data_3F69 # _model_server_result.job_id d4pegAMfo0rnKmK-vweNtw _model_server_result.datetime_utc '2024-11-24 18:37:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3f69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":311}' # _entry.id 3F69 # _exptl.entry_id 3F69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3F69 _cell.length_a 297.557 _cell.length_b 297.557 _cell.length_c 297.557 _cell.Z_PDB 192 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3F69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C VAL 173 B VAL 170 1_555 B N TPO 174 B TPO 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C TPO 174 B TPO 171 1_555 B N GLN 175 B GLN 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3F69 _atom_sites.fract_transf_matrix[1][1] 0.003361 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003361 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XDR A 1 309 1 XDR DRG . D 3 SO4 A 1 310 1 SO4 SO4 . E 3 SO4 A 1 311 2 SO4 SO4 . F 2 XDR B 1 309 1 XDR DRG . G 3 SO4 B 1 310 1 SO4 SO4 . H 3 SO4 B 1 311 1 SO4 SO4 . I 4 HOH A 1 312 1 HOH HOH . I 4 HOH A 2 313 1 HOH HOH . I 4 HOH A 3 314 1 HOH HOH . I 4 HOH A 4 315 2 HOH HOH . I 4 HOH A 5 316 1 HOH HOH . I 4 HOH A 6 317 1 HOH HOH . I 4 HOH A 7 318 13 HOH HOH . I 4 HOH A 8 319 5 HOH HOH . I 4 HOH A 9 320 6 HOH HOH . I 4 HOH A 10 321 11 HOH HOH . I 4 HOH A 11 322 12 HOH HOH . I 4 HOH A 12 323 7 HOH HOH . I 4 HOH A 13 324 17 HOH HOH . I 4 HOH A 14 325 18 HOH HOH . I 4 HOH A 15 326 19 HOH HOH . I 4 HOH A 16 327 20 HOH HOH . I 4 HOH A 17 332 3 HOH HOH . J 4 HOH B 1 312 4 HOH HOH . J 4 HOH B 2 314 3 HOH HOH . J 4 HOH B 3 318 8 HOH HOH . J 4 HOH B 4 319 9 HOH HOH . J 4 HOH B 5 320 10 HOH HOH . J 4 HOH B 6 323 14 HOH HOH . J 4 HOH B 7 328 3 HOH HOH . J 4 HOH B 8 329 5 HOH HOH . J 4 HOH B 9 330 6 HOH HOH . J 4 HOH B 10 331 7 HOH HOH . J 4 HOH B 11 333 4 HOH HOH . J 4 HOH B 12 334 5 HOH HOH . J 4 HOH B 13 335 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 3 -29.539 -74.537 -28.214 1 72.7 ? S SO4 311 B 1 HETATM 2 O O1 SO4 . . . H 3 -28.979 -75.367 -29.277 1 72.7 ? O1 SO4 311 B 1 HETATM 3 O O2 SO4 . . . H 3 -30.998 -74.599 -28.241 1 72.93 ? O2 SO4 311 B 1 HETATM 4 O O3 SO4 . . . H 3 -29.078 -75.035 -26.919 1 73.06 ? O3 SO4 311 B 1 HETATM 5 O O4 SO4 . . . H 3 -29.103 -73.155 -28.419 1 72.79 ? O4 SO4 311 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #