data_3FG5 # _model_server_result.job_id 5bKtxKsUrlPPPBVsLC0IXg _model_server_result.datetime_utc '2025-07-02 19:09:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":134}' # _entry.id 3FG5 # _exptl.entry_id 3FG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.379 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AJMALINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FG5 _cell.length_a 52.949 _cell.length_b 52.949 _cell.length_c 48.445 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 115 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 121 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C18 H22 N2 O2' _chem_comp.formula_weight 298.379 _chem_comp.id AJM _chem_comp.mon_nstd_flag . _chem_comp.name AJMALINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C15 AJM sing 1 n n O1 HO1 AJM sing 2 n n C15 C5 AJM sing 3 n n C15 C14 AJM sing 4 n n C15 H15 AJM sing 5 n n C5 C4 AJM sing 6 n n C5 C6 AJM sing 7 n n C5 C1 AJM sing 8 n n C4 C3 AJM sing 9 n n C4 H41 AJM sing 10 n n C4 H42 AJM sing 11 n n C6 C7 AJM doub 12 n y C6 C11 AJM sing 13 n y C7 C8 AJM sing 14 n y C7 H7 AJM sing 15 n n C8 C9 AJM doub 16 n y C8 H8 AJM sing 17 n n C9 C10 AJM sing 18 n y C9 H9 AJM sing 19 n n C11 C10 AJM doub 20 n y C11 N1 AJM sing 21 n n C10 H10 AJM sing 22 n n C14 C13 AJM sing 23 n n C14 C3 AJM sing 24 n n C14 H14 AJM sing 25 n n C13 C16 AJM sing 26 n n C13 C12 AJM sing 27 n n C13 H13 AJM sing 28 n n C16 C17 AJM sing 29 n n C16 H161 AJM sing 30 n n C16 H162 AJM sing 31 n n C3 N2 AJM sing 32 n n C3 H3 AJM sing 33 n n N2 C17 AJM sing 34 n n N2 C2 AJM sing 35 n n C17 O2 AJM sing 36 n n C17 H17 AJM sing 37 n n O2 HO2 AJM sing 38 n n C2 C12 AJM sing 39 n n C2 C1 AJM sing 40 n n C2 H2 AJM sing 41 n n C12 H121 AJM sing 42 n n C12 H122 AJM sing 43 n n C1 N1 AJM sing 44 n n C1 H1 AJM sing 45 n n N1 C18 AJM sing 46 n n C18 H181 AJM sing 47 n n C18 H182 AJM sing 48 n n C18 H183 AJM sing 49 n n # _atom_sites.entry_id 3FG5 _atom_sites.fract_transf_matrix[1][1] 0.018886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 AJM A 1 134 1 AJM AJM . D 4 HOH A 1 15 15 HOH HOH . D 4 HOH A 2 58 58 HOH HOH . D 4 HOH A 3 60 60 HOH HOH . D 4 HOH A 4 63 63 HOH HOH . D 4 HOH A 5 135 1 HOH HOH . D 4 HOH A 6 136 2 HOH HOH . D 4 HOH A 7 137 3 HOH HOH . D 4 HOH A 8 138 4 HOH HOH . D 4 HOH A 9 139 6 HOH HOH . D 4 HOH A 10 140 7 HOH HOH . D 4 HOH A 11 141 8 HOH HOH . D 4 HOH A 12 142 9 HOH HOH . D 4 HOH A 13 143 10 HOH HOH . D 4 HOH A 14 144 11 HOH HOH . D 4 HOH A 15 145 12 HOH HOH . D 4 HOH A 16 146 13 HOH HOH . D 4 HOH A 17 147 14 HOH HOH . D 4 HOH A 18 148 16 HOH HOH . D 4 HOH A 19 149 17 HOH HOH . D 4 HOH A 20 150 19 HOH HOH . D 4 HOH A 21 151 20 HOH HOH . D 4 HOH A 22 152 21 HOH HOH . D 4 HOH A 23 153 22 HOH HOH . D 4 HOH A 24 154 23 HOH HOH . D 4 HOH A 25 155 25 HOH HOH . D 4 HOH A 26 156 26 HOH HOH . D 4 HOH A 27 157 28 HOH HOH . D 4 HOH A 28 158 31 HOH HOH . D 4 HOH A 29 159 32 HOH HOH . D 4 HOH A 30 160 33 HOH HOH . D 4 HOH A 31 161 34 HOH HOH . D 4 HOH A 32 162 36 HOH HOH . D 4 HOH A 33 163 37 HOH HOH . D 4 HOH A 34 164 39 HOH HOH . D 4 HOH A 35 165 41 HOH HOH . D 4 HOH A 36 166 42 HOH HOH . D 4 HOH A 37 167 49 HOH HOH . D 4 HOH A 38 168 50 HOH HOH . D 4 HOH A 39 169 51 HOH HOH . D 4 HOH A 40 170 52 HOH HOH . D 4 HOH A 41 171 54 HOH HOH . D 4 HOH A 42 172 56 HOH HOH . D 4 HOH A 43 173 59 HOH HOH . D 4 HOH A 44 174 61 HOH HOH . D 4 HOH A 45 175 67 HOH HOH . D 4 HOH A 46 176 68 HOH HOH . D 4 HOH A 47 177 69 HOH HOH . D 4 HOH A 48 178 70 HOH HOH . D 4 HOH A 49 179 71 HOH HOH . D 4 HOH A 50 180 74 HOH HOH . D 4 HOH A 51 181 79 HOH HOH . D 4 HOH A 52 182 80 HOH HOH . D 4 HOH A 53 183 88 HOH HOH . D 4 HOH A 54 184 91 HOH HOH . D 4 HOH A 55 185 92 HOH HOH . D 4 HOH A 56 186 93 HOH HOH . D 4 HOH A 57 187 98 HOH HOH . D 4 HOH A 58 188 101 HOH HOH . D 4 HOH A 59 189 106 HOH HOH . D 4 HOH A 60 190 108 HOH HOH . D 4 HOH A 61 191 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 AJM . . . C 3 -12.19 32.652 8.359 0.5 97.22 ? O1 AJM 134 A 1 HETATM 2 C C15 AJM . . . C 3 -13.331 31.972 8.905 0.5 97.8 ? C15 AJM 134 A 1 HETATM 3 C C5 AJM . . . C 3 -14.673 32.579 8.443 0.5 97.91 ? C5 AJM 134 A 1 HETATM 4 C C4 AJM . . . C 3 -14.827 31.988 7.048 0.5 97.81 ? C4 AJM 134 A 1 HETATM 5 C C6 AJM . . . C 3 -14.879 34.057 8.347 0.5 97.94 ? C6 AJM 134 A 1 HETATM 6 C C7 AJM . . . C 3 -14.028 35.145 8.049 0.5 97.89 ? C7 AJM 134 A 1 HETATM 7 C C8 AJM . . . C 3 -14.584 36.448 8.049 0.5 97.57 ? C8 AJM 134 A 1 HETATM 8 C C9 AJM . . . C 3 -15.937 36.669 8.357 0.5 97.64 ? C9 AJM 134 A 1 HETATM 9 C C11 AJM . . . C 3 -16.277 34.273 8.672 0.5 97.99 ? C11 AJM 134 A 1 HETATM 10 C C10 AJM . . . C 3 -16.812 35.601 8.662 0.5 97.76 ? C10 AJM 134 A 1 HETATM 11 C C14 AJM . . . C 3 -13.417 30.511 8.417 0.5 97.86 ? C14 AJM 134 A 1 HETATM 12 C C13 AJM . . . C 3 -13.792 29.541 9.61 0.5 98.01 ? C13 AJM 134 A 1 HETATM 13 C C16 AJM . . . C 3 -14.261 28.169 9.036 0.5 97.84 ? C16 AJM 134 A 1 HETATM 14 C C3 AJM . . . C 3 -14.579 30.468 7.347 0.5 97.84 ? C3 AJM 134 A 1 HETATM 15 N N2 AJM . . . C 3 -15.818 29.908 8.011 0.5 97.77 ? N2 AJM 134 A 1 HETATM 16 C C17 AJM . . . C 3 -15.55 28.433 8.195 0.5 97.69 ? C17 AJM 134 A 1 HETATM 17 O O2 AJM . . . C 3 -15.357 27.826 6.923 0.5 97.84 ? O2 AJM 134 A 1 HETATM 18 C C2 AJM . . . C 3 -16.061 30.591 9.356 0.5 97.98 ? C2 AJM 134 A 1 HETATM 19 C C12 AJM . . . C 3 -15.03 30.053 10.419 0.5 98.07 ? C12 AJM 134 A 1 HETATM 20 C C1 AJM . . . C 3 -15.856 32.111 9.39 0.5 98 ? C1 AJM 134 A 1 HETATM 21 N N1 AJM . . . C 3 -16.931 33.023 8.939 0.5 98.14 ? N1 AJM 134 A 1 HETATM 22 C C18 AJM . . . C 3 -17.886 33.183 10.057 0.5 97.77 ? C18 AJM 134 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #