data_3F48
#
_model_server_result.job_id            HYX4e6cOK-2HZF4i0KmeWg 
_model_server_result.datetime_utc      '2024-10-12 05:19:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3f48 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    3F48 
#
_exptl.entry_id    3F48 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.9 
_cell.angle_gamma         90 
_cell.entry_id            3F48 
_cell.length_a            89.4 
_cell.length_b            87.2 
_cell.length_c            81.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3F48 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K 1 1,2 
A,B,C,D,E,F,G,H,I,J,K 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 81.053246 0 80.769869 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 70 n n 
C1 C2 BOG sing 71 n n 
C1 O5 BOG sing 72 n n 
C1 H1 BOG sing 73 n n 
O1 C1' BOG sing 74 n n 
C2 O2 BOG sing 75 n n 
C2 C3 BOG sing 76 n n 
C2 H2 BOG sing 77 n n 
O2 HO2 BOG sing 78 n n 
C3 O3 BOG sing 79 n n 
C3 C4 BOG sing 80 n n 
C3 H3 BOG sing 81 n n 
O3 HO3 BOG sing 82 n n 
C4 O4 BOG sing 83 n n 
C4 C5 BOG sing 84 n n 
C4 H4 BOG sing 85 n n 
O4 HO4 BOG sing 86 n n 
C5 O5 BOG sing 87 n n 
C5 C6 BOG sing 88 n n 
C5 H5 BOG sing 89 n n 
C6 O6 BOG sing 90 n n 
C6 H61 BOG sing 91 n n 
C6 H62 BOG sing 92 n n 
O6 HO6 BOG sing 93 n n 
C1' C2' BOG sing 94 n n 
C1' "H1'1" BOG sing 95 n n 
C1' "H1'2" BOG sing 96 n n 
C2' C3' BOG sing 97 n n 
C2' "H2'1" BOG sing 98 n n 
C2' "H2'2" BOG sing 99 n n 
C3' C4' BOG sing 100 n n 
C3' "H3'1" BOG sing 101 n n 
C3' "H3'2" BOG sing 102 n n 
C4' C5' BOG sing 103 n n 
C4' "H4'1" BOG sing 104 n n 
C4' "H4'2" BOG sing 105 n n 
C5' C6' BOG sing 106 n n 
C5' "H5'1" BOG sing 107 n n 
C5' "H5'2" BOG sing 108 n n 
C6' C7' BOG sing 109 n n 
C6' "H6'1" BOG sing 110 n n 
C6' "H6'2" BOG sing 111 n n 
C7' C8' BOG sing 112 n n 
C7' "H7'1" BOG sing 113 n n 
C7' "H7'2" BOG sing 114 n n 
C8' "H8'1" BOG sing 115 n n 
C8' "H8'2" BOG sing 116 n n 
C8' "H8'3" BOG sing 117 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     3F48 
_atom_sites.fract_transf_matrix[1][1]    0.011186 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001156 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011468 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012381 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BOG A 1 701 701 BOG BOG . 
C 2 BOG A 1 702 702 BOG BOG . 
D 2 BOG A 1 703 703 BOG BOG . 
E 2 BOG A 1 704 704 BOG BOG . 
F 2 BOG A 1 705 705 BOG BOG . 
G 2 BOG A 1 706 706 BOG BOG . 
H 3 NA A 1 751 751 NA NA . 
I 3 NA A 1 752 752 NA NA . 
J 4 ALA A 1 601 601 ALA ALA . 
K 5 HOH A 1 801 801 HOH HOH . 
K 5 HOH A 2 802 802 HOH HOH . 
K 5 HOH A 3 803 803 HOH HOH . 
K 5 HOH A 4 804 804 HOH HOH . 
K 5 HOH A 5 805 805 HOH HOH . 
K 5 HOH A 6 806 806 HOH HOH . 
K 5 HOH A 7 807 807 HOH HOH . 
K 5 HOH A 8 808 808 HOH HOH . 
K 5 HOH A 9 809 809 HOH HOH . 
K 5 HOH A 10 810 810 HOH HOH . 
K 5 HOH A 11 811 811 HOH HOH . 
K 5 HOH A 12 812 812 HOH HOH . 
K 5 HOH A 13 813 813 HOH HOH . 
K 5 HOH A 14 814 814 HOH HOH . 
K 5 HOH A 15 815 815 HOH HOH . 
K 5 HOH A 16 816 816 HOH HOH . 
K 5 HOH A 17 817 817 HOH HOH . 
K 5 HOH A 18 818 818 HOH HOH . 
K 5 HOH A 19 819 819 HOH HOH . 
K 5 HOH A 20 820 820 HOH HOH . 
K 5 HOH A 21 821 821 HOH HOH . 
K 5 HOH A 22 822 822 HOH HOH . 
K 5 HOH A 23 823 823 HOH HOH . 
K 5 HOH A 24 824 824 HOH HOH . 
K 5 HOH A 25 825 825 HOH HOH . 
K 5 HOH A 26 826 826 HOH HOH . 
K 5 HOH A 27 827 827 HOH HOH . 
K 5 HOH A 28 828 828 HOH HOH . 
K 5 HOH A 29 829 829 HOH HOH . 
K 5 HOH A 30 830 830 HOH HOH . 
K 5 HOH A 31 831 831 HOH HOH . 
K 5 HOH A 32 832 832 HOH HOH . 
K 5 HOH A 33 833 833 HOH HOH . 
K 5 HOH A 34 834 834 HOH HOH . 
K 5 HOH A 35 835 835 HOH HOH . 
K 5 HOH A 36 836 836 HOH HOH . 
K 5 HOH A 37 837 837 HOH HOH . 
K 5 HOH A 38 838 838 HOH HOH . 
K 5 HOH A 39 839 839 HOH HOH . 
K 5 HOH A 40 840 840 HOH HOH . 
K 5 HOH A 41 841 841 HOH HOH . 
K 5 HOH A 42 842 842 HOH HOH . 
K 5 HOH A 43 843 843 HOH HOH . 
K 5 HOH A 44 844 844 HOH HOH . 
K 5 HOH A 45 845 845 HOH HOH . 
K 5 HOH A 46 846 846 HOH HOH . 
K 5 HOH A 47 847 847 HOH HOH . 
K 5 HOH A 48 848 848 HOH HOH . 
K 5 HOH A 49 849 849 HOH HOH . 
K 5 HOH A 50 850 850 HOH HOH . 
K 5 HOH A 51 851 851 HOH HOH . 
K 5 HOH A 52 852 852 HOH HOH . 
K 5 HOH A 53 853 853 HOH HOH . 
K 5 HOH A 54 854 854 HOH HOH . 
K 5 HOH A 55 855 855 HOH HOH . 
K 5 HOH A 56 856 856 HOH HOH . 
K 5 HOH A 57 857 857 HOH HOH . 
K 5 HOH A 58 858 858 HOH HOH . 
K 5 HOH A 59 859 859 HOH HOH . 
K 5 HOH A 60 860 860 HOH HOH . 
K 5 HOH A 61 861 861 HOH HOH . 
K 5 HOH A 62 862 862 HOH HOH . 
K 5 HOH A 63 863 863 HOH HOH . 
K 5 HOH A 64 864 864 HOH HOH . 
K 5 HOH A 65 865 865 HOH HOH . 
K 5 HOH A 66 866 866 HOH HOH . 
K 5 HOH A 67 867 867 HOH HOH . 
K 5 HOH A 68 868 868 HOH HOH . 
K 5 HOH A 69 869 869 HOH HOH . 
K 5 HOH A 70 870 870 HOH HOH . 
K 5 HOH A 71 871 871 HOH HOH . 
K 5 HOH A 72 872 872 HOH HOH . 
K 5 HOH A 73 873 873 HOH HOH . 
K 5 HOH A 74 874 874 HOH HOH . 
K 5 HOH A 75 875 875 HOH HOH . 
K 5 HOH A 76 876 876 HOH HOH . 
K 5 HOH A 77 877 877 HOH HOH . 
K 5 HOH A 78 878 878 HOH HOH . 
K 5 HOH A 79 879 879 HOH HOH . 
K 5 HOH A 80 880 880 HOH HOH . 
K 5 HOH A 81 881 881 HOH HOH . 
K 5 HOH A 82 882 882 HOH HOH . 
K 5 HOH A 83 883 883 HOH HOH . 
K 5 HOH A 84 884 884 HOH HOH . 
K 5 HOH A 85 885 885 HOH HOH . 
K 5 HOH A 86 886 886 HOH HOH . 
K 5 HOH A 87 887 887 HOH HOH . 
K 5 HOH A 88 888 888 HOH HOH . 
K 5 HOH A 89 889 889 HOH HOH . 
K 5 HOH A 90 890 890 HOH HOH . 
K 5 HOH A 91 891 891 HOH HOH . 
K 5 HOH A 92 892 892 HOH HOH . 
K 5 HOH A 93 893 893 HOH HOH . 
K 5 HOH A 94 894 894 HOH HOH . 
K 5 HOH A 95 895 895 HOH HOH . 
K 5 HOH A 96 896 896 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . B 2 -0.055 42.646 12.462 1 71.38 ? C1 BOG 701 A 1 
HETATM 2 O O1 BOG . . . B 2 0.311 41.345 12.928 1 71.97 ? O1 BOG 701 A 1 
HETATM 3 C C2 BOG . . . B 2 -1.609 42.757 12.4 1 71.13 ? C2 BOG 701 A 1 
HETATM 4 O O2 BOG . . . B 2 -2.123 41.748 11.534 1 71.41 ? O2 BOG 701 A 1 
HETATM 5 C C3 BOG . . . B 2 -2.006 44.177 11.901 1 70.76 ? C3 BOG 701 A 1 
HETATM 6 O O3 BOG . . . B 2 -3.422 44.298 11.837 1 71.21 ? O3 BOG 701 A 1 
HETATM 7 C C4 BOG . . . B 2 -1.426 45.228 12.876 1 70.63 ? C4 BOG 701 A 1 
HETATM 8 O O4 BOG . . . B 2 -1.78 46.55 12.453 1 70.23 ? O4 BOG 701 A 1 
HETATM 9 C C5 BOG . . . B 2 0.139 45.08 12.942 1 70.11 ? C5 BOG 701 A 1 
HETATM 10 O O5 BOG . . . B 2 0.474 43.711 13.361 1 70.8 ? O5 BOG 701 A 1 
HETATM 11 C C6 BOG . . . B 2 0.746 46.099 13.929 1 68.88 ? C6 BOG 701 A 1 
HETATM 12 O O6 BOG . . . B 2 0.335 45.854 15.281 1 66.62 ? O6 BOG 701 A 1 
HETATM 13 C C1' BOG . . . B 2 1.722 41.152 13.004 1 72.29 ? C1' BOG 701 A 1 
HETATM 14 C C2' BOG . . . B 2 2.005 39.677 13.093 1 71.69 ? C2' BOG 701 A 1 
HETATM 15 C C3' BOG . . . B 2 2.636 39.394 14.428 1 72.1 ? C3' BOG 701 A 1 
HETATM 16 C C4' BOG . . . B 2 2.96 37.929 14.622 1 72.15 ? C4' BOG 701 A 1 
HETATM 17 C C5' BOG . . . B 2 3.593 37.709 15.986 1 72.91 ? C5' BOG 701 A 1 
HETATM 18 C C6' BOG . . . B 2 2.847 36.646 16.767 1 73.56 ? C6' BOG 701 A 1 
HETATM 19 C C7' BOG . . . B 2 3.458 36.417 18.119 1 73.41 ? C7' BOG 701 A 1 
HETATM 20 C C8' BOG . . . B 2 2.685 35.353 18.86 1 74.14 ? C8' BOG 701 A 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           20 
#