data_3FH1 # _model_server_result.job_id 3H7hRacgy5_G0O6JLa5jLg _model_server_result.datetime_utc '2024-11-04 22:51:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":131}' # _entry.id 3FH1 # _exptl.entry_id 3FH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FH1 _cell.length_a 45.11 _cell.length_b 45.11 _cell.length_c 136.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 136.6 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 22 A ILE 21 1_555 A N MSE 23 A MSE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C MSE 23 A MSE 22 1_555 A N ARG 24 A ARG 23 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C MSE 23 A MSE 22 1_555 A N ARG 24 A ARG 23 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C TRP 100 A TRP 99 1_555 A N MSE 101 A MSE 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C MSE 101 A MSE 100 1_555 A N ALA 102 A ALA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C LEU 112 A LEU 111 1_555 A N MSE 113 A MSE 112 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale7 A C LEU 112 A LEU 111 1_555 A N MSE 113 A MSE 112 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale8 A C MSE 113 A MSE 112 1_555 A N ARG 114 A ARG 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale9 A C ALA 123 A ALA 122 1_555 A N MSE 124 A MSE 123 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C ALA 123 A ALA 122 1_555 A N MSE 124 A MSE 123 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.334 ? covale ? covale11 A C MSE 124 A MSE 123 1_555 A N GLY 125 A GLY 124 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale12 A C MSE 124 A MSE 123 1_555 A N GLY 125 A GLY 124 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 3FH1 _atom_sites.fract_transf_matrix[1][1] 0.022168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNL A 1 129 1 UNL UNL . C 3 CL A 1 130 2 CL CL . D 4 EDO A 1 131 3 EDO EDO . E 5 HOH A 1 132 4 HOH HOH . E 5 HOH A 2 133 5 HOH HOH . E 5 HOH A 3 134 6 HOH HOH . E 5 HOH A 4 135 7 HOH HOH . E 5 HOH A 5 136 8 HOH HOH . E 5 HOH A 6 137 9 HOH HOH . E 5 HOH A 7 138 10 HOH HOH . E 5 HOH A 8 139 11 HOH HOH . E 5 HOH A 9 140 12 HOH HOH . E 5 HOH A 10 141 13 HOH HOH . E 5 HOH A 11 142 14 HOH HOH . E 5 HOH A 12 143 15 HOH HOH . E 5 HOH A 13 144 16 HOH HOH . E 5 HOH A 14 145 17 HOH HOH . E 5 HOH A 15 146 18 HOH HOH . E 5 HOH A 16 147 19 HOH HOH . E 5 HOH A 17 148 20 HOH HOH . E 5 HOH A 18 149 21 HOH HOH . E 5 HOH A 19 150 22 HOH HOH . E 5 HOH A 20 151 23 HOH HOH . E 5 HOH A 21 152 24 HOH HOH . E 5 HOH A 22 153 25 HOH HOH . E 5 HOH A 23 154 26 HOH HOH . E 5 HOH A 24 155 27 HOH HOH . E 5 HOH A 25 156 28 HOH HOH . E 5 HOH A 26 157 29 HOH HOH . E 5 HOH A 27 158 30 HOH HOH . E 5 HOH A 28 159 31 HOH HOH . E 5 HOH A 29 160 32 HOH HOH . E 5 HOH A 30 161 33 HOH HOH . E 5 HOH A 31 162 34 HOH HOH . E 5 HOH A 32 163 35 HOH HOH . E 5 HOH A 33 164 36 HOH HOH . E 5 HOH A 34 165 37 HOH HOH . E 5 HOH A 35 166 38 HOH HOH . E 5 HOH A 36 167 39 HOH HOH . E 5 HOH A 37 168 40 HOH HOH . E 5 HOH A 38 169 41 HOH HOH . E 5 HOH A 39 170 42 HOH HOH . E 5 HOH A 40 171 43 HOH HOH . E 5 HOH A 41 172 44 HOH HOH . E 5 HOH A 42 173 45 HOH HOH . E 5 HOH A 43 174 46 HOH HOH . E 5 HOH A 44 175 47 HOH HOH . E 5 HOH A 45 176 48 HOH HOH . E 5 HOH A 46 177 49 HOH HOH . E 5 HOH A 47 178 50 HOH HOH . E 5 HOH A 48 179 51 HOH HOH . E 5 HOH A 49 180 52 HOH HOH . E 5 HOH A 50 181 53 HOH HOH . E 5 HOH A 51 182 54 HOH HOH . E 5 HOH A 52 183 55 HOH HOH . E 5 HOH A 53 184 56 HOH HOH . E 5 HOH A 54 185 57 HOH HOH . E 5 HOH A 55 186 58 HOH HOH . E 5 HOH A 56 187 59 HOH HOH . E 5 HOH A 57 188 60 HOH HOH . E 5 HOH A 58 189 61 HOH HOH . E 5 HOH A 59 190 62 HOH HOH . E 5 HOH A 60 191 63 HOH HOH . E 5 HOH A 61 192 64 HOH HOH . E 5 HOH A 62 193 65 HOH HOH . E 5 HOH A 63 194 66 HOH HOH . E 5 HOH A 64 195 67 HOH HOH . E 5 HOH A 65 196 68 HOH HOH . E 5 HOH A 66 197 69 HOH HOH . E 5 HOH A 67 198 70 HOH HOH . E 5 HOH A 68 199 71 HOH HOH . E 5 HOH A 69 200 72 HOH HOH . E 5 HOH A 70 201 73 HOH HOH . E 5 HOH A 71 202 74 HOH HOH . E 5 HOH A 72 203 75 HOH HOH . E 5 HOH A 73 204 76 HOH HOH . E 5 HOH A 74 205 77 HOH HOH . E 5 HOH A 75 206 78 HOH HOH . E 5 HOH A 76 207 79 HOH HOH . E 5 HOH A 77 208 80 HOH HOH . E 5 HOH A 78 209 81 HOH HOH . E 5 HOH A 79 210 82 HOH HOH . E 5 HOH A 80 211 83 HOH HOH . E 5 HOH A 81 212 84 HOH HOH . E 5 HOH A 82 213 85 HOH HOH . E 5 HOH A 83 214 86 HOH HOH . E 5 HOH A 84 215 87 HOH HOH . E 5 HOH A 85 216 88 HOH HOH . E 5 HOH A 86 217 89 HOH HOH . E 5 HOH A 87 218 90 HOH HOH . E 5 HOH A 88 219 91 HOH HOH . E 5 HOH A 89 220 92 HOH HOH . E 5 HOH A 90 221 93 HOH HOH . E 5 HOH A 91 222 94 HOH HOH . E 5 HOH A 92 223 95 HOH HOH . E 5 HOH A 93 224 96 HOH HOH . E 5 HOH A 94 225 97 HOH HOH . E 5 HOH A 95 226 98 HOH HOH . E 5 HOH A 96 227 99 HOH HOH . E 5 HOH A 97 228 100 HOH HOH . E 5 HOH A 98 229 101 HOH HOH . E 5 HOH A 99 230 102 HOH HOH . E 5 HOH A 100 231 103 HOH HOH . E 5 HOH A 101 232 104 HOH HOH . E 5 HOH A 102 233 105 HOH HOH . E 5 HOH A 103 234 106 HOH HOH . E 5 HOH A 104 235 107 HOH HOH . E 5 HOH A 105 236 108 HOH HOH . E 5 HOH A 106 237 109 HOH HOH . E 5 HOH A 107 238 110 HOH HOH . E 5 HOH A 108 239 111 HOH HOH . E 5 HOH A 109 240 112 HOH HOH . E 5 HOH A 110 241 113 HOH HOH . E 5 HOH A 111 242 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 13.168 3.323 44.101 1 40.72 ? C1 EDO 131 A 1 HETATM 2 O O1 EDO . . . D 4 12.715 3.148 45.476 1 31.86 ? O1 EDO 131 A 1 HETATM 3 C C2 EDO . . . D 4 12.92 2.071 43.287 1 38.94 ? C2 EDO 131 A 1 HETATM 4 O O2 EDO . . . D 4 13.396 0.904 43.999 1 41.23 ? O2 EDO 131 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #