data_3FHH # _model_server_result.job_id POkTQKWcvR6xO-E5q0VTbg _model_server_result.datetime_utc '2024-11-04 23:08:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fhh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":641}' # _entry.id 3FHH # _exptl.entry_id 3FHH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FHH _cell.length_a 78.099 _cell.length_b 114.217 _cell.length_c 117.085 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FHH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 70 n n C1 C2 BOG sing 71 n n C1 O5 BOG sing 72 n n C1 H1 BOG sing 73 n n O1 C1' BOG sing 74 n n C2 O2 BOG sing 75 n n C2 C3 BOG sing 76 n n C2 H2 BOG sing 77 n n O2 HO2 BOG sing 78 n n C3 O3 BOG sing 79 n n C3 C4 BOG sing 80 n n C3 H3 BOG sing 81 n n O3 HO3 BOG sing 82 n n C4 O4 BOG sing 83 n n C4 C5 BOG sing 84 n n C4 H4 BOG sing 85 n n O4 HO4 BOG sing 86 n n C5 O5 BOG sing 87 n n C5 C6 BOG sing 88 n n C5 H5 BOG sing 89 n n C6 O6 BOG sing 90 n n C6 H61 BOG sing 91 n n C6 H62 BOG sing 92 n n O6 HO6 BOG sing 93 n n C1' C2' BOG sing 94 n n C1' "H1'1" BOG sing 95 n n C1' "H1'2" BOG sing 96 n n C2' C3' BOG sing 97 n n C2' "H2'1" BOG sing 98 n n C2' "H2'2" BOG sing 99 n n C3' C4' BOG sing 100 n n C3' "H3'1" BOG sing 101 n n C3' "H3'2" BOG sing 102 n n C4' C5' BOG sing 103 n n C4' "H4'1" BOG sing 104 n n C4' "H4'2" BOG sing 105 n n C5' C6' BOG sing 106 n n C5' "H5'1" BOG sing 107 n n C5' "H5'2" BOG sing 108 n n C6' C7' BOG sing 109 n n C6' "H6'1" BOG sing 110 n n C6' "H6'2" BOG sing 111 n n C7' C8' BOG sing 112 n n C7' "H7'1" BOG sing 113 n n C7' "H7'2" BOG sing 114 n n C8' "H8'1" BOG sing 115 n n C8' "H8'2" BOG sing 116 n n C8' "H8'3" BOG sing 117 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3FHH _atom_sites.fract_transf_matrix[1][1] 0.012804 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008755 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008541 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 641 641 BOG BOG . C 3 PB A 1 642 642 PB PB . D 3 PB A 1 643 643 PB PB . E 3 PB A 1 644 644 PB PB . F 3 PB A 1 645 645 PB PB . G 4 HOH A 1 646 646 HOH HOH . G 4 HOH A 2 647 647 HOH HOH . G 4 HOH A 3 648 648 HOH HOH . G 4 HOH A 4 649 649 HOH HOH . G 4 HOH A 5 650 650 HOH HOH . G 4 HOH A 6 651 651 HOH HOH . G 4 HOH A 7 652 652 HOH HOH . G 4 HOH A 8 653 653 HOH HOH . G 4 HOH A 9 654 654 HOH HOH . G 4 HOH A 10 655 655 HOH HOH . G 4 HOH A 11 656 656 HOH HOH . G 4 HOH A 12 657 657 HOH HOH . G 4 HOH A 13 658 658 HOH HOH . G 4 HOH A 14 659 659 HOH HOH . G 4 HOH A 15 660 660 HOH HOH . G 4 HOH A 16 661 661 HOH HOH . G 4 HOH A 17 662 662 HOH HOH . G 4 HOH A 18 663 663 HOH HOH . G 4 HOH A 19 664 664 HOH HOH . G 4 HOH A 20 665 665 HOH HOH . G 4 HOH A 21 666 666 HOH HOH . G 4 HOH A 22 667 667 HOH HOH . G 4 HOH A 23 668 668 HOH HOH . G 4 HOH A 24 669 669 HOH HOH . G 4 HOH A 25 670 670 HOH HOH . G 4 HOH A 26 671 671 HOH HOH . G 4 HOH A 27 672 672 HOH HOH . G 4 HOH A 28 673 673 HOH HOH . G 4 HOH A 29 674 674 HOH HOH . G 4 HOH A 30 675 675 HOH HOH . G 4 HOH A 31 676 676 HOH HOH . G 4 HOH A 32 677 677 HOH HOH . G 4 HOH A 33 678 678 HOH HOH . G 4 HOH A 34 679 679 HOH HOH . G 4 HOH A 35 680 680 HOH HOH . G 4 HOH A 36 681 681 HOH HOH . G 4 HOH A 37 682 682 HOH HOH . G 4 HOH A 38 683 683 HOH HOH . G 4 HOH A 39 684 684 HOH HOH . G 4 HOH A 40 685 685 HOH HOH . G 4 HOH A 41 686 686 HOH HOH . G 4 HOH A 42 687 687 HOH HOH . G 4 HOH A 43 688 688 HOH HOH . G 4 HOH A 44 689 689 HOH HOH . G 4 HOH A 45 690 690 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . B 2 -6.041 47.832 65.462 1 110.51 ? C1 BOG 641 A 1 HETATM 2 O O1 BOG . . . B 2 -5.567 48.701 64.435 1 108.72 ? O1 BOG 641 A 1 HETATM 3 C C2 BOG . . . B 2 -6.613 46.589 64.794 1 108.93 ? C2 BOG 641 A 1 HETATM 4 O O2 BOG . . . B 2 -7.659 46.951 63.888 1 108.41 ? O2 BOG 641 A 1 HETATM 5 C C3 BOG . . . B 2 -7.109 45.601 65.841 1 110.69 ? C3 BOG 641 A 1 HETATM 6 O O3 BOG . . . B 2 -7.607 44.428 65.179 1 108.81 ? O3 BOG 641 A 1 HETATM 7 C C4 BOG . . . B 2 -5.943 45.257 66.778 1 111.94 ? C4 BOG 641 A 1 HETATM 8 O O4 BOG . . . B 2 -6.357 44.327 67.789 1 112.86 ? O4 BOG 641 A 1 HETATM 9 C C5 BOG . . . B 2 -5.359 46.545 67.389 1 113.64 ? C5 BOG 641 A 1 HETATM 10 O O5 BOG . . . B 2 -4.973 47.45 66.34 1 111.74 ? O5 BOG 641 A 1 HETATM 11 C C6 BOG . . . B 2 -4.182 46.333 68.36 1 115.29 ? C6 BOG 641 A 1 HETATM 12 O O6 BOG . . . B 2 -3.361 45.201 68.027 1 113.88 ? O6 BOG 641 A 1 HETATM 13 C C1' BOG . . . B 2 -5.289 50.016 64.919 1 110.42 ? C1' BOG 641 A 1 HETATM 14 C C2' BOG . . . B 2 -5.99 51.063 64.055 1 109.84 ? C2' BOG 641 A 1 HETATM 15 C C3' BOG . . . B 2 -5.032 51.772 63.098 1 107.66 ? C3' BOG 641 A 1 HETATM 16 C C4' BOG . . . B 2 -4.042 52.687 63.818 1 108.12 ? C4' BOG 641 A 1 HETATM 17 C C5' BOG . . . B 2 -2.929 53.129 62.874 1 105.89 ? C5' BOG 641 A 1 HETATM 18 C C6' BOG . . . B 2 -3.199 54.513 62.294 1 105.06 ? C6' BOG 641 A 1 HETATM 19 C C7' BOG . . . B 2 -1.878 55.238 62.077 1 105.31 ? C7' BOG 641 A 1 HETATM 20 C C8' BOG . . . B 2 -1.904 56.023 60.78 1 104.08 ? C8' BOG 641 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #