data_3FI8 # _model_server_result.job_id 6a6Z2cV-eN7QbFkPJac6xA _model_server_result.datetime_utc '2025-01-10 14:42:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fi8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":442}' # _entry.id 3FI8 # _exptl.entry_id 3FI8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 141.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FI8 _cell.length_a 58.38 _cell.length_b 64.556 _cell.length_c 91.557 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FI8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O3A ADP . A ADP 1 1_555 C MG MG . A MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc2 F O HOH . A HOH 19 1_555 C MG MG . A MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc3 A OD1 ASN 215 A ASN 293 1_555 C MG MG . A MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 A OD2 ASP 227 A ASP 305 1_555 C MG MG . A MG 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? # _chem_comp.formula 'C2 H8 N O4 P' _chem_comp.formula_weight 141.063 _chem_comp.id OPE _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'COLAMINE PHOSPHORIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB OPE sing 281 n n CA O4 OPE sing 282 n n CA HA1 OPE sing 283 n n CA HA2 OPE sing 284 n n CB N OPE sing 285 n n CB HB1 OPE sing 286 n n CB HB2 OPE sing 287 n n O1 P OPE sing 288 n n O1 HO1 OPE sing 289 n n O2 P OPE sing 290 n n O2 HO2 OPE sing 291 n n O3 P OPE doub 292 n n O4 P OPE sing 293 n n N HN1 OPE sing 294 n n N HN2 OPE sing 295 n n # _atom_sites.entry_id 3FI8 _atom_sites.fract_transf_matrix[1][1] 0.017129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 1 1 ADP ADP . C 3 MG A 1 441 1 MG MG . D 4 OPE A 1 603 603 OPE OPE . E 4 OPE A 1 442 603 OPE OPE . F 5 HOH A 1 2 2 HOH HOH . F 5 HOH A 2 3 3 HOH HOH . F 5 HOH A 3 4 4 HOH HOH . F 5 HOH A 4 5 5 HOH HOH . F 5 HOH A 5 6 6 HOH HOH . F 5 HOH A 6 7 7 HOH HOH . F 5 HOH A 7 8 8 HOH HOH . F 5 HOH A 8 9 9 HOH HOH . F 5 HOH A 9 10 10 HOH HOH . F 5 HOH A 10 11 11 HOH HOH . F 5 HOH A 11 12 12 HOH HOH . F 5 HOH A 12 13 13 HOH HOH . F 5 HOH A 13 14 14 HOH HOH . F 5 HOH A 14 15 15 HOH HOH . F 5 HOH A 15 16 16 HOH HOH . F 5 HOH A 16 17 17 HOH HOH . F 5 HOH A 17 18 18 HOH HOH . F 5 HOH A 18 19 19 HOH HOH . F 5 HOH A 19 20 20 HOH HOH . F 5 HOH A 20 21 21 HOH HOH . F 5 HOH A 21 22 22 HOH HOH . F 5 HOH A 22 23 23 HOH HOH . F 5 HOH A 23 24 24 HOH HOH . F 5 HOH A 24 25 25 HOH HOH . F 5 HOH A 25 26 26 HOH HOH . F 5 HOH A 26 27 27 HOH HOH . F 5 HOH A 27 28 28 HOH HOH . F 5 HOH A 28 29 29 HOH HOH . F 5 HOH A 29 30 30 HOH HOH . F 5 HOH A 30 31 31 HOH HOH . F 5 HOH A 31 32 32 HOH HOH . F 5 HOH A 32 33 33 HOH HOH . F 5 HOH A 33 34 34 HOH HOH . F 5 HOH A 34 35 35 HOH HOH . F 5 HOH A 35 36 36 HOH HOH . F 5 HOH A 36 37 37 HOH HOH . F 5 HOH A 37 38 38 HOH HOH . F 5 HOH A 38 39 39 HOH HOH . F 5 HOH A 39 40 40 HOH HOH . F 5 HOH A 40 42 42 HOH HOH . F 5 HOH A 41 43 43 HOH HOH . F 5 HOH A 42 44 44 HOH HOH . F 5 HOH A 43 45 45 HOH HOH . F 5 HOH A 44 46 46 HOH HOH . F 5 HOH A 45 47 47 HOH HOH . F 5 HOH A 46 48 48 HOH HOH . F 5 HOH A 47 49 49 HOH HOH . F 5 HOH A 48 50 50 HOH HOH . F 5 HOH A 49 51 51 HOH HOH . F 5 HOH A 50 52 52 HOH HOH . F 5 HOH A 51 53 53 HOH HOH . F 5 HOH A 52 55 55 HOH HOH . F 5 HOH A 53 56 56 HOH HOH . F 5 HOH A 54 57 57 HOH HOH . F 5 HOH A 55 58 58 HOH HOH . F 5 HOH A 56 59 59 HOH HOH . F 5 HOH A 57 60 60 HOH HOH . F 5 HOH A 58 61 61 HOH HOH . F 5 HOH A 59 62 62 HOH HOH . F 5 HOH A 60 63 63 HOH HOH . F 5 HOH A 61 65 65 HOH HOH . F 5 HOH A 62 66 66 HOH HOH . F 5 HOH A 63 67 67 HOH HOH . F 5 HOH A 64 68 68 HOH HOH . F 5 HOH A 65 69 69 HOH HOH . F 5 HOH A 66 70 70 HOH HOH . F 5 HOH A 67 71 71 HOH HOH . F 5 HOH A 68 72 72 HOH HOH . F 5 HOH A 69 73 73 HOH HOH . F 5 HOH A 70 74 74 HOH HOH . F 5 HOH A 71 75 75 HOH HOH . F 5 HOH A 72 76 76 HOH HOH . F 5 HOH A 73 77 77 HOH HOH . F 5 HOH A 74 78 78 HOH HOH . F 5 HOH A 75 443 1 HOH HOH . F 5 HOH A 76 444 79 HOH HOH . F 5 HOH A 77 445 80 HOH HOH . F 5 HOH A 78 446 81 HOH HOH . F 5 HOH A 79 447 82 HOH HOH . F 5 HOH A 80 448 83 HOH HOH . F 5 HOH A 81 449 84 HOH HOH . F 5 HOH A 82 450 85 HOH HOH . F 5 HOH A 83 451 86 HOH HOH . F 5 HOH A 84 452 87 HOH HOH . F 5 HOH A 85 453 88 HOH HOH . F 5 HOH A 86 454 89 HOH HOH . F 5 HOH A 87 455 90 HOH HOH . F 5 HOH A 88 456 91 HOH HOH . F 5 HOH A 89 457 92 HOH HOH . F 5 HOH A 90 458 93 HOH HOH . F 5 HOH A 91 459 94 HOH HOH . F 5 HOH A 92 460 95 HOH HOH . F 5 HOH A 93 461 96 HOH HOH . F 5 HOH A 94 462 97 HOH HOH . F 5 HOH A 95 463 98 HOH HOH . F 5 HOH A 96 464 99 HOH HOH . F 5 HOH A 97 465 100 HOH HOH . F 5 HOH A 98 466 101 HOH HOH . F 5 HOH A 99 467 102 HOH HOH . F 5 HOH A 100 468 103 HOH HOH . F 5 HOH A 101 469 104 HOH HOH . F 5 HOH A 102 470 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA OPE . . . E 4 23.262 12.292 7.237 1 57.84 ? CA OPE 442 A 1 HETATM 2 C CB OPE . . . E 4 22.21 11.361 7.858 1 57.08 ? CB OPE 442 A 1 HETATM 3 O O1 OPE . . . E 4 25.322 14.709 7.998 1 61.95 ? O1 OPE 442 A 1 HETATM 4 O O2 OPE . . . E 4 26.016 13.153 6.082 1 58.79 ? O2 OPE 442 A 1 HETATM 5 O O3 OPE . . . E 4 27.005 12.764 8.476 1 58.67 ? O3 OPE 442 A 1 HETATM 6 O O4 OPE . . . E 4 24.472 12.247 8.012 1 57.98 ? O4 OPE 442 A 1 HETATM 7 N N OPE . . . E 4 22.539 9.964 7.543 1 56.53 ? N OPE 442 A 1 HETATM 8 P P OPE . . . E 4 25.679 13.29 7.667 1 60.6 ? P OPE 442 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 1034 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #