data_3FJO # _model_server_result.job_id MPSzTe4iqtDV0DUTBwMmxQ _model_server_result.datetime_utc '2024-12-21 13:47:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fjo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":751}' # _entry.id 3FJO # _exptl.entry_id 3FJO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.36 _cell.angle_gamma 90 _cell.entry_id 3FJO _cell.length_a 146.8 _cell.length_b 60.7 _cell.length_c 78.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 174 n n N1 C10 FMN doub 175 n n C2 O2 FMN doub 176 n n C2 N3 FMN sing 177 n n N3 C4 FMN sing 178 n n N3 HN3 FMN sing 179 n n C4 O4 FMN doub 180 n n C4 C4A FMN sing 181 n n C4A N5 FMN doub 182 n n C4A C10 FMN sing 183 n n N5 C5A FMN sing 184 n n C5A C6 FMN doub 185 n y C5A C9A FMN sing 186 n y C6 C7 FMN sing 187 n y C6 H6 FMN sing 188 n n C7 C7M FMN sing 189 n n C7 C8 FMN doub 190 n y C7M HM71 FMN sing 191 n n C7M HM72 FMN sing 192 n n C7M HM73 FMN sing 193 n n C8 C8M FMN sing 194 n n C8 C9 FMN sing 195 n y C8M HM81 FMN sing 196 n n C8M HM82 FMN sing 197 n n C8M HM83 FMN sing 198 n n C9 C9A FMN doub 199 n y C9 H9 FMN sing 200 n n C9A N10 FMN sing 201 n n N10 C10 FMN sing 202 n n N10 C1' FMN sing 203 n n C1' C2' FMN sing 204 n n C1' "H1'1" FMN sing 205 n n C1' "H1'2" FMN sing 206 n n C2' O2' FMN sing 207 n n C2' C3' FMN sing 208 n n C2' H2' FMN sing 209 n n O2' HO2' FMN sing 210 n n C3' O3' FMN sing 211 n n C3' C4' FMN sing 212 n n C3' H3' FMN sing 213 n n O3' HO3' FMN sing 214 n n C4' O4' FMN sing 215 n n C4' C5' FMN sing 216 n n C4' H4' FMN sing 217 n n O4' HO4' FMN sing 218 n n C5' O5' FMN sing 219 n n C5' "H5'1" FMN sing 220 n n C5' "H5'2" FMN sing 221 n n O5' P FMN sing 222 n n P O1P FMN doub 223 n n P O2P FMN sing 224 n n P O3P FMN sing 225 n n O2P HOP2 FMN sing 226 n n O3P HOP3 FMN sing 227 n n # _atom_sites.entry_id 3FJO _atom_sites.fract_transf_matrix[1][1] 0.006812 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001618 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013033 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 751 751 FMN FMN . C 3 FAD A 1 750 750 FAD FAD . D 4 HOH A 1 1 1 HOH HOH . D 4 HOH A 2 2 2 HOH HOH . D 4 HOH A 3 3 3 HOH HOH . D 4 HOH A 4 4 4 HOH HOH . D 4 HOH A 5 5 5 HOH HOH . D 4 HOH A 6 6 6 HOH HOH . D 4 HOH A 7 7 7 HOH HOH . D 4 HOH A 8 8 8 HOH HOH . D 4 HOH A 9 9 9 HOH HOH . D 4 HOH A 10 10 10 HOH HOH . D 4 HOH A 11 11 11 HOH HOH . D 4 HOH A 12 12 12 HOH HOH . D 4 HOH A 13 13 13 HOH HOH . D 4 HOH A 14 14 14 HOH HOH . D 4 HOH A 15 15 15 HOH HOH . D 4 HOH A 16 16 16 HOH HOH . D 4 HOH A 17 17 17 HOH HOH . D 4 HOH A 18 18 18 HOH HOH . D 4 HOH A 19 19 19 HOH HOH . D 4 HOH A 20 20 20 HOH HOH . D 4 HOH A 21 658 21 HOH HOH . D 4 HOH A 22 659 22 HOH HOH . D 4 HOH A 23 660 23 HOH HOH . D 4 HOH A 24 661 24 HOH HOH . D 4 HOH A 25 662 25 HOH HOH . D 4 HOH A 26 663 26 HOH HOH . D 4 HOH A 27 664 27 HOH HOH . D 4 HOH A 28 665 28 HOH HOH . D 4 HOH A 29 666 29 HOH HOH . D 4 HOH A 30 667 30 HOH HOH . D 4 HOH A 31 668 31 HOH HOH . D 4 HOH A 32 669 32 HOH HOH . D 4 HOH A 33 670 33 HOH HOH . D 4 HOH A 34 671 34 HOH HOH . D 4 HOH A 35 672 35 HOH HOH . D 4 HOH A 36 673 36 HOH HOH . D 4 HOH A 37 674 37 HOH HOH . D 4 HOH A 38 675 38 HOH HOH . D 4 HOH A 39 676 39 HOH HOH . D 4 HOH A 40 677 40 HOH HOH . D 4 HOH A 41 678 41 HOH HOH . D 4 HOH A 42 679 42 HOH HOH . D 4 HOH A 43 680 43 HOH HOH . D 4 HOH A 44 681 44 HOH HOH . D 4 HOH A 45 682 45 HOH HOH . D 4 HOH A 46 683 46 HOH HOH . D 4 HOH A 47 684 47 HOH HOH . D 4 HOH A 48 685 48 HOH HOH . D 4 HOH A 49 686 49 HOH HOH . D 4 HOH A 50 687 50 HOH HOH . D 4 HOH A 51 688 51 HOH HOH . D 4 HOH A 52 689 52 HOH HOH . D 4 HOH A 53 690 53 HOH HOH . D 4 HOH A 54 691 54 HOH HOH . D 4 HOH A 55 692 55 HOH HOH . D 4 HOH A 56 693 56 HOH HOH . D 4 HOH A 57 694 57 HOH HOH . D 4 HOH A 58 695 58 HOH HOH . D 4 HOH A 59 696 59 HOH HOH . D 4 HOH A 60 697 60 HOH HOH . D 4 HOH A 61 698 61 HOH HOH . D 4 HOH A 62 699 62 HOH HOH . D 4 HOH A 63 700 63 HOH HOH . D 4 HOH A 64 701 64 HOH HOH . D 4 HOH A 65 702 65 HOH HOH . D 4 HOH A 66 703 66 HOH HOH . D 4 HOH A 67 704 67 HOH HOH . D 4 HOH A 68 705 68 HOH HOH . D 4 HOH A 69 706 69 HOH HOH . D 4 HOH A 70 707 70 HOH HOH . D 4 HOH A 71 708 71 HOH HOH . D 4 HOH A 72 709 72 HOH HOH . D 4 HOH A 73 710 73 HOH HOH . D 4 HOH A 74 711 74 HOH HOH . D 4 HOH A 75 712 75 HOH HOH . D 4 HOH A 76 713 76 HOH HOH . D 4 HOH A 77 714 77 HOH HOH . D 4 HOH A 78 715 78 HOH HOH . D 4 HOH A 79 716 79 HOH HOH . D 4 HOH A 80 717 80 HOH HOH . D 4 HOH A 81 718 81 HOH HOH . D 4 HOH A 82 719 82 HOH HOH . D 4 HOH A 83 720 83 HOH HOH . D 4 HOH A 84 721 84 HOH HOH . D 4 HOH A 85 722 85 HOH HOH . D 4 HOH A 86 723 86 HOH HOH . D 4 HOH A 87 724 87 HOH HOH . D 4 HOH A 88 725 88 HOH HOH . D 4 HOH A 89 726 89 HOH HOH . D 4 HOH A 90 727 90 HOH HOH . D 4 HOH A 91 728 91 HOH HOH . D 4 HOH A 92 729 92 HOH HOH . D 4 HOH A 93 730 93 HOH HOH . D 4 HOH A 94 731 94 HOH HOH . D 4 HOH A 95 732 95 HOH HOH . D 4 HOH A 96 733 96 HOH HOH . D 4 HOH A 97 734 97 HOH HOH . D 4 HOH A 98 735 98 HOH HOH . D 4 HOH A 99 736 99 HOH HOH . D 4 HOH A 100 737 100 HOH HOH . D 4 HOH A 101 738 101 HOH HOH . D 4 HOH A 102 739 102 HOH HOH . D 4 HOH A 103 740 103 HOH HOH . D 4 HOH A 104 741 104 HOH HOH . D 4 HOH A 105 742 105 HOH HOH . D 4 HOH A 106 743 106 HOH HOH . D 4 HOH A 107 744 107 HOH HOH . D 4 HOH A 108 745 108 HOH HOH . D 4 HOH A 109 746 109 HOH HOH . D 4 HOH A 110 747 110 HOH HOH . D 4 HOH A 111 748 111 HOH HOH . D 4 HOH A 112 749 112 HOH HOH . D 4 HOH A 113 752 113 HOH HOH . D 4 HOH A 114 753 114 HOH HOH . D 4 HOH A 115 754 115 HOH HOH . D 4 HOH A 116 755 116 HOH HOH . D 4 HOH A 117 756 117 HOH HOH . D 4 HOH A 118 757 118 HOH HOH . D 4 HOH A 119 758 119 HOH HOH . D 4 HOH A 120 759 120 HOH HOH . D 4 HOH A 121 760 121 HOH HOH . D 4 HOH A 122 761 122 HOH HOH . D 4 HOH A 123 762 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 -43.933 35.471 -0.541 1 23.34 ? N1 FMN 751 A 1 HETATM 2 C C2 FMN . . . B 2 -44.309 36.074 0.641 1 23.54 ? C2 FMN 751 A 1 HETATM 3 O O2 FMN . . . B 2 -43.47 36.339 1.514 1 23.41 ? O2 FMN 751 A 1 HETATM 4 N N3 FMN . . . B 2 -45.642 36.376 0.837 1 23.57 ? N3 FMN 751 A 1 HETATM 5 C C4 FMN . . . B 2 -46.594 36.088 -0.117 1 23.27 ? C4 FMN 751 A 1 HETATM 6 O O4 FMN . . . B 2 -47.766 36.394 0.109 1 23.23 ? O4 FMN 751 A 1 HETATM 7 C C4A FMN . . . B 2 -46.212 35.487 -1.314 1 23.33 ? C4A FMN 751 A 1 HETATM 8 N N5 FMN . . . B 2 -47.143 35.186 -2.286 1 23.64 ? N5 FMN 751 A 1 HETATM 9 C C5A FMN . . . B 2 -46.753 34.593 -3.472 1 23.68 ? C5A FMN 751 A 1 HETATM 10 C C6 FMN . . . B 2 -47.711 34.307 -4.445 1 23.65 ? C6 FMN 751 A 1 HETATM 11 C C7 FMN . . . B 2 -47.345 33.717 -5.661 1 23.67 ? C7 FMN 751 A 1 HETATM 12 C C7M FMN . . . B 2 -48.3 33.599 -6.76 1 23.46 ? C7M FMN 751 A 1 HETATM 13 C C8 FMN . . . B 2 -46.01 33.394 -5.883 1 23.38 ? C8 FMN 751 A 1 HETATM 14 C C8M FMN . . . B 2 -45.42 32.69 -7.091 1 23.57 ? C8M FMN 751 A 1 HETATM 15 C C9 FMN . . . B 2 -45.046 33.683 -4.918 1 23.41 ? C9 FMN 751 A 1 HETATM 16 C C9A FMN . . . B 2 -45.409 34.28 -3.697 1 23.65 ? C9A FMN 751 A 1 HETATM 17 N N10 FMN . . . B 2 -44.472 34.571 -2.704 1 22.83 ? N10 FMN 751 A 1 HETATM 18 C C10 FMN . . . B 2 -44.87 35.178 -1.524 1 23.1 ? C10 FMN 751 A 1 HETATM 19 C C1' FMN . . . B 2 -43.047 34.075 -2.805 1 22.25 ? C1' FMN 751 A 1 HETATM 20 C C2' FMN . . . B 2 -42.878 32.578 -2.548 1 20.42 ? C2' FMN 751 A 1 HETATM 21 O O2' FMN . . . B 2 -43.238 32.252 -1.226 1 20.7 ? O2' FMN 751 A 1 HETATM 22 C C3' FMN . . . B 2 -41.423 32.221 -2.778 1 19.96 ? C3' FMN 751 A 1 HETATM 23 O O3' FMN . . . B 2 -41.213 32.262 -4.171 1 19.75 ? O3' FMN 751 A 1 HETATM 24 C C4' FMN . . . B 2 -40.996 30.869 -2.187 1 20.04 ? C4' FMN 751 A 1 HETATM 25 O O4' FMN . . . B 2 -39.62 30.659 -2.439 1 19.53 ? O4' FMN 751 A 1 HETATM 26 C C5' FMN . . . B 2 -41.81 29.707 -2.764 1 20.64 ? C5' FMN 751 A 1 HETATM 27 O O5' FMN . . . B 2 -41.322 28.474 -2.286 1 19.82 ? O5' FMN 751 A 1 HETATM 28 P P FMN . . . B 2 -41.836 27.103 -2.936 1 20.71 ? P FMN 751 A 1 HETATM 29 O O1P FMN . . . B 2 -41.468 25.975 -2.005 1 19.07 ? O1P FMN 751 A 1 HETATM 30 O O2P FMN . . . B 2 -41.128 26.91 -4.258 1 21.81 ? O2P FMN 751 A 1 HETATM 31 O O3P FMN . . . B 2 -43.319 27.138 -3.203 1 19.17 ? O3P FMN 751 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 1311 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #