data_3FCF # _model_server_result.job_id vOrT3h6HmvFgPx3tGnQHmA _model_server_result.datetime_utc '2024-12-23 05:11:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fcf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3FCF # _exptl.entry_id 3FCF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 346.295 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[(1E,7E)-8-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-3,6-dioxa-2,7-diazaocta-1,7-dien-1-yl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FCF _cell.length_a 43.251 _cell.length_b 69.26 _cell.length_c 70.097 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FCF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H14 N4 O6' _chem_comp.formula_weight 346.295 _chem_comp.id FCF _chem_comp.mon_nstd_flag . _chem_comp.name '3-[(1E,7E)-8-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-3,6-dioxa-2,7-diazaocta-1,7-dien-1-yl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O40 HO40 FCF sing 83 n n C38 O40 FCF sing 84 n n O39 C38 FCF doub 85 n n C5 C38 FCF sing 86 n n C5 C4 FCF sing 87 n y C6 C5 FCF doub 88 n y C6 H6 FCF sing 89 n n C1 C6 FCF sing 90 n y C1 C2 FCF doub 91 n y C1 H1 FCF sing 92 n n C4 H4 FCF sing 93 n n C3 C4 FCF doub 94 n y C3 C17 FCF sing 95 n n C2 C3 FCF sing 96 n y C2 H2 FCF sing 97 n n C17 H17 FCF sing 98 n n N18 C17 FCF doub 99 e n N18 O21 FCF sing 100 n n C22 O21 FCF sing 101 n n C22 C23 FCF sing 102 n n C22 H22 FCF sing 103 n n C22 H22A FCF sing 104 n n C23 O27 FCF sing 105 n n C23 H23 FCF sing 106 n n C23 H23A FCF sing 107 n n O27 N31 FCF sing 108 n n N31 C30 FCF doub 109 e n C30 C16 FCF sing 110 n n C30 H30 FCF sing 111 n n C16 C15 FCF doub 112 n n N11 C16 FCF sing 113 n n N11 C12 FCF sing 114 n n C15 C14 FCF sing 115 n n C14 O33 FCF doub 116 n n N13 C14 FCF sing 117 n n N13 HN13 FCF sing 118 n n C12 N13 FCF sing 119 n n O34 C12 FCF doub 120 n n N11 H13 FCF sing 121 n n C15 H15 FCF sing 122 n n # _atom_sites.entry_id 3FCF _atom_sites.fract_transf_matrix[1][1] 0.023121 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014438 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FCF A 1 1 1 FCF FCF . C 3 SCN A 1 305 1 SCN SCN . D 3 SCN A 1 2 2 SCN SCN . E 4 HOH A 1 3 3 HOH HOH . E 4 HOH A 2 4 4 HOH HOH . E 4 HOH A 3 5 5 HOH HOH . E 4 HOH A 4 6 6 HOH HOH . E 4 HOH A 5 7 7 HOH HOH . E 4 HOH A 6 8 8 HOH HOH . E 4 HOH A 7 9 9 HOH HOH . E 4 HOH A 8 10 10 HOH HOH . E 4 HOH A 9 11 11 HOH HOH . E 4 HOH A 10 12 12 HOH HOH . E 4 HOH A 11 13 13 HOH HOH . E 4 HOH A 12 14 14 HOH HOH . E 4 HOH A 13 15 15 HOH HOH . E 4 HOH A 14 16 16 HOH HOH . E 4 HOH A 15 17 17 HOH HOH . E 4 HOH A 16 18 18 HOH HOH . E 4 HOH A 17 19 19 HOH HOH . E 4 HOH A 18 20 20 HOH HOH . E 4 HOH A 19 21 21 HOH HOH . E 4 HOH A 20 22 22 HOH HOH . E 4 HOH A 21 23 23 HOH HOH . E 4 HOH A 22 24 24 HOH HOH . E 4 HOH A 23 25 25 HOH HOH . E 4 HOH A 24 26 26 HOH HOH . E 4 HOH A 25 27 27 HOH HOH . E 4 HOH A 26 28 28 HOH HOH . E 4 HOH A 27 29 29 HOH HOH . E 4 HOH A 28 30 30 HOH HOH . E 4 HOH A 29 31 31 HOH HOH . E 4 HOH A 30 32 32 HOH HOH . E 4 HOH A 31 33 33 HOH HOH . E 4 HOH A 32 34 34 HOH HOH . E 4 HOH A 33 35 35 HOH HOH . E 4 HOH A 34 36 36 HOH HOH . E 4 HOH A 35 37 37 HOH HOH . E 4 HOH A 36 38 38 HOH HOH . E 4 HOH A 37 39 39 HOH HOH . E 4 HOH A 38 40 40 HOH HOH . E 4 HOH A 39 41 41 HOH HOH . E 4 HOH A 40 42 42 HOH HOH . E 4 HOH A 41 43 43 HOH HOH . E 4 HOH A 42 44 44 HOH HOH . E 4 HOH A 43 45 45 HOH HOH . E 4 HOH A 44 46 46 HOH HOH . E 4 HOH A 45 47 47 HOH HOH . E 4 HOH A 46 48 48 HOH HOH . E 4 HOH A 47 49 49 HOH HOH . E 4 HOH A 48 50 50 HOH HOH . E 4 HOH A 49 51 51 HOH HOH . E 4 HOH A 50 52 52 HOH HOH . E 4 HOH A 51 53 53 HOH HOH . E 4 HOH A 52 54 54 HOH HOH . E 4 HOH A 53 55 55 HOH HOH . E 4 HOH A 54 56 56 HOH HOH . E 4 HOH A 55 57 57 HOH HOH . E 4 HOH A 56 58 58 HOH HOH . E 4 HOH A 57 59 59 HOH HOH . E 4 HOH A 58 60 60 HOH HOH . E 4 HOH A 59 61 61 HOH HOH . E 4 HOH A 60 62 62 HOH HOH . E 4 HOH A 61 63 63 HOH HOH . E 4 HOH A 62 64 64 HOH HOH . E 4 HOH A 63 65 65 HOH HOH . E 4 HOH A 64 66 66 HOH HOH . E 4 HOH A 65 67 67 HOH HOH . E 4 HOH A 66 68 68 HOH HOH . E 4 HOH A 67 69 69 HOH HOH . E 4 HOH A 68 70 70 HOH HOH . E 4 HOH A 69 71 71 HOH HOH . E 4 HOH A 70 72 72 HOH HOH . E 4 HOH A 71 73 73 HOH HOH . E 4 HOH A 72 74 74 HOH HOH . E 4 HOH A 73 75 75 HOH HOH . E 4 HOH A 74 76 76 HOH HOH . E 4 HOH A 75 77 77 HOH HOH . E 4 HOH A 76 78 78 HOH HOH . E 4 HOH A 77 79 79 HOH HOH . E 4 HOH A 78 80 80 HOH HOH . E 4 HOH A 79 81 81 HOH HOH . E 4 HOH A 80 306 1 HOH HOH . E 4 HOH A 81 307 2 HOH HOH . E 4 HOH A 82 308 1 HOH HOH . E 4 HOH A 83 309 2 HOH HOH . E 4 HOH A 84 310 3 HOH HOH . E 4 HOH A 85 311 4 HOH HOH . E 4 HOH A 86 312 5 HOH HOH . E 4 HOH A 87 313 6 HOH HOH . E 4 HOH A 88 314 7 HOH HOH . E 4 HOH A 89 315 8 HOH HOH . E 4 HOH A 90 316 9 HOH HOH . E 4 HOH A 91 317 10 HOH HOH . E 4 HOH A 92 318 11 HOH HOH . E 4 HOH A 93 319 12 HOH HOH . E 4 HOH A 94 320 13 HOH HOH . E 4 HOH A 95 321 14 HOH HOH . E 4 HOH A 96 322 15 HOH HOH . E 4 HOH A 97 323 16 HOH HOH . E 4 HOH A 98 324 17 HOH HOH . E 4 HOH A 99 325 18 HOH HOH . E 4 HOH A 100 326 19 HOH HOH . E 4 HOH A 101 327 20 HOH HOH . E 4 HOH A 102 328 21 HOH HOH . E 4 HOH A 103 329 22 HOH HOH . E 4 HOH A 104 330 24 HOH HOH . E 4 HOH A 105 331 25 HOH HOH . E 4 HOH A 106 332 26 HOH HOH . E 4 HOH A 107 333 27 HOH HOH . E 4 HOH A 108 334 28 HOH HOH . E 4 HOH A 109 335 29 HOH HOH . E 4 HOH A 110 336 30 HOH HOH . E 4 HOH A 111 337 31 HOH HOH . E 4 HOH A 112 338 32 HOH HOH . E 4 HOH A 113 339 33 HOH HOH . E 4 HOH A 114 340 34 HOH HOH . E 4 HOH A 115 341 35 HOH HOH . E 4 HOH A 116 342 36 HOH HOH . E 4 HOH A 117 343 37 HOH HOH . E 4 HOH A 118 344 38 HOH HOH . E 4 HOH A 119 345 39 HOH HOH . E 4 HOH A 120 346 40 HOH HOH . E 4 HOH A 121 347 1 HOH HOH . E 4 HOH A 122 348 2 HOH HOH . E 4 HOH A 123 349 3 HOH HOH . E 4 HOH A 124 350 4 HOH HOH . E 4 HOH A 125 351 5 HOH HOH . E 4 HOH A 126 352 6 HOH HOH . E 4 HOH A 127 353 7 HOH HOH . E 4 HOH A 128 354 8 HOH HOH . E 4 HOH A 129 355 9 HOH HOH . E 4 HOH A 130 356 10 HOH HOH . E 4 HOH A 131 357 11 HOH HOH . E 4 HOH A 132 358 12 HOH HOH . E 4 HOH A 133 359 13 HOH HOH . E 4 HOH A 134 360 14 HOH HOH . E 4 HOH A 135 361 15 HOH HOH . E 4 HOH A 136 362 16 HOH HOH . E 4 HOH A 137 363 17 HOH HOH . E 4 HOH A 138 364 18 HOH HOH . E 4 HOH A 139 365 19 HOH HOH . E 4 HOH A 140 366 20 HOH HOH . E 4 HOH A 141 367 21 HOH HOH . E 4 HOH A 142 368 22 HOH HOH . E 4 HOH A 143 369 23 HOH HOH . E 4 HOH A 144 370 24 HOH HOH . E 4 HOH A 145 371 25 HOH HOH . E 4 HOH A 146 372 26 HOH HOH . E 4 HOH A 147 373 27 HOH HOH . E 4 HOH A 148 374 28 HOH HOH . E 4 HOH A 149 375 29 HOH HOH . E 4 HOH A 150 376 30 HOH HOH . E 4 HOH A 151 377 31 HOH HOH . E 4 HOH A 152 378 32 HOH HOH . E 4 HOH A 153 379 33 HOH HOH . E 4 HOH A 154 380 34 HOH HOH . E 4 HOH A 155 381 35 HOH HOH . E 4 HOH A 156 382 36 HOH HOH . E 4 HOH A 157 383 37 HOH HOH . E 4 HOH A 158 384 38 HOH HOH . E 4 HOH A 159 385 39 HOH HOH . E 4 HOH A 160 386 40 HOH HOH . E 4 HOH A 161 387 82 HOH HOH . E 4 HOH A 162 388 83 HOH HOH . E 4 HOH A 163 389 84 HOH HOH . E 4 HOH A 164 390 85 HOH HOH . E 4 HOH A 165 391 86 HOH HOH . E 4 HOH A 166 392 87 HOH HOH . E 4 HOH A 167 393 88 HOH HOH . E 4 HOH A 168 394 89 HOH HOH . E 4 HOH A 169 395 90 HOH HOH . E 4 HOH A 170 396 91 HOH HOH . E 4 HOH A 171 397 92 HOH HOH . E 4 HOH A 172 398 93 HOH HOH . E 4 HOH A 173 399 94 HOH HOH . E 4 HOH A 174 400 95 HOH HOH . E 4 HOH A 175 401 96 HOH HOH . E 4 HOH A 176 402 97 HOH HOH . E 4 HOH A 177 403 98 HOH HOH . E 4 HOH A 178 404 99 HOH HOH . E 4 HOH A 179 405 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O40 FCF . . . B 2 -11.894 -7.536 -1.442 1 44.51 ? O40 FCF 1 A 1 HETATM 2 C C38 FCF . . . B 2 -12.415 -7.375 -2.766 1 44.53 ? C38 FCF 1 A 1 HETATM 3 O O39 FCF . . . B 2 -12.631 -8.361 -3.507 1 45.05 ? O39 FCF 1 A 1 HETATM 4 C C5 FCF . . . B 2 -12.72 -5.992 -3.272 1 44.46 ? C5 FCF 1 A 1 HETATM 5 C C6 FCF . . . B 2 -13.078 -5.79 -4.608 1 44.41 ? C6 FCF 1 A 1 HETATM 6 C C1 FCF . . . B 2 -13.365 -4.507 -5.076 1 44.43 ? C1 FCF 1 A 1 HETATM 7 C C4 FCF . . . B 2 -12.652 -4.901 -2.402 1 44.43 ? C4 FCF 1 A 1 HETATM 8 C C3 FCF . . . B 2 -12.936 -3.616 -2.866 1 44.14 ? C3 FCF 1 A 1 HETATM 9 C C2 FCF . . . B 2 -13.293 -3.422 -4.204 1 44.38 ? C2 FCF 1 A 1 HETATM 10 C C17 FCF . . . B 2 -12.857 -2.472 -1.926 1 43.97 ? C17 FCF 1 A 1 HETATM 11 N N18 FCF . . . B 2 -13.2 -1.308 -2.273 1 42.98 ? N18 FCF 1 A 1 HETATM 12 O O21 FCF . . . B 2 -13.121 -0.282 -1.388 1 42.14 ? O21 FCF 1 A 1 HETATM 13 C C22 FCF . . . B 2 -13.468 1.045 -1.79 1 41.06 ? C22 FCF 1 A 1 HETATM 14 C C23 FCF . . . B 2 -14.977 1.246 -1.666 1 40.01 ? C23 FCF 1 A 1 HETATM 15 O O27 FCF . . . B 2 -15.301 1.922 -0.447 1 38.86 ? O27 FCF 1 A 1 HETATM 16 N N31 FCF . . . B 2 -15.116 1.303 0.747 1 35.86 ? N31 FCF 1 A 1 HETATM 17 C C30 FCF . . . B 2 -15.818 1.59 1.755 1 31.75 ? C30 FCF 1 A 1 HETATM 18 C C16 FCF . . . B 2 -15.566 0.879 3.027 1 30.78 ? C16 FCF 1 A 1 HETATM 19 N N11 FCF . . . B 2 -14.997 -0.337 2.996 1 29.65 ? N11 FCF 1 A 1 HETATM 20 C C15 FCF . . . B 2 -15.908 1.451 4.249 1 29.79 ? C15 FCF 1 A 1 HETATM 21 C C14 FCF . . . B 2 -15.641 0.725 5.409 1 29.69 ? C14 FCF 1 A 1 HETATM 22 O O33 FCF . . . B 2 -15.925 1.192 6.532 1 29.47 ? O33 FCF 1 A 1 HETATM 23 N N13 FCF . . . B 2 -15.07 -0.487 5.319 1 29.99 ? N13 FCF 1 A 1 HETATM 24 C C12 FCF . . . B 2 -14.748 -1.013 4.127 1 29.81 ? C12 FCF 1 A 1 HETATM 25 O O34 FCF . . . B 2 -14.213 -2.141 4.07 1 29.6 ? O34 FCF 1 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #