data_3FC5 # _model_server_result.job_id BLikpiux-F_hXbpeHY8ELg _model_server_result.datetime_utc '2024-11-14 08:11:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fc5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":760}' # _entry.id 3FC5 # _exptl.entry_id 3FC5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FC5 _cell.length_a 51.623 _cell.length_b 110.276 _cell.length_c 164.671 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FC5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 D ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 D ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc4 D ZN ZN . A ZN 900 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc5 D ZN ZN . A ZN 900 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 129 n y N1 C8A H4B sing 130 n y C2 N2 H4B sing 131 n n C2 N3 H4B sing 132 n y N2 HN21 H4B sing 133 n n N2 HN22 H4B sing 134 n n N3 C4 H4B sing 135 n y N3 HN3 H4B sing 136 n n C4 O4 H4B doub 137 n n C4 C4A H4B sing 138 n y C4A C8A H4B doub 139 n y C4A N5 H4B sing 140 n n C8A N8 H4B sing 141 n n N5 C6 H4B sing 142 n n N5 HN5 H4B sing 143 n n N8 C7 H4B sing 144 n n N8 HN8 H4B sing 145 n n C6 C7 H4B sing 146 n n C6 C9 H4B sing 147 n n C6 H6 H4B sing 148 n n C7 H71 H4B sing 149 n n C7 H72 H4B sing 150 n n C9 O9 H4B sing 151 n n C9 C10 H4B sing 152 n n C9 H9 H4B sing 153 n n O9 HO9 H4B sing 154 n n C10 C11 H4B sing 155 n n C10 O10 H4B sing 156 n n C10 H10 H4B sing 157 n n C11 H111 H4B sing 158 n n C11 H112 H4B sing 159 n n C11 H113 H4B sing 160 n n O10 HO0 H4B sing 161 n n # _atom_sites.entry_id 3FC5 _atom_sites.fract_transf_matrix[1][1] 0.019371 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009068 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 750 750 HEM HEM . D 3 ZN A 1 900 900 ZN ZN . E 4 H4B A 1 760 760 H4B H4B . F 5 ARG A 1 770 770 ARG ARG . G 4 H4B B 1 761 761 H4B H4B . H 2 HEM B 1 750 750 HEM HEM . I 5 ARG B 1 771 771 ARG ARG . J 6 HOH A 1 3 3 HOH HOH . J 6 HOH A 2 8 8 HOH HOH . J 6 HOH A 3 10 10 HOH HOH . J 6 HOH A 4 12 12 HOH HOH . J 6 HOH A 5 13 13 HOH HOH . J 6 HOH A 6 17 17 HOH HOH . J 6 HOH A 7 19 19 HOH HOH . J 6 HOH A 8 27 27 HOH HOH . J 6 HOH A 9 28 28 HOH HOH . J 6 HOH A 10 29 29 HOH HOH . J 6 HOH A 11 30 30 HOH HOH . J 6 HOH A 12 31 31 HOH HOH . J 6 HOH A 13 33 33 HOH HOH . J 6 HOH A 14 34 34 HOH HOH . J 6 HOH A 15 35 35 HOH HOH . J 6 HOH A 16 36 36 HOH HOH . J 6 HOH A 17 38 38 HOH HOH . J 6 HOH A 18 41 41 HOH HOH . J 6 HOH A 19 42 42 HOH HOH . J 6 HOH A 20 45 45 HOH HOH . J 6 HOH A 21 53 53 HOH HOH . J 6 HOH A 22 54 54 HOH HOH . J 6 HOH A 23 60 60 HOH HOH . J 6 HOH A 24 64 64 HOH HOH . J 6 HOH A 25 67 67 HOH HOH . J 6 HOH A 26 68 68 HOH HOH . J 6 HOH A 27 69 69 HOH HOH . J 6 HOH A 28 70 70 HOH HOH . J 6 HOH A 29 71 71 HOH HOH . J 6 HOH A 30 72 72 HOH HOH . J 6 HOH A 31 74 74 HOH HOH . J 6 HOH A 32 75 75 HOH HOH . J 6 HOH A 33 79 79 HOH HOH . J 6 HOH A 34 80 80 HOH HOH . J 6 HOH A 35 81 81 HOH HOH . J 6 HOH A 36 86 86 HOH HOH . J 6 HOH A 37 87 87 HOH HOH . J 6 HOH A 38 88 88 HOH HOH . J 6 HOH A 39 91 91 HOH HOH . J 6 HOH A 40 96 96 HOH HOH . J 6 HOH A 41 97 97 HOH HOH . J 6 HOH A 42 99 99 HOH HOH . J 6 HOH A 43 100 100 HOH HOH . J 6 HOH A 44 102 102 HOH HOH . J 6 HOH A 45 105 105 HOH HOH . J 6 HOH A 46 106 106 HOH HOH . J 6 HOH A 47 110 110 HOH HOH . J 6 HOH A 48 111 111 HOH HOH . J 6 HOH A 49 116 116 HOH HOH . J 6 HOH A 50 119 119 HOH HOH . J 6 HOH A 51 120 120 HOH HOH . J 6 HOH A 52 121 121 HOH HOH . J 6 HOH A 53 123 123 HOH HOH . J 6 HOH A 54 124 124 HOH HOH . J 6 HOH A 55 125 125 HOH HOH . J 6 HOH A 56 126 126 HOH HOH . J 6 HOH A 57 128 128 HOH HOH . J 6 HOH A 58 131 131 HOH HOH . J 6 HOH A 59 132 132 HOH HOH . J 6 HOH A 60 134 134 HOH HOH . J 6 HOH A 61 136 136 HOH HOH . J 6 HOH A 62 137 137 HOH HOH . J 6 HOH A 63 138 138 HOH HOH . J 6 HOH A 64 139 139 HOH HOH . J 6 HOH A 65 140 140 HOH HOH . J 6 HOH A 66 142 142 HOH HOH . J 6 HOH A 67 143 143 HOH HOH . J 6 HOH A 68 146 146 HOH HOH . J 6 HOH A 69 147 147 HOH HOH . J 6 HOH A 70 150 150 HOH HOH . J 6 HOH A 71 155 155 HOH HOH . J 6 HOH A 72 157 157 HOH HOH . J 6 HOH A 73 158 158 HOH HOH . J 6 HOH A 74 161 161 HOH HOH . J 6 HOH A 75 162 162 HOH HOH . J 6 HOH A 76 163 163 HOH HOH . J 6 HOH A 77 165 165 HOH HOH . J 6 HOH A 78 166 166 HOH HOH . J 6 HOH A 79 167 167 HOH HOH . J 6 HOH A 80 168 168 HOH HOH . J 6 HOH A 81 169 169 HOH HOH . J 6 HOH A 82 172 172 HOH HOH . J 6 HOH A 83 173 173 HOH HOH . J 6 HOH A 84 174 174 HOH HOH . J 6 HOH A 85 175 175 HOH HOH . J 6 HOH A 86 182 182 HOH HOH . J 6 HOH A 87 183 183 HOH HOH . J 6 HOH A 88 184 184 HOH HOH . J 6 HOH A 89 185 185 HOH HOH . J 6 HOH A 90 186 186 HOH HOH . J 6 HOH A 91 188 188 HOH HOH . J 6 HOH A 92 190 190 HOH HOH . J 6 HOH A 93 191 191 HOH HOH . J 6 HOH A 94 192 192 HOH HOH . J 6 HOH A 95 195 195 HOH HOH . J 6 HOH A 96 196 196 HOH HOH . K 6 HOH B 1 1 1 HOH HOH . K 6 HOH B 2 2 2 HOH HOH . K 6 HOH B 3 4 4 HOH HOH . K 6 HOH B 4 5 5 HOH HOH . K 6 HOH B 5 6 6 HOH HOH . K 6 HOH B 6 7 7 HOH HOH . K 6 HOH B 7 9 9 HOH HOH . K 6 HOH B 8 11 11 HOH HOH . K 6 HOH B 9 14 14 HOH HOH . K 6 HOH B 10 15 15 HOH HOH . K 6 HOH B 11 16 16 HOH HOH . K 6 HOH B 12 18 18 HOH HOH . K 6 HOH B 13 20 20 HOH HOH . K 6 HOH B 14 21 21 HOH HOH . K 6 HOH B 15 22 22 HOH HOH . K 6 HOH B 16 23 23 HOH HOH . K 6 HOH B 17 24 24 HOH HOH . K 6 HOH B 18 25 25 HOH HOH . K 6 HOH B 19 26 26 HOH HOH . K 6 HOH B 20 32 32 HOH HOH . K 6 HOH B 21 37 37 HOH HOH . K 6 HOH B 22 39 39 HOH HOH . K 6 HOH B 23 40 40 HOH HOH . K 6 HOH B 24 43 43 HOH HOH . K 6 HOH B 25 44 44 HOH HOH . K 6 HOH B 26 46 46 HOH HOH . K 6 HOH B 27 47 47 HOH HOH . K 6 HOH B 28 48 48 HOH HOH . K 6 HOH B 29 49 49 HOH HOH . K 6 HOH B 30 50 50 HOH HOH . K 6 HOH B 31 51 51 HOH HOH . K 6 HOH B 32 52 52 HOH HOH . K 6 HOH B 33 55 55 HOH HOH . K 6 HOH B 34 56 56 HOH HOH . K 6 HOH B 35 57 57 HOH HOH . K 6 HOH B 36 58 58 HOH HOH . K 6 HOH B 37 59 59 HOH HOH . K 6 HOH B 38 61 61 HOH HOH . K 6 HOH B 39 62 62 HOH HOH . K 6 HOH B 40 63 63 HOH HOH . K 6 HOH B 41 65 65 HOH HOH . K 6 HOH B 42 66 66 HOH HOH . K 6 HOH B 43 73 73 HOH HOH . K 6 HOH B 44 76 76 HOH HOH . K 6 HOH B 45 77 77 HOH HOH . K 6 HOH B 46 78 78 HOH HOH . K 6 HOH B 47 82 82 HOH HOH . K 6 HOH B 48 83 83 HOH HOH . K 6 HOH B 49 84 84 HOH HOH . K 6 HOH B 50 85 85 HOH HOH . K 6 HOH B 51 89 89 HOH HOH . K 6 HOH B 52 90 90 HOH HOH . K 6 HOH B 53 92 92 HOH HOH . K 6 HOH B 54 93 93 HOH HOH . K 6 HOH B 55 94 94 HOH HOH . K 6 HOH B 56 95 95 HOH HOH . K 6 HOH B 57 98 98 HOH HOH . K 6 HOH B 58 101 101 HOH HOH . K 6 HOH B 59 103 103 HOH HOH . K 6 HOH B 60 104 104 HOH HOH . K 6 HOH B 61 107 107 HOH HOH . K 6 HOH B 62 108 108 HOH HOH . K 6 HOH B 63 109 109 HOH HOH . K 6 HOH B 64 112 112 HOH HOH . K 6 HOH B 65 113 113 HOH HOH . K 6 HOH B 66 114 114 HOH HOH . K 6 HOH B 67 115 115 HOH HOH . K 6 HOH B 68 117 117 HOH HOH . K 6 HOH B 69 118 118 HOH HOH . K 6 HOH B 70 122 122 HOH HOH . K 6 HOH B 71 127 127 HOH HOH . K 6 HOH B 72 129 129 HOH HOH . K 6 HOH B 73 130 130 HOH HOH . K 6 HOH B 74 133 133 HOH HOH . K 6 HOH B 75 135 135 HOH HOH . K 6 HOH B 76 141 141 HOH HOH . K 6 HOH B 77 144 144 HOH HOH . K 6 HOH B 78 145 145 HOH HOH . K 6 HOH B 79 148 148 HOH HOH . K 6 HOH B 80 149 149 HOH HOH . K 6 HOH B 81 151 151 HOH HOH . K 6 HOH B 82 152 152 HOH HOH . K 6 HOH B 83 153 153 HOH HOH . K 6 HOH B 84 154 154 HOH HOH . K 6 HOH B 85 156 156 HOH HOH . K 6 HOH B 86 159 159 HOH HOH . K 6 HOH B 87 160 160 HOH HOH . K 6 HOH B 88 164 164 HOH HOH . K 6 HOH B 89 170 170 HOH HOH . K 6 HOH B 90 171 171 HOH HOH . K 6 HOH B 91 176 176 HOH HOH . K 6 HOH B 92 177 177 HOH HOH . K 6 HOH B 93 178 178 HOH HOH . K 6 HOH B 94 179 179 HOH HOH . K 6 HOH B 95 180 180 HOH HOH . K 6 HOH B 96 181 181 HOH HOH . K 6 HOH B 97 187 187 HOH HOH . K 6 HOH B 98 189 189 HOH HOH . K 6 HOH B 99 193 193 HOH HOH . K 6 HOH B 100 194 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . E 4 10.227 2.591 34.175 1 43.3 ? N1 H4B 760 A 1 HETATM 2 C C2 H4B . . . E 4 10.479 2.131 32.755 1 37.21 ? C2 H4B 760 A 1 HETATM 3 N N2 H4B . . . E 4 11.846 2.024 32.243 1 38.88 ? N2 H4B 760 A 1 HETATM 4 N N3 H4B . . . E 4 9.329 1.807 31.865 1 36.48 ? N3 H4B 760 A 1 HETATM 5 C C4 H4B . . . E 4 7.914 1.932 32.369 1 33.1 ? C4 H4B 760 A 1 HETATM 6 O O4 H4B . . . E 4 6.843 1.6 31.522 1 36.69 ? O4 H4B 760 A 1 HETATM 7 C C4A H4B . . . E 4 7.654 2.401 33.8 1 34.82 ? C4A H4B 760 A 1 HETATM 8 C C8A H4B . . . E 4 8.8 2.727 34.681 1 38.84 ? C8A H4B 760 A 1 HETATM 9 N N5 H4B . . . E 4 6.286 2.596 34.314 1 36.38 ? N5 H4B 760 A 1 HETATM 10 N N8 H4B . . . E 4 8.564 3.155 36.042 1 30.24 ? N8 H4B 760 A 1 HETATM 11 C C6 H4B . . . E 4 6.185 3.61 35.369 1 37.16 ? C6 H4B 760 A 1 HETATM 12 C C7 H4B . . . E 4 7.171 3.261 36.524 1 32.56 ? C7 H4B 760 A 1 HETATM 13 C C9 H4B . . . E 4 4.79 3.608 36.02 1 38.05 ? C9 H4B 760 A 1 HETATM 14 O O9 H4B . . . E 4 4.565 2.316 36.49 1 38.57 ? O9 H4B 760 A 1 HETATM 15 C C10 H4B . . . E 4 4.882 4.538 37.253 1 37.2 ? C10 H4B 760 A 1 HETATM 16 C C11 H4B . . . E 4 3.582 4.451 38.074 1 40.24 ? C11 H4B 760 A 1 HETATM 17 O O10 H4B . . . E 4 5.059 5.843 36.789 1 33.72 ? O10 H4B 760 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #