data_3FHJ # _model_server_result.job_id SexE-rr4dSqdgFE2ZCNPHA _model_server_result.datetime_utc '2025-02-27 19:10:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1003}' # _entry.id 3FHJ # _exptl.entry_id 3FHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.221 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ADENOSINE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 134.01 _cell.angle_gamma 90 _cell.entry_id 3FHJ _cell.length_a 223.606 _cell.length_b 91.989 _cell.length_c 158.322 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G,H,I,M,N,O 1 1 B,D,J,K,L,P,Q,R 2 1 E,F,S,T,U,V,W,X 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 L N N ? 4 O N N ? 4 R N N ? 4 U N N ? 4 X N N # _chem_comp.formula 'C10 H14 N5 O7 P' _chem_comp.formula_weight 347.221 _chem_comp.id AMP _chem_comp.mon_nstd_flag . _chem_comp.name 'ADENOSINE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P AMP doub 13 n n P O2P AMP sing 14 n n P O3P AMP sing 15 n n P O5' AMP sing 16 n n O2P HOP2 AMP sing 17 n n O3P HOP3 AMP sing 18 n n O5' C5' AMP sing 19 n n C5' C4' AMP sing 20 n n C5' "H5'1" AMP sing 21 n n C5' "H5'2" AMP sing 22 n n C4' O4' AMP sing 23 n n C4' C3' AMP sing 24 n n C4' H4' AMP sing 25 n n O4' C1' AMP sing 26 n n C3' O3' AMP sing 27 n n C3' C2' AMP sing 28 n n C3' H3' AMP sing 29 n n O3' HO3' AMP sing 30 n n C2' O2' AMP sing 31 n n C2' C1' AMP sing 32 n n C2' H2' AMP sing 33 n n O2' HO2' AMP sing 34 n n C1' N9 AMP sing 35 n n C1' H1' AMP sing 36 n n N9 C8 AMP sing 37 n y N9 C4 AMP sing 38 n y C8 N7 AMP doub 39 n y C8 H8 AMP sing 40 n n N7 C5 AMP sing 41 n y C5 C6 AMP sing 42 n y C5 C4 AMP doub 43 n y C6 N6 AMP sing 44 n n C6 N1 AMP doub 45 n y N6 HN61 AMP sing 46 n n N6 HN62 AMP sing 47 n n N1 C2 AMP sing 48 n y C2 N3 AMP doub 49 n y C2 H2 AMP sing 50 n n N3 C4 AMP sing 51 n y # _atom_sites.entry_id 3FHJ _atom_sites.fract_transf_matrix[1][1] 0.004472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00432 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010871 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 TRP A 1 1001 1001 TRP TRP . H 3 PO4 A 1 1002 1002 PO4 PO4 . I 4 AMP A 1 1003 1003 AMP AMP . J 2 TRP D 1 1001 1001 TRP TRP . K 3 PO4 D 1 1002 1002 PO4 PO4 . L 4 AMP D 1 1003 1003 AMP AMP . M 2 TRP B 1 1001 1001 TRP TRP . N 3 PO4 B 1 1002 1002 PO4 PO4 . O 4 AMP B 1 1003 1003 AMP AMP . P 2 TRP C 1 1001 1001 TRP TRP . Q 3 PO4 C 1 1002 1002 PO4 PO4 . R 4 AMP C 1 1003 1003 AMP AMP . S 2 TRP E 1 1001 1001 TRP TRP . T 3 PO4 E 1 1002 1002 PO4 PO4 . U 4 AMP E 1 1003 1003 AMP AMP . V 2 TRP F 1 1001 1001 TRP TRP . W 3 PO4 F 1 1002 1002 PO4 PO4 . X 4 AMP F 1 1003 1003 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P AMP . . . I 4 -52.309 -8.096 -69.201 0.33 54.65 ? P AMP 1003 A 1 HETATM 2 O O1P AMP . . . I 4 -53.451 -9.002 -68.773 0.33 56.05 ? O1P AMP 1003 A 1 HETATM 3 O O2P AMP . . . I 4 -52.623 -6.662 -68.809 0.33 55.96 ? O2P AMP 1003 A 1 HETATM 4 O O3P AMP . . . I 4 -51.02 -8.541 -68.52 0.33 54.27 ? O3P AMP 1003 A 1 HETATM 5 O O5' AMP . . . I 4 -52.163 -8.192 -70.802 0.33 52.45 ? O5' AMP 1003 A 1 HETATM 6 C C5' AMP . . . I 4 -53.234 -8.839 -71.489 0.33 49.88 ? C5' AMP 1003 A 1 HETATM 7 C C4' AMP . . . I 4 -53.087 -8.618 -72.995 0.33 47.13 ? C4' AMP 1003 A 1 HETATM 8 O O4' AMP . . . I 4 -53.99 -9.507 -73.699 0.33 48.13 ? O4' AMP 1003 A 1 HETATM 9 C C3' AMP . . . I 4 -53.563 -7.238 -73.425 0.33 48.56 ? C3' AMP 1003 A 1 HETATM 10 O O3' AMP . . . I 4 -53.287 -6.974 -74.801 0.33 47.03 ? O3' AMP 1003 A 1 HETATM 11 C C2' AMP . . . I 4 -55.049 -7.422 -73.151 0.33 47.49 ? C2' AMP 1003 A 1 HETATM 12 O O2' AMP . . . I 4 -55.776 -6.39 -73.849 0.33 45.37 ? O2' AMP 1003 A 1 HETATM 13 C C1' AMP . . . I 4 -55.284 -8.83 -73.735 0.33 47.01 ? C1' AMP 1003 A 1 HETATM 14 N N9 AMP . . . I 4 -56.231 -9.612 -72.961 0.33 48.03 ? N9 AMP 1003 A 1 HETATM 15 C C8 AMP . . . I 4 -56.036 -10.179 -71.732 0.33 44.46 ? C8 AMP 1003 A 1 HETATM 16 N N7 AMP . . . I 4 -57.107 -10.817 -71.307 0.33 49.16 ? N7 AMP 1003 A 1 HETATM 17 C C5 AMP . . . I 4 -58.037 -10.66 -72.315 0.33 46.68 ? C5 AMP 1003 A 1 HETATM 18 C C6 AMP . . . I 4 -59.367 -11.107 -72.463 0.33 45.12 ? C6 AMP 1003 A 1 HETATM 19 N N6 AMP . . . I 4 -60.02 -11.856 -71.513 0.33 41.04 ? N6 AMP 1003 A 1 HETATM 20 N N1 AMP . . . I 4 -60.031 -10.779 -73.603 0.33 42.59 ? N1 AMP 1003 A 1 HETATM 21 C C2 AMP . . . I 4 -59.387 -10.041 -74.539 0.33 43.03 ? C2 AMP 1003 A 1 HETATM 22 N N3 AMP . . . I 4 -58.122 -9.557 -74.496 0.33 44.3 ? N3 AMP 1003 A 1 HETATM 23 C C4 AMP . . . I 4 -57.509 -9.911 -73.353 0.33 46.73 ? C4 AMP 1003 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #