2 -12.365 37.395 -5.152 1 26.54 ? CAN 1AU 534 A 1 HETATM 8 C CAI 1AU . . . D 2 -11.044 37.389 -5.581 1 27.02 ? CAI 1AU 534 A 1 HETATM 9 C CAL 1AU . . . D 2 -10.174 38.413 -5.202 1 26.93 ? CAL 1AU 534 A 1 HETATM 10 C CAX 1AU . . . D 2 -10.617 39.467 -4.401 1 28.08 ? CAX 1AU 534 A 1 HETATM 11 N NAS 1AU . . . D 2 -9.78 40.452 -4.015 1 28.15 ? NAS 1AU 534 A 1 HETATM 12 C CAU 1AU . . . D 2 -8.531 40.702 -4.463 1 28.9 ? CAU 1AU 534 A 1 HETATM 13 O OAE 1AU . . . D 2 -7.97 40.051 -5.355 1 27.61 ? OAE 1AU 534 A 1 HETATM 14 N NAT 1AU . . . D 2 -7.93 41.751 -3.897 1 28.24 ? NAT 1AU 534 A 1 HETATM 15 C CAZ 1AU . . . D 2 -6.656 42.079 -4.228 1 29.59 ? CAZ 1AU 534 A 1 HETATM 16 C CAQ 1AU . . . D 2 -6.059 42.2 -5.427 1 28.79 ? CAQ 1AU 534 A 1 HETATM 17 C CAY 1AU . . . D 2 -4.78 42.492 -5.134 1 28.25 ? CAY 1AU 534 A 1 HETATM 18 C CBD 1AU . . . D 2 -3.584 42.753 -6.116 1 27.91 ? CBD 1AU 534 A 1 HETATM 19 C CAB 1AU . . . D 2 -2.891 41.416 -6.444 1 25.93 ? CAB 1AU 534 A 1 HETATM 20 C CAC 1AU . . . D 2 -4.033 43.443 -7.421 1 26.99 ? CAC 1AU 534 A 1 HETATM 21 C CAA 1AU . . . D 2 -2.565 43.661 -5.42 1 27.42 ? CAA 1AU 534 A 1 HETATM 22 N NAR 1AU . . . D 2 -4.643 42.521 -3.809 1 29.13 ? NAR 1AU 534 A 1 HETATM 23 N NBC 1AU . . . D 2 -5.731 42.264 -3.284 1 28.36 ? NBC 1AU 534 A 1 HETATM 24 C CAW 1AU . . . D 2 -5.965 42.221 -1.965 1 27.1 ? CAW 1AU 534 A 1 HETATM 25 C CAP 1AU . . . D 2 -5.76 41.063 -1.188 1 26.87 ? CAP 1AU 534 A 1 HETATM 26 C CAK 1AU . . . D 2 -6.436 43.387 -1.37 1 26.36 ? CAK 1AU 534 A 1 HETATM 27 C CAH 1AU . . . D 2 -6.706 43.416 0 1 27.09 ? CAH 1AU 534 A 1 HETATM 28 C CAJ 1AU . . . D 2 -6.497 42.279 0.781 1 27.33 ? CAJ 1AU 534 A 1 HETATM 29 C CAV 1AU . . . D 2 -6.024 41.091 0.208 1 28.32 ? CAV 1AU 534 A 1 HETATM 30 N NAD 1AU . . . D 2 -5.838 40.022 1.024 1 26.31 ? NAD 1AU 534 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #