data_3FGZ # _model_server_result.job_id IbTpvUSkpgm4AF2goPnZPw _model_server_result.datetime_utc '2024-10-11 12:26:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fgz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 3FGZ # _exptl.entry_id 3FGZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FGZ _cell.length_a 53.534 _cell.length_b 53.485 _cell.length_c 161.853 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FGZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 12 A ASP 13 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc2 A OD1 ASP 56 A ASP 57 1_555 D BE BEF . A BEF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc3 A OD2 ASP 56 A ASP 57 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc4 A O MET 58 A MET 59 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc5 D F1 BEF . A BEF 130 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc6 J O HOH . A HOH 151 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc7 J O HOH . A HOH 192 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc8 B OD1 ASP 12 B ASP 13 1_555 F MN MN . B MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc9 B OD1 ASP 56 B ASP 57 1_555 G BE BEF . B BEF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.744 ? metalc ? metalc10 B OD2 ASP 56 B ASP 57 1_555 F MN MN . B MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc11 B O MET 58 B MET 59 1_555 F MN MN . B MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc12 G F2 BEF . B BEF 130 1_555 F MN MN . B MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc13 K O HOH . B HOH 147 1_555 F MN MN . B MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc14 K O HOH . B HOH 178 1_555 F MN MN . B MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3FGZ _atom_sites.fract_transf_matrix[1][1] 0.01868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 202 202 MN MN . D 3 BEF A 1 130 130 BEF BEF . E 4 GOL A 1 501 501 GOL GOL . F 2 MN B 1 202 202 MN MN . G 3 BEF B 1 130 130 BEF BEF . H 4 GOL B 1 500 500 GOL GOL . I 5 NH4 B 1 502 502 NH4 NH4 . J 6 HOH A 1 131 5 HOH HOH . J 6 HOH A 2 132 132 HOH HOH . J 6 HOH A 3 133 6 HOH HOH . J 6 HOH A 4 134 11 HOH HOH . J 6 HOH A 5 135 12 HOH HOH . J 6 HOH A 6 136 136 HOH HOH . J 6 HOH A 7 137 137 HOH HOH . J 6 HOH A 8 138 138 HOH HOH . J 6 HOH A 9 139 139 HOH HOH . J 6 HOH A 10 140 140 HOH HOH . J 6 HOH A 11 141 141 HOH HOH . J 6 HOH A 12 142 142 HOH HOH . J 6 HOH A 13 143 13 HOH HOH . J 6 HOH A 14 144 144 HOH HOH . J 6 HOH A 15 145 145 HOH HOH . J 6 HOH A 16 146 146 HOH HOH . J 6 HOH A 17 147 15 HOH HOH . J 6 HOH A 18 148 148 HOH HOH . J 6 HOH A 19 149 16 HOH HOH . J 6 HOH A 20 150 17 HOH HOH . J 6 HOH A 21 151 151 HOH HOH . J 6 HOH A 22 152 152 HOH HOH . J 6 HOH A 23 153 20 HOH HOH . J 6 HOH A 24 154 154 HOH HOH . J 6 HOH A 25 155 155 HOH HOH . J 6 HOH A 26 156 156 HOH HOH . J 6 HOH A 27 157 21 HOH HOH . J 6 HOH A 28 158 25 HOH HOH . J 6 HOH A 29 159 26 HOH HOH . J 6 HOH A 30 160 31 HOH HOH . J 6 HOH A 31 161 161 HOH HOH . J 6 HOH A 32 162 32 HOH HOH . J 6 HOH A 33 163 33 HOH HOH . J 6 HOH A 34 164 164 HOH HOH . J 6 HOH A 35 165 36 HOH HOH . J 6 HOH A 36 166 166 HOH HOH . J 6 HOH A 37 167 167 HOH HOH . J 6 HOH A 38 168 37 HOH HOH . J 6 HOH A 39 169 42 HOH HOH . J 6 HOH A 40 170 43 HOH HOH . J 6 HOH A 41 171 171 HOH HOH . J 6 HOH A 42 172 44 HOH HOH . J 6 HOH A 43 173 173 HOH HOH . J 6 HOH A 44 174 174 HOH HOH . J 6 HOH A 45 175 45 HOH HOH . J 6 HOH A 46 176 47 HOH HOH . J 6 HOH A 47 177 48 HOH HOH . J 6 HOH A 48 178 49 HOH HOH . J 6 HOH A 49 179 50 HOH HOH . J 6 HOH A 50 180 180 HOH HOH . J 6 HOH A 51 181 181 HOH HOH . J 6 HOH A 52 182 51 HOH HOH . J 6 HOH A 53 183 183 HOH HOH . J 6 HOH A 54 184 184 HOH HOH . J 6 HOH A 55 185 55 HOH HOH . J 6 HOH A 56 186 186 HOH HOH . J 6 HOH A 57 187 187 HOH HOH . J 6 HOH A 58 188 56 HOH HOH . J 6 HOH A 59 189 58 HOH HOH . J 6 HOH A 60 190 59 HOH HOH . J 6 HOH A 61 191 60 HOH HOH . J 6 HOH A 62 192 63 HOH HOH . J 6 HOH A 63 193 64 HOH HOH . J 6 HOH A 64 194 68 HOH HOH . J 6 HOH A 65 195 69 HOH HOH . J 6 HOH A 66 196 70 HOH HOH . J 6 HOH A 67 197 72 HOH HOH . J 6 HOH A 68 198 75 HOH HOH . J 6 HOH A 69 199 79 HOH HOH . J 6 HOH A 70 200 80 HOH HOH . J 6 HOH A 71 201 81 HOH HOH . J 6 HOH A 72 203 83 HOH HOH . J 6 HOH A 73 204 85 HOH HOH . J 6 HOH A 74 205 86 HOH HOH . J 6 HOH A 75 206 87 HOH HOH . J 6 HOH A 76 207 88 HOH HOH . J 6 HOH A 77 208 94 HOH HOH . J 6 HOH A 78 209 96 HOH HOH . J 6 HOH A 79 210 97 HOH HOH . J 6 HOH A 80 211 103 HOH HOH . J 6 HOH A 81 212 104 HOH HOH . J 6 HOH A 82 213 108 HOH HOH . J 6 HOH A 83 214 110 HOH HOH . J 6 HOH A 84 215 112 HOH HOH . J 6 HOH A 85 216 113 HOH HOH . J 6 HOH A 86 217 115 HOH HOH . J 6 HOH A 87 218 116 HOH HOH . J 6 HOH A 88 219 117 HOH HOH . J 6 HOH A 89 220 119 HOH HOH . J 6 HOH A 90 221 120 HOH HOH . J 6 HOH A 91 222 123 HOH HOH . J 6 HOH A 92 223 124 HOH HOH . J 6 HOH A 93 224 126 HOH HOH . J 6 HOH A 94 225 127 HOH HOH . K 6 HOH B 1 131 131 HOH HOH . K 6 HOH B 2 132 3 HOH HOH . K 6 HOH B 3 133 133 HOH HOH . K 6 HOH B 4 134 134 HOH HOH . K 6 HOH B 5 135 135 HOH HOH . K 6 HOH B 6 136 4 HOH HOH . K 6 HOH B 7 137 7 HOH HOH . K 6 HOH B 8 138 8 HOH HOH . K 6 HOH B 9 139 9 HOH HOH . K 6 HOH B 10 140 10 HOH HOH . K 6 HOH B 11 141 14 HOH HOH . K 6 HOH B 12 142 18 HOH HOH . K 6 HOH B 13 143 143 HOH HOH . K 6 HOH B 14 144 19 HOH HOH . K 6 HOH B 15 145 22 HOH HOH . K 6 HOH B 16 146 23 HOH HOH . K 6 HOH B 17 147 147 HOH HOH . K 6 HOH B 18 148 24 HOH HOH . K 6 HOH B 19 149 149 HOH HOH . K 6 HOH B 20 150 150 HOH HOH . K 6 HOH B 21 151 27 HOH HOH . K 6 HOH B 22 152 28 HOH HOH . K 6 HOH B 23 153 153 HOH HOH . K 6 HOH B 24 154 34 HOH HOH . K 6 HOH B 25 155 35 HOH HOH . K 6 HOH B 26 156 38 HOH HOH . K 6 HOH B 27 157 157 HOH HOH . K 6 HOH B 28 158 158 HOH HOH . K 6 HOH B 29 159 159 HOH HOH . K 6 HOH B 30 160 160 HOH HOH . K 6 HOH B 31 161 39 HOH HOH . K 6 HOH B 32 162 162 HOH HOH . K 6 HOH B 33 163 163 HOH HOH . K 6 HOH B 34 164 40 HOH HOH . K 6 HOH B 35 165 165 HOH HOH . K 6 HOH B 36 166 41 HOH HOH . K 6 HOH B 37 167 46 HOH HOH . K 6 HOH B 38 168 168 HOH HOH . K 6 HOH B 39 169 52 HOH HOH . K 6 HOH B 40 170 53 HOH HOH . K 6 HOH B 41 171 54 HOH HOH . K 6 HOH B 42 172 172 HOH HOH . K 6 HOH B 43 173 57 HOH HOH . K 6 HOH B 44 174 61 HOH HOH . K 6 HOH B 45 175 62 HOH HOH . K 6 HOH B 46 176 67 HOH HOH . K 6 HOH B 47 177 177 HOH HOH . K 6 HOH B 48 178 178 HOH HOH . K 6 HOH B 49 179 179 HOH HOH . K 6 HOH B 50 180 71 HOH HOH . K 6 HOH B 51 181 73 HOH HOH . K 6 HOH B 52 182 182 HOH HOH . K 6 HOH B 53 183 74 HOH HOH . K 6 HOH B 54 184 76 HOH HOH . K 6 HOH B 55 185 185 HOH HOH . K 6 HOH B 56 186 77 HOH HOH . K 6 HOH B 57 187 78 HOH HOH . K 6 HOH B 58 188 82 HOH HOH . K 6 HOH B 59 189 84 HOH HOH . K 6 HOH B 60 190 91 HOH HOH . K 6 HOH B 61 191 92 HOH HOH . K 6 HOH B 62 192 93 HOH HOH . K 6 HOH B 63 193 95 HOH HOH . K 6 HOH B 64 194 98 HOH HOH . K 6 HOH B 65 195 99 HOH HOH . K 6 HOH B 66 196 100 HOH HOH . K 6 HOH B 67 197 105 HOH HOH . K 6 HOH B 68 198 107 HOH HOH . K 6 HOH B 69 199 109 HOH HOH . K 6 HOH B 70 200 111 HOH HOH . K 6 HOH B 71 201 114 HOH HOH . K 6 HOH B 72 203 118 HOH HOH . K 6 HOH B 73 204 121 HOH HOH . K 6 HOH B 74 205 122 HOH HOH . K 6 HOH B 75 206 125 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -9.002 _atom_site.Cartn_y -20.347 _atom_site.Cartn_z 2.928 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #