data_3FIL # _model_server_result.job_id lqFoDMxW8ZZlu5PfiPHR1Q _model_server_result.datetime_utc '2025-08-31 07:57:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":240}' # _entry.id 3FIL # _exptl.entry_id 3FIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FIL _cell.length_a 29.694 _cell.length_b 38.93 _cell.length_c 83.326 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C FME 1 A FME 1 1_555 A N GLN 2 A GLN 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C FME 1 A FME 1 1_555 A N GLN 2 A GLN 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc1 A OD1 ASP 36 A ASP 36 1_555 C CA CA . A CA 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc2 D O HOH . A HOH 124 1_555 C CA CA . A CA 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc3 D O HOH . A HOH 229 1_555 C CA CA . A CA 240 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc4 C CA CA . A CA 240 1_555 E O HOH . B HOH 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc5 C CA CA . A CA 240 1_555 E O HOH . B HOH 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3FIL _atom_sites.fract_transf_matrix[1][1] 0.033677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025687 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 240 240 CA CA . D 4 HOH A 1 57 17 HOH HOH . D 4 HOH A 2 58 38 HOH HOH . D 4 HOH A 3 61 61 HOH HOH . D 4 HOH A 4 65 65 HOH HOH . D 4 HOH A 5 73 73 HOH HOH . D 4 HOH A 6 85 85 HOH HOH . D 4 HOH A 7 86 86 HOH HOH . D 4 HOH A 8 87 87 HOH HOH . D 4 HOH A 9 89 89 HOH HOH . D 4 HOH A 10 90 90 HOH HOH . D 4 HOH A 11 91 91 HOH HOH . D 4 HOH A 12 92 92 HOH HOH . D 4 HOH A 13 93 93 HOH HOH . D 4 HOH A 14 94 94 HOH HOH . D 4 HOH A 15 95 95 HOH HOH . D 4 HOH A 16 96 96 HOH HOH . D 4 HOH A 17 97 97 HOH HOH . D 4 HOH A 18 98 98 HOH HOH . D 4 HOH A 19 99 99 HOH HOH . D 4 HOH A 20 100 100 HOH HOH . D 4 HOH A 21 101 101 HOH HOH . D 4 HOH A 22 102 102 HOH HOH . D 4 HOH A 23 103 103 HOH HOH . D 4 HOH A 24 105 105 HOH HOH . D 4 HOH A 25 106 106 HOH HOH . D 4 HOH A 26 107 107 HOH HOH . D 4 HOH A 27 108 108 HOH HOH . D 4 HOH A 28 110 110 HOH HOH . D 4 HOH A 29 111 111 HOH HOH . D 4 HOH A 30 112 112 HOH HOH . D 4 HOH A 31 113 113 HOH HOH . D 4 HOH A 32 114 114 HOH HOH . D 4 HOH A 33 115 115 HOH HOH . D 4 HOH A 34 116 116 HOH HOH . D 4 HOH A 35 117 117 HOH HOH . D 4 HOH A 36 118 118 HOH HOH . D 4 HOH A 37 119 119 HOH HOH . D 4 HOH A 38 120 120 HOH HOH . D 4 HOH A 39 121 121 HOH HOH . D 4 HOH A 40 122 122 HOH HOH . D 4 HOH A 41 123 123 HOH HOH . D 4 HOH A 42 124 124 HOH HOH . D 4 HOH A 43 126 126 HOH HOH . D 4 HOH A 44 127 127 HOH HOH . D 4 HOH A 45 128 128 HOH HOH . D 4 HOH A 46 129 129 HOH HOH . D 4 HOH A 47 130 130 HOH HOH . D 4 HOH A 48 131 131 HOH HOH . D 4 HOH A 49 132 132 HOH HOH . D 4 HOH A 50 133 133 HOH HOH . D 4 HOH A 51 134 134 HOH HOH . D 4 HOH A 52 136 136 HOH HOH . D 4 HOH A 53 137 137 HOH HOH . D 4 HOH A 54 138 138 HOH HOH . D 4 HOH A 55 139 139 HOH HOH . D 4 HOH A 56 140 140 HOH HOH . D 4 HOH A 57 141 141 HOH HOH . D 4 HOH A 58 142 142 HOH HOH . D 4 HOH A 59 143 143 HOH HOH . D 4 HOH A 60 145 145 HOH HOH . D 4 HOH A 61 146 146 HOH HOH . D 4 HOH A 62 147 147 HOH HOH . D 4 HOH A 63 148 148 HOH HOH . D 4 HOH A 64 149 149 HOH HOH . D 4 HOH A 65 150 150 HOH HOH . D 4 HOH A 66 151 151 HOH HOH . D 4 HOH A 67 152 152 HOH HOH . D 4 HOH A 68 153 153 HOH HOH . D 4 HOH A 69 154 154 HOH HOH . D 4 HOH A 70 155 155 HOH HOH . D 4 HOH A 71 156 156 HOH HOH . D 4 HOH A 72 157 157 HOH HOH . D 4 HOH A 73 158 158 HOH HOH . D 4 HOH A 74 159 159 HOH HOH . D 4 HOH A 75 160 160 HOH HOH . D 4 HOH A 76 161 161 HOH HOH . D 4 HOH A 77 162 162 HOH HOH . D 4 HOH A 78 163 163 HOH HOH . D 4 HOH A 79 164 164 HOH HOH . D 4 HOH A 80 165 165 HOH HOH . D 4 HOH A 81 166 166 HOH HOH . D 4 HOH A 82 167 167 HOH HOH . D 4 HOH A 83 168 168 HOH HOH . D 4 HOH A 84 169 169 HOH HOH . D 4 HOH A 85 170 170 HOH HOH . D 4 HOH A 86 172 172 HOH HOH . D 4 HOH A 87 173 173 HOH HOH . D 4 HOH A 88 175 175 HOH HOH . D 4 HOH A 89 179 179 HOH HOH . D 4 HOH A 90 182 182 HOH HOH . D 4 HOH A 91 187 187 HOH HOH . D 4 HOH A 92 189 189 HOH HOH . D 4 HOH A 93 190 190 HOH HOH . D 4 HOH A 94 191 191 HOH HOH . D 4 HOH A 95 192 192 HOH HOH . D 4 HOH A 96 193 193 HOH HOH . D 4 HOH A 97 199 199 HOH HOH . D 4 HOH A 98 200 200 HOH HOH . D 4 HOH A 99 201 201 HOH HOH . D 4 HOH A 100 206 206 HOH HOH . D 4 HOH A 101 208 208 HOH HOH . D 4 HOH A 102 210 210 HOH HOH . D 4 HOH A 103 211 211 HOH HOH . D 4 HOH A 104 212 212 HOH HOH . D 4 HOH A 105 217 217 HOH HOH . D 4 HOH A 106 219 219 HOH HOH . D 4 HOH A 107 221 221 HOH HOH . D 4 HOH A 108 223 223 HOH HOH . D 4 HOH A 109 224 224 HOH HOH . D 4 HOH A 110 229 229 HOH HOH . D 4 HOH A 111 234 234 HOH HOH . D 4 HOH A 112 237 237 HOH HOH . E 4 HOH B 1 57 57 HOH HOH . E 4 HOH B 2 58 58 HOH HOH . E 4 HOH B 3 59 59 HOH HOH . E 4 HOH B 4 60 60 HOH HOH . E 4 HOH B 5 61 1 HOH HOH . E 4 HOH B 6 62 62 HOH HOH . E 4 HOH B 7 63 63 HOH HOH . E 4 HOH B 8 64 64 HOH HOH . E 4 HOH B 9 65 2 HOH HOH . E 4 HOH B 10 66 66 HOH HOH . E 4 HOH B 11 67 67 HOH HOH . E 4 HOH B 12 68 68 HOH HOH . E 4 HOH B 13 69 69 HOH HOH . E 4 HOH B 14 70 70 HOH HOH . E 4 HOH B 15 71 71 HOH HOH . E 4 HOH B 16 72 72 HOH HOH . E 4 HOH B 17 73 3 HOH HOH . E 4 HOH B 18 74 74 HOH HOH . E 4 HOH B 19 75 75 HOH HOH . E 4 HOH B 20 76 76 HOH HOH . E 4 HOH B 21 77 77 HOH HOH . E 4 HOH B 22 78 78 HOH HOH . E 4 HOH B 23 79 79 HOH HOH . E 4 HOH B 24 80 80 HOH HOH . E 4 HOH B 25 81 81 HOH HOH . E 4 HOH B 26 82 82 HOH HOH . E 4 HOH B 27 83 83 HOH HOH . E 4 HOH B 28 84 84 HOH HOH . E 4 HOH B 29 85 4 HOH HOH . E 4 HOH B 30 86 5 HOH HOH . E 4 HOH B 31 87 6 HOH HOH . E 4 HOH B 32 88 88 HOH HOH . E 4 HOH B 33 89 7 HOH HOH . E 4 HOH B 34 90 8 HOH HOH . E 4 HOH B 35 91 9 HOH HOH . E 4 HOH B 36 92 10 HOH HOH . E 4 HOH B 37 93 11 HOH HOH . E 4 HOH B 38 94 12 HOH HOH . E 4 HOH B 39 95 13 HOH HOH . E 4 HOH B 40 96 14 HOH HOH . E 4 HOH B 41 97 15 HOH HOH . E 4 HOH B 42 98 16 HOH HOH . E 4 HOH B 43 99 18 HOH HOH . E 4 HOH B 44 100 19 HOH HOH . E 4 HOH B 45 101 20 HOH HOH . E 4 HOH B 46 102 21 HOH HOH . E 4 HOH B 47 103 22 HOH HOH . E 4 HOH B 48 104 104 HOH HOH . E 4 HOH B 49 105 23 HOH HOH . E 4 HOH B 50 106 24 HOH HOH . E 4 HOH B 51 107 25 HOH HOH . E 4 HOH B 52 108 26 HOH HOH . E 4 HOH B 53 109 109 HOH HOH . E 4 HOH B 54 110 27 HOH HOH . E 4 HOH B 55 111 28 HOH HOH . E 4 HOH B 56 112 29 HOH HOH . E 4 HOH B 57 113 30 HOH HOH . E 4 HOH B 58 114 31 HOH HOH . E 4 HOH B 59 115 32 HOH HOH . E 4 HOH B 60 116 33 HOH HOH . E 4 HOH B 61 117 34 HOH HOH . E 4 HOH B 62 118 35 HOH HOH . E 4 HOH B 63 119 36 HOH HOH . E 4 HOH B 64 120 37 HOH HOH . E 4 HOH B 65 121 39 HOH HOH . E 4 HOH B 66 122 40 HOH HOH . E 4 HOH B 67 123 41 HOH HOH . E 4 HOH B 68 124 42 HOH HOH . E 4 HOH B 69 125 125 HOH HOH . E 4 HOH B 70 126 43 HOH HOH . E 4 HOH B 71 127 44 HOH HOH . E 4 HOH B 72 128 45 HOH HOH . E 4 HOH B 73 129 46 HOH HOH . E 4 HOH B 74 130 47 HOH HOH . E 4 HOH B 75 131 48 HOH HOH . E 4 HOH B 76 132 49 HOH HOH . E 4 HOH B 77 133 50 HOH HOH . E 4 HOH B 78 134 51 HOH HOH . E 4 HOH B 79 135 135 HOH HOH . E 4 HOH B 80 136 52 HOH HOH . E 4 HOH B 81 137 53 HOH HOH . E 4 HOH B 82 138 54 HOH HOH . E 4 HOH B 83 139 55 HOH HOH . E 4 HOH B 84 140 56 HOH HOH . E 4 HOH B 85 144 144 HOH HOH . E 4 HOH B 86 171 171 HOH HOH . E 4 HOH B 87 174 174 HOH HOH . E 4 HOH B 88 176 176 HOH HOH . E 4 HOH B 89 177 177 HOH HOH . E 4 HOH B 90 178 178 HOH HOH . E 4 HOH B 91 180 180 HOH HOH . E 4 HOH B 92 181 181 HOH HOH . E 4 HOH B 93 183 183 HOH HOH . E 4 HOH B 94 184 184 HOH HOH . E 4 HOH B 95 185 185 HOH HOH . E 4 HOH B 96 186 186 HOH HOH . E 4 HOH B 97 188 188 HOH HOH . E 4 HOH B 98 194 194 HOH HOH . E 4 HOH B 99 195 195 HOH HOH . E 4 HOH B 100 196 196 HOH HOH . E 4 HOH B 101 197 197 HOH HOH . E 4 HOH B 102 198 198 HOH HOH . E 4 HOH B 103 202 202 HOH HOH . E 4 HOH B 104 203 203 HOH HOH . E 4 HOH B 105 204 204 HOH HOH . E 4 HOH B 106 205 205 HOH HOH . E 4 HOH B 107 207 207 HOH HOH . E 4 HOH B 108 209 209 HOH HOH . E 4 HOH B 109 213 213 HOH HOH . E 4 HOH B 110 214 214 HOH HOH . E 4 HOH B 111 215 215 HOH HOH . E 4 HOH B 112 216 216 HOH HOH . E 4 HOH B 113 218 218 HOH HOH . E 4 HOH B 114 220 220 HOH HOH . E 4 HOH B 115 222 222 HOH HOH . E 4 HOH B 116 225 225 HOH HOH . E 4 HOH B 117 226 226 HOH HOH . E 4 HOH B 118 227 227 HOH HOH . E 4 HOH B 119 228 228 HOH HOH . E 4 HOH B 120 230 230 HOH HOH . E 4 HOH B 121 231 231 HOH HOH . E 4 HOH B 122 232 232 HOH HOH . E 4 HOH B 123 233 233 HOH HOH . E 4 HOH B 124 235 235 HOH HOH . E 4 HOH B 125 236 236 HOH HOH . E 4 HOH B 126 238 238 HOH HOH . E 4 HOH B 127 239 239 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -6.955 _atom_site.Cartn_y 4.576 _atom_site.Cartn_z 15.535 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 15.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 240 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #