data_3F9C
#
_model_server_result.job_id            4NfODooOjIYujMA_M3INLQ 
_model_server_result.datetime_utc      '2025-01-09 06:30:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3f9c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":473}' 
#
_entry.id    3F9C 
#
_exptl.entry_id    3F9C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              166.155 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIISOPROPYL PHOSPHONATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.64 
_cell.angle_gamma         90 
_cell.entry_id            3F9C 
_cell.length_a            116.375 
_cell.length_b            82.4 
_cell.length_c            96.511 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3F9C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C HIS 226 A HIS 272 1_555 A N SER 227 A SER 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.619 ? 
covale ? covale2 A C SER 227 A SER 273 1_555 A N PHE 228 A PHE 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.619 ? 
covale ? covale3 A OG SER 227 A SER 273 1_555 C P DFP . A DFP 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.633 ? 
covale ? covale4 B C HIS 226 B HIS 272 1_555 B N SER 227 B SER 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.637 ? 
covale ? covale5 B C SER 227 B SER 273 1_555 B N PHE 228 B PHE 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.635 ? 
covale ? covale6 B OG SER 227 B SER 273 1_555 D P DFP . B DFP 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.617 ? 
#
_chem_comp.formula           'C6 H15 O3 P' 
_chem_comp.formula_weight    166.155 
_chem_comp.id                DFP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIISOPROPYL PHOSPHONATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 DFP sing 83 n n 
C1 C3 DFP sing 84 n n 
C1 O1P DFP sing 85 n n 
C1 H1 DFP sing 86 n n 
C2 H21 DFP sing 87 n n 
C2 H22 DFP sing 88 n n 
C2 H23 DFP sing 89 n n 
C3 H31 DFP sing 90 n n 
C3 H32 DFP sing 91 n n 
C3 H33 DFP sing 92 n n 
C1' C2' DFP sing 93 n n 
C1' C3' DFP sing 94 n n 
C1' O2P DFP sing 95 n n 
C1' H1' DFP sing 96 n n 
C2' "H2'1" DFP sing 97 n n 
C2' "H2'2" DFP sing 98 n n 
C2' "H2'3" DFP sing 99 n n 
C3' "H3'1" DFP sing 100 n n 
C3' "H3'2" DFP sing 101 n n 
C3' "H3'3" DFP sing 102 n n 
P O1P DFP sing 103 n n 
P O2P DFP sing 104 n n 
P O3P DFP doub 105 n n 
HP1 P DFP sing 106 n n 
#
_atom_sites.entry_id                     3F9C 
_atom_sites.fract_transf_matrix[1][1]    0.008593 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004125 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012136 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011493 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 DFP A 1 473 473 DFP DFP . 
D 2 DFP B 1 473 473 DFP DFP . 
E 3 HOH A 1 430 102 HOH HOH . 
E 3 HOH A 2 431 103 HOH HOH . 
E 3 HOH A 3 432 106 HOH HOH . 
E 3 HOH A 4 433 111 HOH HOH . 
E 3 HOH A 5 434 112 HOH HOH . 
E 3 HOH A 6 435 113 HOH HOH . 
E 3 HOH A 7 436 115 HOH HOH . 
E 3 HOH A 8 437 116 HOH HOH . 
E 3 HOH A 9 438 117 HOH HOH . 
E 3 HOH A 10 439 118 HOH HOH . 
E 3 HOH A 11 440 119 HOH HOH . 
E 3 HOH A 12 441 120 HOH HOH . 
E 3 HOH A 13 442 121 HOH HOH . 
E 3 HOH A 14 443 125 HOH HOH . 
E 3 HOH A 15 444 126 HOH HOH . 
E 3 HOH A 16 445 129 HOH HOH . 
E 3 HOH A 17 446 130 HOH HOH . 
E 3 HOH A 18 447 131 HOH HOH . 
E 3 HOH A 19 448 132 HOH HOH . 
E 3 HOH A 20 449 134 HOH HOH . 
E 3 HOH A 21 450 135 HOH HOH . 
E 3 HOH A 22 451 136 HOH HOH . 
E 3 HOH A 23 452 138 HOH HOH . 
E 3 HOH A 24 453 141 HOH HOH . 
E 3 HOH A 25 454 143 HOH HOH . 
E 3 HOH A 26 455 144 HOH HOH . 
E 3 HOH A 27 456 145 HOH HOH . 
E 3 HOH A 28 457 148 HOH HOH . 
E 3 HOH A 29 458 150 HOH HOH . 
E 3 HOH A 30 459 152 HOH HOH . 
E 3 HOH A 31 460 154 HOH HOH . 
E 3 HOH A 32 461 156 HOH HOH . 
E 3 HOH A 33 462 159 HOH HOH . 
E 3 HOH A 34 463 161 HOH HOH . 
E 3 HOH A 35 464 162 HOH HOH . 
E 3 HOH A 36 465 164 HOH HOH . 
E 3 HOH A 37 466 165 HOH HOH . 
E 3 HOH A 38 467 166 HOH HOH . 
E 3 HOH A 39 468 168 HOH HOH . 
E 3 HOH A 40 469 172 HOH HOH . 
E 3 HOH A 41 470 174 HOH HOH . 
E 3 HOH A 42 471 176 HOH HOH . 
E 3 HOH A 43 472 178 HOH HOH . 
E 3 HOH A 44 474 179 HOH HOH . 
E 3 HOH A 45 475 182 HOH HOH . 
E 3 HOH A 46 476 183 HOH HOH . 
E 3 HOH A 47 477 185 HOH HOH . 
E 3 HOH A 48 478 187 HOH HOH . 
E 3 HOH A 49 479 191 HOH HOH . 
E 3 HOH A 50 480 192 HOH HOH . 
E 3 HOH A 51 481 193 HOH HOH . 
E 3 HOH A 52 482 194 HOH HOH . 
E 3 HOH A 53 483 195 HOH HOH . 
E 3 HOH A 54 484 196 HOH HOH . 
E 3 HOH A 55 485 197 HOH HOH . 
E 3 HOH A 56 486 200 HOH HOH . 
E 3 HOH A 57 487 202 HOH HOH . 
E 3 HOH A 58 488 204 HOH HOH . 
E 3 HOH A 59 489 205 HOH HOH . 
E 3 HOH A 60 490 206 HOH HOH . 
E 3 HOH A 61 491 208 HOH HOH . 
E 3 HOH A 62 492 209 HOH HOH . 
E 3 HOH A 63 493 210 HOH HOH . 
E 3 HOH A 64 494 211 HOH HOH . 
E 3 HOH A 65 495 214 HOH HOH . 
E 3 HOH A 66 496 215 HOH HOH . 
E 3 HOH A 67 497 219 HOH HOH . 
E 3 HOH A 68 498 222 HOH HOH . 
E 3 HOH A 69 499 224 HOH HOH . 
E 3 HOH A 70 500 225 HOH HOH . 
E 3 HOH A 71 501 228 HOH HOH . 
E 3 HOH A 72 502 231 HOH HOH . 
E 3 HOH A 73 503 232 HOH HOH . 
E 3 HOH A 74 504 233 HOH HOH . 
E 3 HOH A 75 505 234 HOH HOH . 
E 3 HOH A 76 506 235 HOH HOH . 
E 3 HOH A 77 507 237 HOH HOH . 
E 3 HOH A 78 508 240 HOH HOH . 
E 3 HOH A 79 509 241 HOH HOH . 
E 3 HOH A 80 510 242 HOH HOH . 
E 3 HOH A 81 511 246 HOH HOH . 
E 3 HOH A 82 512 247 HOH HOH . 
E 3 HOH A 83 513 248 HOH HOH . 
E 3 HOH A 84 514 249 HOH HOH . 
E 3 HOH A 85 515 253 HOH HOH . 
E 3 HOH A 86 516 254 HOH HOH . 
E 3 HOH A 87 517 255 HOH HOH . 
E 3 HOH A 88 518 256 HOH HOH . 
E 3 HOH A 89 519 257 HOH HOH . 
E 3 HOH A 90 520 258 HOH HOH . 
E 3 HOH A 91 521 259 HOH HOH . 
E 3 HOH A 92 522 262 HOH HOH . 
E 3 HOH A 93 523 264 HOH HOH . 
E 3 HOH A 94 524 265 HOH HOH . 
E 3 HOH A 95 525 267 HOH HOH . 
E 3 HOH A 96 526 268 HOH HOH . 
F 3 HOH B 1 430 101 HOH HOH . 
F 3 HOH B 2 431 104 HOH HOH . 
F 3 HOH B 3 432 105 HOH HOH . 
F 3 HOH B 4 433 107 HOH HOH . 
F 3 HOH B 5 434 108 HOH HOH . 
F 3 HOH B 6 435 109 HOH HOH . 
F 3 HOH B 7 436 110 HOH HOH . 
F 3 HOH B 8 437 114 HOH HOH . 
F 3 HOH B 9 438 122 HOH HOH . 
F 3 HOH B 10 439 123 HOH HOH . 
F 3 HOH B 11 440 124 HOH HOH . 
F 3 HOH B 12 441 127 HOH HOH . 
F 3 HOH B 13 442 128 HOH HOH . 
F 3 HOH B 14 443 133 HOH HOH . 
F 3 HOH B 15 444 137 HOH HOH . 
F 3 HOH B 16 445 139 HOH HOH . 
F 3 HOH B 17 446 140 HOH HOH . 
F 3 HOH B 18 447 142 HOH HOH . 
F 3 HOH B 19 448 146 HOH HOH . 
F 3 HOH B 20 449 147 HOH HOH . 
F 3 HOH B 21 450 149 HOH HOH . 
F 3 HOH B 22 451 151 HOH HOH . 
F 3 HOH B 23 452 153 HOH HOH . 
F 3 HOH B 24 453 155 HOH HOH . 
F 3 HOH B 25 454 157 HOH HOH . 
F 3 HOH B 26 455 158 HOH HOH . 
F 3 HOH B 27 456 160 HOH HOH . 
F 3 HOH B 28 457 163 HOH HOH . 
F 3 HOH B 29 458 167 HOH HOH . 
F 3 HOH B 30 459 169 HOH HOH . 
F 3 HOH B 31 460 170 HOH HOH . 
F 3 HOH B 32 461 171 HOH HOH . 
F 3 HOH B 33 462 173 HOH HOH . 
F 3 HOH B 34 463 175 HOH HOH . 
F 3 HOH B 35 464 177 HOH HOH . 
F 3 HOH B 36 465 180 HOH HOH . 
F 3 HOH B 37 466 181 HOH HOH . 
F 3 HOH B 38 467 184 HOH HOH . 
F 3 HOH B 39 468 186 HOH HOH . 
F 3 HOH B 40 469 188 HOH HOH . 
F 3 HOH B 41 470 189 HOH HOH . 
F 3 HOH B 42 471 190 HOH HOH . 
F 3 HOH B 43 472 198 HOH HOH . 
F 3 HOH B 44 474 199 HOH HOH . 
F 3 HOH B 45 475 201 HOH HOH . 
F 3 HOH B 46 476 203 HOH HOH . 
F 3 HOH B 47 477 207 HOH HOH . 
F 3 HOH B 48 478 212 HOH HOH . 
F 3 HOH B 49 479 213 HOH HOH . 
F 3 HOH B 50 480 216 HOH HOH . 
F 3 HOH B 51 481 217 HOH HOH . 
F 3 HOH B 52 482 218 HOH HOH . 
F 3 HOH B 53 483 220 HOH HOH . 
F 3 HOH B 54 484 221 HOH HOH . 
F 3 HOH B 55 485 223 HOH HOH . 
F 3 HOH B 56 486 226 HOH HOH . 
F 3 HOH B 57 487 227 HOH HOH . 
F 3 HOH B 58 488 229 HOH HOH . 
F 3 HOH B 59 489 230 HOH HOH . 
F 3 HOH B 60 490 236 HOH HOH . 
F 3 HOH B 61 491 238 HOH HOH . 
F 3 HOH B 62 492 239 HOH HOH . 
F 3 HOH B 63 493 243 HOH HOH . 
F 3 HOH B 64 494 244 HOH HOH . 
F 3 HOH B 65 495 245 HOH HOH . 
F 3 HOH B 66 496 250 HOH HOH . 
F 3 HOH B 67 497 251 HOH HOH . 
F 3 HOH B 68 498 252 HOH HOH . 
F 3 HOH B 69 499 260 HOH HOH . 
F 3 HOH B 70 500 261 HOH HOH . 
F 3 HOH B 71 501 263 HOH HOH . 
F 3 HOH B 72 502 266 HOH HOH . 
F 3 HOH B 73 503 269 HOH HOH . 
F 3 HOH B 74 504 270 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DFP . . . C 2 -8.912 -12.582 -24.09 1 54.93 ? C1 DFP 473 A 1 
HETATM 2 C C2 DFP . . . C 2 -9.553 -12.54 -25.471 1 57.7 ? C2 DFP 473 A 1 
HETATM 3 C C3 DFP . . . C 2 -8.807 -14.03 -23.604 1 51.95 ? C3 DFP 473 A 1 
HETATM 4 C C1' DFP . . . C 2 -9.101 -8.954 -25.668 1 54.74 ? C1' DFP 473 A 1 
HETATM 5 C C2' DFP . . . C 2 -10.503 -9.534 -25.857 1 54.37 ? C2' DFP 473 A 1 
HETATM 6 C C3' DFP . . . C 2 -9.129 -7.427 -25.715 1 51.64 ? C3' DFP 473 A 1 
HETATM 7 P P DFP . . . C 2 -7.27 -10.304 -23.983 1 57.94 ? P DFP 473 A 1 
HETATM 8 O O1P DFP . . . C 2 -7.623 -11.943 -24.119 1 56.42 ? O1P DFP 473 A 1 
HETATM 9 O O2P DFP . . . C 2 -8.62 -9.402 -24.392 1 56.64 ? O2P DFP 473 A 1 
HETATM 10 O O3P DFP . . . C 2 -5.917 -9.979 -24.775 1 49.84 ? O3P DFP 473 A 1 
#
_model_server_stats.io_time_ms              92 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           10 
#