data_3F4T # _model_server_result.job_id O1E2Q13bi8VwwhGv6Z2G-Q _model_server_result.datetime_utc '2024-11-12 20:38:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f4t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":227}' # _entry.id 3F4T # _exptl.entry_id 3F4T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106 _cell.angle_gamma 90 _cell.entry_id 3F4T _cell.length_a 71 _cell.length_b 49.5 _cell.length_c 69.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F4T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 51 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 51 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 54 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 54 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id B _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.03 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 274 n n C1 C2 PGE sing 275 n n C1 H1 PGE sing 276 n n C1 H12 PGE sing 277 n n O1 HO1 PGE sing 278 n n C2 O2 PGE sing 279 n n C2 H2 PGE sing 280 n n C2 H22 PGE sing 281 n n O2 C3 PGE sing 282 n n C3 C4 PGE sing 283 n n C3 H3 PGE sing 284 n n C3 H32 PGE sing 285 n n C4 O3 PGE sing 286 n n C4 H4 PGE sing 287 n n C4 H42 PGE sing 288 n n O4 C6 PGE sing 289 n n O4 HO4 PGE sing 290 n n C6 C5 PGE sing 291 n n C6 H6 PGE sing 292 n n C6 H62 PGE sing 293 n n C5 O3 PGE sing 294 n n C5 H5 PGE sing 295 n n C5 H52 PGE sing 296 n n # _atom_sites.entry_id 3F4T _atom_sites.fract_transf_matrix[1][1] 0.014085 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004039 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020202 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 227 1 PGE PGE . C 3 1PE A 1 228 1 1PE 1PE . D 4 HOH A 1 1001 1001 HOH HOH . D 4 HOH A 2 1002 1002 HOH HOH . D 4 HOH A 3 1003 1003 HOH HOH . D 4 HOH A 4 1004 1004 HOH HOH . D 4 HOH A 5 1005 1005 HOH HOH . D 4 HOH A 6 1007 1007 HOH HOH . D 4 HOH A 7 1010 1010 HOH HOH . D 4 HOH A 8 1011 1011 HOH HOH . D 4 HOH A 9 1012 1012 HOH HOH . D 4 HOH A 10 1013 1013 HOH HOH . D 4 HOH A 11 1017 1017 HOH HOH . D 4 HOH A 12 1021 1021 HOH HOH . D 4 HOH A 13 1022 1022 HOH HOH . D 4 HOH A 14 1023 1023 HOH HOH . D 4 HOH A 15 1025 1025 HOH HOH . D 4 HOH A 16 1026 1026 HOH HOH . D 4 HOH A 17 1028 1028 HOH HOH . D 4 HOH A 18 1029 1029 HOH HOH . D 4 HOH A 19 1031 1031 HOH HOH . D 4 HOH A 20 1033 1033 HOH HOH . D 4 HOH A 21 1035 1035 HOH HOH . D 4 HOH A 22 1036 1036 HOH HOH . D 4 HOH A 23 1038 1038 HOH HOH . D 4 HOH A 24 1039 1039 HOH HOH . D 4 HOH A 25 1045 1045 HOH HOH . D 4 HOH A 26 1047 1047 HOH HOH . D 4 HOH A 27 1048 1048 HOH HOH . D 4 HOH A 28 1055 1055 HOH HOH . D 4 HOH A 29 1057 1057 HOH HOH . D 4 HOH A 30 1059 1059 HOH HOH . D 4 HOH A 31 1060 1060 HOH HOH . D 4 HOH A 32 1064 1064 HOH HOH . D 4 HOH A 33 1065 1065 HOH HOH . D 4 HOH A 34 1070 1070 HOH HOH . D 4 HOH A 35 1072 1072 HOH HOH . D 4 HOH A 36 1073 1073 HOH HOH . D 4 HOH A 37 1075 1075 HOH HOH . D 4 HOH A 38 1077 1077 HOH HOH . D 4 HOH A 39 1078 1078 HOH HOH . D 4 HOH A 40 1079 1079 HOH HOH . D 4 HOH A 41 1080 1080 HOH HOH . D 4 HOH A 42 1081 1081 HOH HOH . D 4 HOH A 43 1082 1082 HOH HOH . D 4 HOH A 44 1087 1087 HOH HOH . D 4 HOH A 45 1088 1088 HOH HOH . D 4 HOH A 46 1089 1089 HOH HOH . D 4 HOH A 47 1090 1090 HOH HOH . D 4 HOH A 48 1091 1091 HOH HOH . D 4 HOH A 49 1093 1093 HOH HOH . D 4 HOH A 50 1095 1095 HOH HOH . D 4 HOH A 51 1096 1096 HOH HOH . D 4 HOH A 52 1097 1097 HOH HOH . D 4 HOH A 53 1098 1098 HOH HOH . D 4 HOH A 54 1099 1099 HOH HOH . D 4 HOH A 55 1101 1101 HOH HOH . D 4 HOH A 56 1102 1102 HOH HOH . D 4 HOH A 57 1103 1103 HOH HOH . D 4 HOH A 58 1110 1110 HOH HOH . D 4 HOH A 59 1111 1111 HOH HOH . D 4 HOH A 60 1116 1116 HOH HOH . D 4 HOH A 61 1124 1124 HOH HOH . D 4 HOH A 62 1126 1126 HOH HOH . D 4 HOH A 63 1127 1127 HOH HOH . D 4 HOH A 64 1130 1130 HOH HOH . D 4 HOH A 65 1133 1133 HOH HOH . D 4 HOH A 66 1134 1134 HOH HOH . D 4 HOH A 67 1135 1135 HOH HOH . D 4 HOH A 68 1136 1136 HOH HOH . D 4 HOH A 69 1137 1137 HOH HOH . D 4 HOH A 70 1138 1138 HOH HOH . D 4 HOH A 71 1139 1139 HOH HOH . D 4 HOH A 72 1140 1140 HOH HOH . D 4 HOH A 73 1141 1141 HOH HOH . D 4 HOH A 74 1142 1142 HOH HOH . D 4 HOH A 75 1143 1143 HOH HOH . D 4 HOH A 76 1144 1144 HOH HOH . D 4 HOH A 77 1145 1145 HOH HOH . D 4 HOH A 78 1147 1147 HOH HOH . D 4 HOH A 79 1219 1219 HOH HOH . D 4 HOH A 80 1220 1220 HOH HOH . D 4 HOH A 81 1221 1221 HOH HOH . D 4 HOH A 82 1222 1222 HOH HOH . D 4 HOH A 83 1223 1223 HOH HOH . D 4 HOH A 84 1224 1224 HOH HOH . D 4 HOH A 85 1225 1225 HOH HOH . D 4 HOH A 86 1226 1226 HOH HOH . D 4 HOH A 87 1229 1229 HOH HOH . D 4 HOH A 88 1230 1230 HOH HOH . D 4 HOH A 89 1231 1231 HOH HOH . D 4 HOH A 90 1233 1233 HOH HOH . D 4 HOH A 91 1234 1234 HOH HOH . D 4 HOH A 92 1235 1235 HOH HOH . D 4 HOH A 93 1236 1236 HOH HOH . D 4 HOH A 94 1237 1237 HOH HOH . D 4 HOH A 95 1238 1238 HOH HOH . D 4 HOH A 96 1239 1239 HOH HOH . D 4 HOH A 97 1240 1240 HOH HOH . D 4 HOH A 98 1241 1241 HOH HOH . D 4 HOH A 99 1242 1242 HOH HOH . D 4 HOH A 100 1243 1243 HOH HOH . D 4 HOH A 101 1245 1245 HOH HOH . D 4 HOH A 102 1246 1246 HOH HOH . D 4 HOH A 103 1247 1247 HOH HOH . D 4 HOH A 104 1248 1248 HOH HOH . D 4 HOH A 105 1250 1250 HOH HOH . D 4 HOH A 106 1251 1251 HOH HOH . D 4 HOH A 107 1254 1254 HOH HOH . D 4 HOH A 108 1255 1255 HOH HOH . D 4 HOH A 109 1256 1256 HOH HOH . D 4 HOH A 110 1257 1257 HOH HOH . D 4 HOH A 111 1258 1258 HOH HOH . D 4 HOH A 112 1260 1260 HOH HOH . D 4 HOH A 113 1261 1261 HOH HOH . D 4 HOH A 114 1262 1262 HOH HOH . D 4 HOH A 115 1263 1263 HOH HOH . D 4 HOH A 116 1265 1265 HOH HOH . D 4 HOH A 117 1266 1266 HOH HOH . D 4 HOH A 118 1267 1267 HOH HOH . D 4 HOH A 119 1268 1268 HOH HOH . D 4 HOH A 120 1270 1270 HOH HOH . D 4 HOH A 121 1271 1271 HOH HOH . D 4 HOH A 122 1272 1272 HOH HOH . D 4 HOH A 123 1273 1273 HOH HOH . D 4 HOH A 124 1274 1274 HOH HOH . D 4 HOH A 125 1277 1277 HOH HOH . D 4 HOH A 126 1280 1280 HOH HOH . D 4 HOH A 127 1282 1282 HOH HOH . D 4 HOH A 128 1284 1284 HOH HOH . D 4 HOH A 129 1285 1285 HOH HOH . D 4 HOH A 130 1286 1286 HOH HOH . D 4 HOH A 131 1287 1287 HOH HOH . D 4 HOH A 132 1288 1288 HOH HOH . D 4 HOH A 133 1289 1289 HOH HOH . D 4 HOH A 134 1290 1290 HOH HOH . D 4 HOH A 135 1291 1291 HOH HOH . D 4 HOH A 136 1292 1292 HOH HOH . D 4 HOH A 137 1294 1294 HOH HOH . D 4 HOH A 138 1295 1295 HOH HOH . D 4 HOH A 139 1297 1297 HOH HOH . D 4 HOH A 140 1298 1298 HOH HOH . D 4 HOH A 141 1299 1299 HOH HOH . D 4 HOH A 142 1300 1300 HOH HOH . D 4 HOH A 143 1301 1301 HOH HOH . D 4 HOH A 144 1302 1302 HOH HOH . D 4 HOH A 145 1304 1304 HOH HOH . D 4 HOH A 146 1305 1305 HOH HOH . D 4 HOH A 147 1306 1306 HOH HOH . D 4 HOH A 148 1307 1307 HOH HOH . D 4 HOH A 149 1308 1308 HOH HOH . D 4 HOH A 150 1309 1309 HOH HOH . D 4 HOH A 151 1310 1310 HOH HOH . D 4 HOH A 152 1311 1311 HOH HOH . D 4 HOH A 153 1312 1312 HOH HOH . D 4 HOH A 154 1315 1315 HOH HOH . D 4 HOH A 155 1317 1317 HOH HOH . D 4 HOH A 156 1318 1318 HOH HOH . D 4 HOH A 157 1319 1319 HOH HOH . D 4 HOH A 158 1320 1320 HOH HOH . D 4 HOH A 159 1321 1321 HOH HOH . D 4 HOH A 160 1322 1322 HOH HOH . D 4 HOH A 161 1323 1323 HOH HOH . D 4 HOH A 162 1326 1326 HOH HOH . D 4 HOH A 163 1327 1327 HOH HOH . D 4 HOH A 164 1328 1328 HOH HOH . D 4 HOH A 165 1330 1330 HOH HOH . D 4 HOH A 166 1331 1331 HOH HOH . D 4 HOH A 167 1332 1332 HOH HOH . D 4 HOH A 168 1333 1333 HOH HOH . D 4 HOH A 169 1334 1334 HOH HOH . D 4 HOH A 170 1335 1335 HOH HOH . D 4 HOH A 171 1338 1338 HOH HOH . D 4 HOH A 172 1339 1339 HOH HOH . D 4 HOH A 173 1340 1340 HOH HOH . D 4 HOH A 174 1341 1341 HOH HOH . D 4 HOH A 175 1342 1342 HOH HOH . D 4 HOH A 176 1343 1343 HOH HOH . D 4 HOH A 177 1344 1344 HOH HOH . D 4 HOH A 178 1345 1345 HOH HOH . D 4 HOH A 179 1346 1346 HOH HOH . D 4 HOH A 180 1347 1347 HOH HOH . D 4 HOH A 181 1348 1348 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . B 2 -3.08 -1.664 -1.139 1 59.16 ? C1 PGE 227 A 1 HETATM 2 O O1 PGE . . . B 2 -4.194 -1.395 -0.331 1 64.79 ? O1 PGE 227 A 1 HETATM 3 C C2 PGE . . . B 2 -2.948 -0.57 -2.213 1 47.81 ? C2 PGE 227 A 1 HETATM 4 O O2 PGE . . . B 2 -2.429 0.62 -1.642 1 39.06 ? O2 PGE 227 A 1 HETATM 5 C C3 PGE . . . B 2 -2.78 1.037 -0.341 1 48.87 ? C3 PGE 227 A 1 HETATM 6 C C4 PGE . . . B 2 -1.584 0.915 0.631 1 47.31 ? C4 PGE 227 A 1 HETATM 7 O O4 PGE . . . B 2 0.545 0.659 4.055 1 25.4 ? O4 PGE 227 A 1 HETATM 8 C C6 PGE . . . B 2 -0.273 0.867 2.935 1 50.58 ? C6 PGE 227 A 1 HETATM 9 C C5 PGE . . . B 2 -1.162 -0.358 2.675 1 50.61 ? C5 PGE 227 A 1 HETATM 10 O O3 PGE . . . B 2 -1.657 -0.299 1.353 1 52.58 ? O3 PGE 227 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #