data_3FE6 # _model_server_result.job_id nNxgLPHGPqMdTwOrXFma2Q _model_server_result.datetime_utc '2024-11-09 02:22:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fe6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":121}' # _entry.id 3FE6 # _exptl.entry_id 3FE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FE6 _cell.length_a 82.879 _cell.length_b 84.21 _cell.length_c 46.831 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 20 A CYS 20 1_555 A SG CYS 51 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf2 A SG CYS 47 A CYS 47 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf3 A SG CYS 89 A CYS 89 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 259 n n C1 C2 GOL sing 260 n n C1 H11 GOL sing 261 n n C1 H12 GOL sing 262 n n O1 HO1 GOL sing 263 n n C2 O2 GOL sing 264 n n C2 C3 GOL sing 265 n n C2 H2 GOL sing 266 n n O2 HO2 GOL sing 267 n n C3 O3 GOL sing 268 n n C3 H31 GOL sing 269 n n C3 H32 GOL sing 270 n n O3 HO3 GOL sing 271 n n # _atom_sites.entry_id 3FE6 _atom_sites.fract_transf_matrix[1][1] 0.012066 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011875 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CMJ A 1 120 1 CMJ CME . C 3 GOL A 1 121 2 GOL GOL . D 4 CL A 1 122 1 CL CL . E 5 HOH A 1 123 123 HOH HOH . E 5 HOH A 2 124 2 HOH HOH . E 5 HOH A 3 125 3 HOH HOH . E 5 HOH A 4 126 4 HOH HOH . E 5 HOH A 5 127 5 HOH HOH . E 5 HOH A 6 128 7 HOH HOH . E 5 HOH A 7 129 129 HOH HOH . E 5 HOH A 8 130 8 HOH HOH . E 5 HOH A 9 131 9 HOH HOH . E 5 HOH A 10 132 132 HOH HOH . E 5 HOH A 11 133 10 HOH HOH . E 5 HOH A 12 134 11 HOH HOH . E 5 HOH A 13 135 12 HOH HOH . E 5 HOH A 14 136 13 HOH HOH . E 5 HOH A 15 137 137 HOH HOH . E 5 HOH A 16 138 138 HOH HOH . E 5 HOH A 17 139 14 HOH HOH . E 5 HOH A 18 140 16 HOH HOH . E 5 HOH A 19 141 17 HOH HOH . E 5 HOH A 20 142 18 HOH HOH . E 5 HOH A 21 143 19 HOH HOH . E 5 HOH A 22 144 20 HOH HOH . E 5 HOH A 23 145 21 HOH HOH . E 5 HOH A 24 146 22 HOH HOH . E 5 HOH A 25 147 23 HOH HOH . E 5 HOH A 26 148 24 HOH HOH . E 5 HOH A 27 149 149 HOH HOH . E 5 HOH A 28 150 25 HOH HOH . E 5 HOH A 29 151 27 HOH HOH . E 5 HOH A 30 152 152 HOH HOH . E 5 HOH A 31 153 153 HOH HOH . E 5 HOH A 32 154 154 HOH HOH . E 5 HOH A 33 155 155 HOH HOH . E 5 HOH A 34 156 28 HOH HOH . E 5 HOH A 35 157 30 HOH HOH . E 5 HOH A 36 158 32 HOH HOH . E 5 HOH A 37 159 159 HOH HOH . E 5 HOH A 38 160 33 HOH HOH . E 5 HOH A 39 161 161 HOH HOH . E 5 HOH A 40 162 35 HOH HOH . E 5 HOH A 41 163 37 HOH HOH . E 5 HOH A 42 164 41 HOH HOH . E 5 HOH A 43 165 165 HOH HOH . E 5 HOH A 44 166 42 HOH HOH . E 5 HOH A 45 167 47 HOH HOH . E 5 HOH A 46 168 168 HOH HOH . E 5 HOH A 47 169 48 HOH HOH . E 5 HOH A 48 170 49 HOH HOH . E 5 HOH A 49 171 50 HOH HOH . E 5 HOH A 50 172 51 HOH HOH . E 5 HOH A 51 173 54 HOH HOH . E 5 HOH A 52 174 55 HOH HOH . E 5 HOH A 53 175 56 HOH HOH . E 5 HOH A 54 176 57 HOH HOH . E 5 HOH A 55 177 177 HOH HOH . E 5 HOH A 56 178 58 HOH HOH . E 5 HOH A 57 179 59 HOH HOH . E 5 HOH A 58 180 63 HOH HOH . E 5 HOH A 59 181 181 HOH HOH . E 5 HOH A 60 182 65 HOH HOH . E 5 HOH A 61 183 183 HOH HOH . E 5 HOH A 62 184 184 HOH HOH . E 5 HOH A 63 185 66 HOH HOH . E 5 HOH A 64 186 67 HOH HOH . E 5 HOH A 65 187 187 HOH HOH . E 5 HOH A 66 188 188 HOH HOH . E 5 HOH A 67 189 68 HOH HOH . E 5 HOH A 68 190 69 HOH HOH . E 5 HOH A 69 191 191 HOH HOH . E 5 HOH A 70 192 70 HOH HOH . E 5 HOH A 71 193 74 HOH HOH . E 5 HOH A 72 194 76 HOH HOH . E 5 HOH A 73 195 195 HOH HOH . E 5 HOH A 74 196 77 HOH HOH . E 5 HOH A 75 197 78 HOH HOH . E 5 HOH A 76 198 198 HOH HOH . E 5 HOH A 77 199 199 HOH HOH . E 5 HOH A 78 200 200 HOH HOH . E 5 HOH A 79 201 80 HOH HOH . E 5 HOH A 80 202 202 HOH HOH . E 5 HOH A 81 203 203 HOH HOH . E 5 HOH A 82 204 204 HOH HOH . E 5 HOH A 83 205 205 HOH HOH . E 5 HOH A 84 206 206 HOH HOH . E 5 HOH A 85 207 207 HOH HOH . E 5 HOH A 86 208 208 HOH HOH . E 5 HOH A 87 209 81 HOH HOH . E 5 HOH A 88 210 83 HOH HOH . E 5 HOH A 89 211 211 HOH HOH . E 5 HOH A 90 212 212 HOH HOH . E 5 HOH A 91 213 84 HOH HOH . E 5 HOH A 92 214 86 HOH HOH . E 5 HOH A 93 215 87 HOH HOH . E 5 HOH A 94 216 216 HOH HOH . E 5 HOH A 95 217 100 HOH HOH . E 5 HOH A 96 218 101 HOH HOH . E 5 HOH A 97 219 219 HOH HOH . E 5 HOH A 98 220 102 HOH HOH . E 5 HOH A 99 221 105 HOH HOH . E 5 HOH A 100 222 106 HOH HOH . E 5 HOH A 101 223 107 HOH HOH . E 5 HOH A 102 224 112 HOH HOH . E 5 HOH A 103 225 114 HOH HOH . E 5 HOH A 104 226 118 HOH HOH . E 5 HOH A 105 257 257 HOH HOH . E 5 HOH A 106 258 258 HOH HOH . E 5 HOH A 107 259 259 HOH HOH . E 5 HOH A 108 262 262 HOH HOH . E 5 HOH A 109 263 263 HOH HOH . E 5 HOH A 110 266 266 HOH HOH . E 5 HOH A 111 268 268 HOH HOH . E 5 HOH A 112 269 269 HOH HOH . E 5 HOH A 113 272 272 HOH HOH . E 5 HOH A 114 273 273 HOH HOH . E 5 HOH A 115 278 278 HOH HOH . E 5 HOH A 116 281 281 HOH HOH . E 5 HOH A 117 282 282 HOH HOH . E 5 HOH A 118 283 283 HOH HOH . E 5 HOH A 119 285 285 HOH HOH . E 5 HOH A 120 288 288 HOH HOH . E 5 HOH A 121 290 290 HOH HOH . E 5 HOH A 122 293 293 HOH HOH . E 5 HOH A 123 295 295 HOH HOH . E 5 HOH A 124 303 303 HOH HOH . E 5 HOH A 125 304 304 HOH HOH . E 5 HOH A 126 305 305 HOH HOH . E 5 HOH A 127 307 307 HOH HOH . E 5 HOH A 128 308 308 HOH HOH . E 5 HOH A 129 313 313 HOH HOH . E 5 HOH A 130 322 322 HOH HOH . E 5 HOH A 131 323 323 HOH HOH . E 5 HOH A 132 324 324 HOH HOH . E 5 HOH A 133 326 326 HOH HOH . E 5 HOH A 134 328 328 HOH HOH . E 5 HOH A 135 329 329 HOH HOH . E 5 HOH A 136 331 331 HOH HOH . E 5 HOH A 137 332 332 HOH HOH . E 5 HOH A 138 334 334 HOH HOH . E 5 HOH A 139 335 335 HOH HOH . E 5 HOH A 140 336 336 HOH HOH . E 5 HOH A 141 337 337 HOH HOH . E 5 HOH A 142 338 338 HOH HOH . E 5 HOH A 143 339 339 HOH HOH . E 5 HOH A 144 340 340 HOH HOH . E 5 HOH A 145 341 341 HOH HOH . E 5 HOH A 146 343 343 HOH HOH . E 5 HOH A 147 344 344 HOH HOH . E 5 HOH A 148 345 345 HOH HOH . E 5 HOH A 149 346 346 HOH HOH . E 5 HOH A 150 348 348 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -4.579 18.298 3.352 1 41.32 ? C1 GOL 121 A 1 HETATM 2 O O1 GOL . . . C 3 -3.403 18.361 4.123 1 40.94 ? O1 GOL 121 A 1 HETATM 3 C C2 GOL . . . C 3 -4.806 16.845 2.977 1 40.65 ? C2 GOL 121 A 1 HETATM 4 O O2 GOL . . . C 3 -5.056 16.099 4.141 1 41.57 ? O2 GOL 121 A 1 HETATM 5 C C3 GOL . . . C 3 -5.934 16.686 1.972 1 39.45 ? C3 GOL 121 A 1 HETATM 6 O O3 GOL . . . C 3 -6.269 15.323 1.924 1 38.53 ? O3 GOL 121 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #