data_3FBA # _model_server_result.job_id QOTCCw9F5RPxMlWcm78Sqw _model_server_result.datetime_utc '2024-11-08 08:43:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fba # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":904}' # _entry.id 3FBA # _exptl.entry_id 3FBA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FBA _cell.length_a 144.127 _cell.length_b 144.127 _cell.length_c 144.127 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_665 -z+3/2,-x+1,y+1/2 0 0 -1 -1 0 0 0 1 0 216.1905 144.127 72.0635 3 'crystal symmetry operation' 10_646 -y+1,z-1/2,-x+3/2 0 -1 0 0 0 1 -1 0 0 144.127 -72.0635 216.1905 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O PRO 109 A PRO 103 1_555 C N4 C6B . A C6B 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? covale ? covale2 A N MET 111 A MET 105 1_555 C N3 C6B . A C6B 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc1 A OD2 ASP 14 A ASP 8 1_555 B ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 165 n n C1 C2 GOL sing 166 n n C1 H11 GOL sing 167 n n C1 H12 GOL sing 168 n n O1 HO1 GOL sing 169 n n C2 O2 GOL sing 170 n n C2 C3 GOL sing 171 n n C2 H2 GOL sing 172 n n O2 HO2 GOL sing 173 n n C3 O3 GOL sing 174 n n C3 H31 GOL sing 175 n n C3 H32 GOL sing 176 n n O3 HO3 GOL sing 177 n n # _atom_sites.entry_id 3FBA _atom_sites.fract_transf_matrix[1][1] 0.006938 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006938 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 900 900 ZN ZN . C 3 C6B A 1 901 901 C6B C6B . D 4 GPP A 1 903 903 GPP GPP . E 5 GOL A 1 904 904 GOL GOL . F 6 HOH A 1 160 1 HOH HOH . F 6 HOH A 2 161 2 HOH HOH . F 6 HOH A 3 162 3 HOH HOH . F 6 HOH A 4 163 4 HOH HOH . F 6 HOH A 5 164 5 HOH HOH . F 6 HOH A 6 165 6 HOH HOH . F 6 HOH A 7 166 7 HOH HOH . F 6 HOH A 8 167 8 HOH HOH . F 6 HOH A 9 168 9 HOH HOH . F 6 HOH A 10 169 10 HOH HOH . F 6 HOH A 11 170 11 HOH HOH . F 6 HOH A 12 171 12 HOH HOH . F 6 HOH A 13 172 13 HOH HOH . F 6 HOH A 14 173 14 HOH HOH . F 6 HOH A 15 174 15 HOH HOH . F 6 HOH A 16 175 16 HOH HOH . F 6 HOH A 17 176 17 HOH HOH . F 6 HOH A 18 177 18 HOH HOH . F 6 HOH A 19 178 19 HOH HOH . F 6 HOH A 20 179 20 HOH HOH . F 6 HOH A 21 180 21 HOH HOH . F 6 HOH A 22 181 22 HOH HOH . F 6 HOH A 23 182 23 HOH HOH . F 6 HOH A 24 183 24 HOH HOH . F 6 HOH A 25 184 25 HOH HOH . F 6 HOH A 26 185 26 HOH HOH . F 6 HOH A 27 186 27 HOH HOH . F 6 HOH A 28 187 28 HOH HOH . F 6 HOH A 29 188 29 HOH HOH . F 6 HOH A 30 189 30 HOH HOH . F 6 HOH A 31 190 31 HOH HOH . F 6 HOH A 32 191 32 HOH HOH . F 6 HOH A 33 192 33 HOH HOH . F 6 HOH A 34 193 34 HOH HOH . F 6 HOH A 35 194 35 HOH HOH . F 6 HOH A 36 195 36 HOH HOH . F 6 HOH A 37 196 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 5 96.022 68.575 152.331 1 64.07 ? C1 GOL 904 A 1 HETATM 2 O O1 GOL . . . E 5 95.627 69.103 151.055 1 62.91 ? O1 GOL 904 A 1 HETATM 3 C C2 GOL . . . E 5 95.51 67.134 152.398 1 65.46 ? C2 GOL 904 A 1 HETATM 4 O O2 GOL . . . E 5 96.402 66.293 153.161 1 67.22 ? O2 GOL 904 A 1 HETATM 5 C C3 GOL . . . E 5 94.08 67.094 152.96 1 64.28 ? C3 GOL 904 A 1 HETATM 6 O O3 GOL . . . E 5 93.17 66.941 151.856 1 62.11 ? O3 GOL 904 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #