data_3F6U
#
_model_server_result.job_id            utNjapdVOcqC3FpmgNQ1fQ 
_model_server_result.datetime_utc      '2025-03-04 19:15:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3f6u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":245}' 
#
_entry.id    3F6U 
#
_exptl.entry_id    3F6U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3F6U 
_cell.length_a            57.06 
_cell.length_b            89.6 
_cell.length_c            101.23 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3F6U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 27 H CYS 42 1_555 A SG CYS 43 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
disulf ? disulf2 A SG CYS 108 H CYS 122 1_555 B SG CYS 93 L CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf3 A SG CYS 162 H CYS 168 1_555 A SG CYS 176 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? 
disulf ? disulf4 A SG CYS 187 H CYS 191 1_555 A SG CYS 215 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
disulf ? disulf5 B SG CYS 2 L CYS 50 1_555 B SG CYS 21 L CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
disulf ? disulf6 B SG CYS 11 L CYS 59 1_555 B SG CYS 16 L CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf7 B SG CYS 15 L CYS 63 1_555 B SG CYS 30 L CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf8 B SG CYS 32 L CYS 80 1_555 B SG CYS 41 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
disulf ? disulf9 B SG CYS 50 L CYS 98 1_555 B SG CYS 61 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf10 B SG CYS 57 L CYS 105 1_555 B SG CYS 70 L CYS 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf11 B SG CYS 72 L CYS 120 1_555 B SG CYS 85 L CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
covale ? covale1 C C3 0G6 . H 0G6 1 1_555 A NE2 HIS 42 H HIS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
covale ? covale2 C C2 0G6 . H 0G6 1 1_555 A OG SER 191 H SER 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? 
metalc ? metalc1 A OE1 GLU 56 H GLU 70 1_555 E CA CA . H CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.952 ? 
metalc ? metalc2 A OE2 GLU 56 H GLU 70 1_555 E CA CA . H CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? 
metalc ? metalc3 A O ARG 61 H ARG 75 1_555 E CA CA . H CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? 
metalc ? metalc4 A OE1 GLU 66 H GLU 80 1_555 E CA CA . H CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc5 A OE2 GLU 66 H GLU 80 1_555 E CA CA . H CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? 
metalc ? metalc6 A O ILE 179 H ILE 184 1_555 D NA NA . H NA 245 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.582 ? 
metalc ? metalc7 A O ASP 182 H ASP 186 1_555 D NA NA . H NA 245 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.852 ? 
metalc ? metalc8 D NA NA . H NA 245 1_555 F O HOH . H HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3F6U 
_atom_sites.fract_transf_matrix[1][1]    0.017525 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011161 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009878 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 0G6 H 1 1 1 0G6 DPN . 
D 4 NA H 1 245 245 NA NA . 
E 5 CA H 1 246 246 CA CA . 
F 6 HOH H 1 4 4 HOH HOH . 
F 6 HOH H 2 6 6 HOH HOH . 
F 6 HOH H 3 7 7 HOH HOH . 
F 6 HOH H 4 8 8 HOH HOH . 
F 6 HOH H 5 9 9 HOH HOH . 
F 6 HOH H 6 10 10 HOH HOH . 
F 6 HOH H 7 11 11 HOH HOH . 
F 6 HOH H 8 12 12 HOH HOH . 
F 6 HOH H 9 13 13 HOH HOH . 
F 6 HOH H 10 247 247 HOH HOH . 
F 6 HOH H 11 248 248 HOH HOH . 
F 6 HOH H 12 249 249 HOH HOH . 
F 6 HOH H 13 250 250 HOH HOH . 
F 6 HOH H 14 251 251 HOH HOH . 
F 6 HOH H 15 252 252 HOH HOH . 
F 6 HOH H 16 253 253 HOH HOH . 
F 6 HOH H 17 254 254 HOH HOH . 
F 6 HOH H 18 255 255 HOH HOH . 
F 6 HOH H 19 256 256 HOH HOH . 
F 6 HOH H 20 257 257 HOH HOH . 
F 6 HOH H 21 258 258 HOH HOH . 
F 6 HOH H 22 259 259 HOH HOH . 
F 6 HOH H 23 260 260 HOH HOH . 
F 6 HOH H 24 261 261 HOH HOH . 
F 6 HOH H 25 262 262 HOH HOH . 
F 6 HOH H 26 263 263 HOH HOH . 
F 6 HOH H 27 264 264 HOH HOH . 
F 6 HOH H 28 265 265 HOH HOH . 
F 6 HOH H 29 266 266 HOH HOH . 
F 6 HOH H 30 267 267 HOH HOH . 
F 6 HOH H 31 268 268 HOH HOH . 
F 6 HOH H 32 269 269 HOH HOH . 
F 6 HOH H 33 270 270 HOH HOH . 
F 6 HOH H 34 271 271 HOH HOH . 
F 6 HOH H 35 272 272 HOH HOH . 
F 6 HOH H 36 273 273 HOH HOH . 
F 6 HOH H 37 274 274 HOH HOH . 
F 6 HOH H 38 275 275 HOH HOH . 
F 6 HOH H 39 276 276 HOH HOH . 
F 6 HOH H 40 277 277 HOH HOH . 
F 6 HOH H 41 278 278 HOH HOH . 
F 6 HOH H 42 279 279 HOH HOH . 
F 6 HOH H 43 280 280 HOH HOH . 
F 6 HOH H 44 281 281 HOH HOH . 
F 6 HOH H 45 282 282 HOH HOH . 
F 6 HOH H 46 283 283 HOH HOH . 
F 6 HOH H 47 284 284 HOH HOH . 
F 6 HOH H 48 285 285 HOH HOH . 
F 6 HOH H 49 286 286 HOH HOH . 
F 6 HOH H 50 287 287 HOH HOH . 
F 6 HOH H 51 288 288 HOH HOH . 
F 6 HOH H 52 289 289 HOH HOH . 
F 6 HOH H 53 290 290 HOH HOH . 
F 6 HOH H 54 291 291 HOH HOH . 
F 6 HOH H 55 292 292 HOH HOH . 
F 6 HOH H 56 293 293 HOH HOH . 
F 6 HOH H 57 294 294 HOH HOH . 
F 6 HOH H 58 295 295 HOH HOH . 
F 6 HOH H 59 296 296 HOH HOH . 
F 6 HOH H 60 297 297 HOH HOH . 
F 6 HOH H 61 298 298 HOH HOH . 
F 6 HOH H 62 299 299 HOH HOH . 
F 6 HOH H 63 300 300 HOH HOH . 
F 6 HOH H 64 301 301 HOH HOH . 
F 6 HOH H 65 302 302 HOH HOH . 
F 6 HOH H 66 303 303 HOH HOH . 
F 6 HOH H 67 304 304 HOH HOH . 
F 6 HOH H 68 305 305 HOH HOH . 
F 6 HOH H 69 306 306 HOH HOH . 
F 6 HOH H 70 307 307 HOH HOH . 
F 6 HOH H 71 308 308 HOH HOH . 
F 6 HOH H 72 309 309 HOH HOH . 
F 6 HOH H 73 310 310 HOH HOH . 
F 6 HOH H 74 311 311 HOH HOH . 
F 6 HOH H 75 312 312 HOH HOH . 
F 6 HOH H 76 313 313 HOH HOH . 
F 6 HOH H 77 314 314 HOH HOH . 
F 6 HOH H 78 315 315 HOH HOH . 
F 6 HOH H 79 316 316 HOH HOH . 
F 6 HOH H 80 317 317 HOH HOH . 
F 6 HOH H 81 318 318 HOH HOH . 
F 6 HOH H 82 319 319 HOH HOH . 
F 6 HOH H 83 320 320 HOH HOH . 
F 6 HOH H 84 321 321 HOH HOH . 
F 6 HOH H 85 322 322 HOH HOH . 
F 6 HOH H 86 323 323 HOH HOH . 
F 6 HOH H 87 324 324 HOH HOH . 
F 6 HOH H 88 325 325 HOH HOH . 
F 6 HOH H 89 326 326 HOH HOH . 
F 6 HOH H 90 327 327 HOH HOH . 
F 6 HOH H 91 328 328 HOH HOH . 
F 6 HOH H 92 329 329 HOH HOH . 
F 6 HOH H 93 330 330 HOH HOH . 
F 6 HOH H 94 331 331 HOH HOH . 
F 6 HOH H 95 332 332 HOH HOH . 
F 6 HOH H 96 333 333 HOH HOH . 
F 6 HOH H 97 334 334 HOH HOH . 
F 6 HOH H 98 335 335 HOH HOH . 
F 6 HOH H 99 336 336 HOH HOH . 
F 6 HOH H 100 337 337 HOH HOH . 
F 6 HOH H 101 338 338 HOH HOH . 
F 6 HOH H 102 339 339 HOH HOH . 
F 6 HOH H 103 340 340 HOH HOH . 
F 6 HOH H 104 341 341 HOH HOH . 
F 6 HOH H 105 342 342 HOH HOH . 
G 6 HOH L 1 5 5 HOH HOH . 
G 6 HOH L 2 14 14 HOH HOH . 
G 6 HOH L 3 15 15 HOH HOH . 
G 6 HOH L 4 20 20 HOH HOH . 
G 6 HOH L 5 23 23 HOH HOH . 
G 6 HOH L 6 27 27 HOH HOH . 
G 6 HOH L 7 29 29 HOH HOH . 
G 6 HOH L 8 32 32 HOH HOH . 
G 6 HOH L 9 38 38 HOH HOH . 
G 6 HOH L 10 42 42 HOH HOH . 
G 6 HOH L 11 48 48 HOH HOH . 
G 6 HOH L 12 147 147 HOH HOH . 
G 6 HOH L 13 148 148 HOH HOH . 
G 6 HOH L 14 149 149 HOH HOH . 
G 6 HOH L 15 150 150 HOH HOH . 
G 6 HOH L 16 151 151 HOH HOH . 
G 6 HOH L 17 153 153 HOH HOH . 
G 6 HOH L 18 154 154 HOH HOH . 
G 6 HOH L 19 155 155 HOH HOH . 
G 6 HOH L 20 156 156 HOH HOH . 
G 6 HOH L 21 157 157 HOH HOH . 
G 6 HOH L 22 158 158 HOH HOH . 
G 6 HOH L 23 159 159 HOH HOH . 
G 6 HOH L 24 160 160 HOH HOH . 
G 6 HOH L 25 161 161 HOH HOH . 
G 6 HOH L 26 162 162 HOH HOH . 
G 6 HOH L 27 163 163 HOH HOH . 
G 6 HOH L 28 164 164 HOH HOH . 
G 6 HOH L 29 165 165 HOH HOH . 
G 6 HOH L 30 166 166 HOH HOH . 
G 6 HOH L 31 167 167 HOH HOH . 
G 6 HOH L 32 168 168 HOH HOH . 
G 6 HOH L 33 169 169 HOH HOH . 
G 6 HOH L 34 170 170 HOH HOH . 
G 6 HOH L 35 171 171 HOH HOH . 
G 6 HOH L 36 174 174 HOH HOH . 
G 6 HOH L 37 175 175 HOH HOH . 
G 6 HOH L 38 176 176 HOH HOH . 
G 6 HOH L 39 177 177 HOH HOH . 
G 6 HOH L 40 313 313 HOH HOH . 
G 6 HOH L 41 324 324 HOH HOH . 
G 6 HOH L 42 328 328 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               13.946 
_atom_site.Cartn_y               26.132 
_atom_site.Cartn_z               56.276 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        52.16 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           245 
_atom_site.auth_asym_id          H 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#