data_3FI2 # _model_server_result.job_id fNVEsTWMeL519wqpbBATUA _model_server_result.datetime_utc '2025-04-15 20:32:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fi2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 3FI2 # _exptl.entry_id 3FI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FI2 _cell.length_a 82.694 _cell.length_b 124.525 _cell.length_c 69.012 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 78 A LYS 116 1_555 A N OCY 79 A OCY 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C OCY 79 A OCY 117 1_555 A N VAL 80 A VAL 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C ASP 162 A ASP 200 1_555 A N OCY 163 A OCY 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.288 ? covale ? covale4 A C OCY 163 A OCY 201 1_555 A N THR 164 A THR 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3FI2 _atom_sites.fract_transf_matrix[1][1] 0.012093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JK1 A 1 600 600 JK1 JK1 . C 3 EDO A 1 601 601 EDO EDO . D 4 HOH A 1 1 1 HOH HOH . D 4 HOH A 2 2 2 HOH HOH . D 4 HOH A 3 3 3 HOH HOH . D 4 HOH A 4 4 4 HOH HOH . D 4 HOH A 5 5 5 HOH HOH . D 4 HOH A 6 6 6 HOH HOH . D 4 HOH A 7 7 7 HOH HOH . D 4 HOH A 8 8 8 HOH HOH . D 4 HOH A 9 9 9 HOH HOH . D 4 HOH A 10 10 10 HOH HOH . D 4 HOH A 11 11 11 HOH HOH . D 4 HOH A 12 12 12 HOH HOH . D 4 HOH A 13 13 13 HOH HOH . D 4 HOH A 14 14 14 HOH HOH . D 4 HOH A 15 15 15 HOH HOH . D 4 HOH A 16 16 16 HOH HOH . D 4 HOH A 17 17 17 HOH HOH . D 4 HOH A 18 18 18 HOH HOH . D 4 HOH A 19 19 19 HOH HOH . D 4 HOH A 20 20 20 HOH HOH . D 4 HOH A 21 21 21 HOH HOH . D 4 HOH A 22 22 22 HOH HOH . D 4 HOH A 23 23 23 HOH HOH . D 4 HOH A 24 24 24 HOH HOH . D 4 HOH A 25 25 25 HOH HOH . D 4 HOH A 26 26 26 HOH HOH . D 4 HOH A 27 27 27 HOH HOH . D 4 HOH A 28 28 28 HOH HOH . D 4 HOH A 29 29 29 HOH HOH . D 4 HOH A 30 30 30 HOH HOH . D 4 HOH A 31 31 31 HOH HOH . D 4 HOH A 32 32 32 HOH HOH . D 4 HOH A 33 33 33 HOH HOH . D 4 HOH A 34 34 34 HOH HOH . D 4 HOH A 35 35 35 HOH HOH . D 4 HOH A 36 36 36 HOH HOH . D 4 HOH A 37 37 37 HOH HOH . D 4 HOH A 38 38 38 HOH HOH . D 4 HOH A 39 506 39 HOH HOH . D 4 HOH A 40 507 40 HOH HOH . D 4 HOH A 41 508 41 HOH HOH . D 4 HOH A 42 509 42 HOH HOH . D 4 HOH A 43 510 43 HOH HOH . D 4 HOH A 44 511 44 HOH HOH . D 4 HOH A 45 512 45 HOH HOH . D 4 HOH A 46 513 46 HOH HOH . D 4 HOH A 47 514 47 HOH HOH . D 4 HOH A 48 515 48 HOH HOH . D 4 HOH A 49 516 49 HOH HOH . D 4 HOH A 50 517 50 HOH HOH . D 4 HOH A 51 518 51 HOH HOH . D 4 HOH A 52 519 52 HOH HOH . D 4 HOH A 53 520 53 HOH HOH . D 4 HOH A 54 521 54 HOH HOH . D 4 HOH A 55 522 55 HOH HOH . D 4 HOH A 56 523 56 HOH HOH . D 4 HOH A 57 524 57 HOH HOH . D 4 HOH A 58 525 58 HOH HOH . D 4 HOH A 59 526 59 HOH HOH . D 4 HOH A 60 527 60 HOH HOH . D 4 HOH A 61 528 61 HOH HOH . D 4 HOH A 62 529 62 HOH HOH . D 4 HOH A 63 530 63 HOH HOH . D 4 HOH A 64 531 64 HOH HOH . D 4 HOH A 65 532 65 HOH HOH . D 4 HOH A 66 533 66 HOH HOH . D 4 HOH A 67 534 67 HOH HOH . D 4 HOH A 68 535 68 HOH HOH . D 4 HOH A 69 536 69 HOH HOH . D 4 HOH A 70 537 70 HOH HOH . D 4 HOH A 71 538 71 HOH HOH . D 4 HOH A 72 539 72 HOH HOH . D 4 HOH A 73 540 73 HOH HOH . D 4 HOH A 74 541 74 HOH HOH . D 4 HOH A 75 542 75 HOH HOH . D 4 HOH A 76 543 76 HOH HOH . D 4 HOH A 77 544 77 HOH HOH . D 4 HOH A 78 545 78 HOH HOH . D 4 HOH A 79 546 79 HOH HOH . D 4 HOH A 80 547 80 HOH HOH . D 4 HOH A 81 548 81 HOH HOH . D 4 HOH A 82 549 82 HOH HOH . D 4 HOH A 83 550 83 HOH HOH . D 4 HOH A 84 551 84 HOH HOH . D 4 HOH A 85 552 85 HOH HOH . D 4 HOH A 86 553 86 HOH HOH . D 4 HOH A 87 554 87 HOH HOH . D 4 HOH A 88 555 88 HOH HOH . D 4 HOH A 89 556 89 HOH HOH . D 4 HOH A 90 557 90 HOH HOH . D 4 HOH A 91 558 91 HOH HOH . D 4 HOH A 92 559 92 HOH HOH . D 4 HOH A 93 560 93 HOH HOH . D 4 HOH A 94 561 94 HOH HOH . D 4 HOH A 95 562 95 HOH HOH . D 4 HOH A 96 563 96 HOH HOH . D 4 HOH A 97 564 97 HOH HOH . D 4 HOH A 98 565 98 HOH HOH . D 4 HOH A 99 566 99 HOH HOH . D 4 HOH A 100 567 100 HOH HOH . D 4 HOH A 101 568 101 HOH HOH . D 4 HOH A 102 569 102 HOH HOH . D 4 HOH A 103 570 103 HOH HOH . D 4 HOH A 104 571 104 HOH HOH . D 4 HOH A 105 572 105 HOH HOH . D 4 HOH A 106 573 106 HOH HOH . D 4 HOH A 107 574 107 HOH HOH . D 4 HOH A 108 575 108 HOH HOH . D 4 HOH A 109 576 109 HOH HOH . D 4 HOH A 110 577 110 HOH HOH . D 4 HOH A 111 578 111 HOH HOH . D 4 HOH A 112 579 112 HOH HOH . D 4 HOH A 113 580 113 HOH HOH . D 4 HOH A 114 581 114 HOH HOH . D 4 HOH A 115 582 115 HOH HOH . D 4 HOH A 116 583 116 HOH HOH . D 4 HOH A 117 584 117 HOH HOH . D 4 HOH A 118 585 118 HOH HOH . D 4 HOH A 119 586 119 HOH HOH . D 4 HOH A 120 587 120 HOH HOH . D 4 HOH A 121 588 121 HOH HOH . D 4 HOH A 122 589 122 HOH HOH . D 4 HOH A 123 590 123 HOH HOH . D 4 HOH A 124 591 124 HOH HOH . D 4 HOH A 125 592 125 HOH HOH . D 4 HOH A 126 593 126 HOH HOH . D 4 HOH A 127 594 127 HOH HOH . D 4 HOH A 128 595 128 HOH HOH . D 4 HOH A 129 596 129 HOH HOH . D 4 HOH A 130 597 130 HOH HOH . D 4 HOH A 131 598 131 HOH HOH . D 4 HOH A 132 599 132 HOH HOH . D 4 HOH A 133 602 133 HOH HOH . D 4 HOH A 134 603 134 HOH HOH . D 4 HOH A 135 604 135 HOH HOH . D 4 HOH A 136 605 136 HOH HOH . D 4 HOH A 137 606 137 HOH HOH . D 4 HOH A 138 607 138 HOH HOH . D 4 HOH A 139 608 139 HOH HOH . D 4 HOH A 140 609 140 HOH HOH . D 4 HOH A 141 610 141 HOH HOH . D 4 HOH A 142 611 142 HOH HOH . D 4 HOH A 143 612 143 HOH HOH . D 4 HOH A 144 613 144 HOH HOH . D 4 HOH A 145 614 145 HOH HOH . D 4 HOH A 146 615 146 HOH HOH . D 4 HOH A 147 616 147 HOH HOH . D 4 HOH A 148 617 148 HOH HOH . D 4 HOH A 149 618 149 HOH HOH . D 4 HOH A 150 619 150 HOH HOH . D 4 HOH A 151 620 151 HOH HOH . D 4 HOH A 152 621 152 HOH HOH . D 4 HOH A 153 622 153 HOH HOH . D 4 HOH A 154 623 154 HOH HOH . D 4 HOH A 155 624 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 35.865 0.421 -0.235 1 19.55 ? C1 EDO 601 A 1 HETATM 2 O O1 EDO . . . C 3 35.771 -0.89 0.334 1 39.26 ? O1 EDO 601 A 1 HETATM 3 C C2 EDO . . . C 3 37.291 0.938 -0.086 1 37.46 ? C2 EDO 601 A 1 HETATM 4 O O2 EDO . . . C 3 38.19 -0.169 0.036 1 43.14 ? O2 EDO 601 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #