data_3FL7 # _model_server_result.job_id NO8uacG2TyeRFxtDy2I6MQ _model_server_result.datetime_utc '2024-11-04 20:36:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fl7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 3FL7 # _exptl.entry_id 3FL7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FL7 _cell.length_a 59.358 _cell.length_b 89.992 _cell.length_c 136.476 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FL7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1,2 A,B,C,D,E,F,G 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 59.358 89.992 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 75 A CYS 70 1_555 A SG CYS 193 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 110 A CYS 105 1_555 A SG CYS 120 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 206 A CYS 201 1_555 A SG CYS 252 A CYS 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf4 A SG CYS 235 A CYS 230 1_555 A SG CYS 265 A CYS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf5 A SG CYS 267 A CYS 262 1_555 A SG CYS 278 A CYS 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf6 A SG CYS 281 A CYS 276 1_555 A SG CYS 295 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf7 A SG CYS 298 A CYS 293 1_555 A SG CYS 312 A CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf8 A SG CYS 314 A CYS 309 1_555 A SG CYS 330 A CYS 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf9 A SG CYS 371 A CYS 366 1_555 A SG CYS 384 A CYS 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf10 A SG CYS 374 A CYS 369 1_555 A SG CYS 381 A CYS 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A ND2 ASN 412 A ASN 407 1_555 F C1 NAG . A NAG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? metalc ? metalc1 A OD2 ASP 153 A ASP 148 1_555 B NA NA . A NA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc2 A OE2 GLU 171 A GLU 166 1_555 B NA NA . A NA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3FL7 _atom_sites.fract_transf_matrix[1][1] 0.016847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 1001 1002 NA NA . C 3 CL A 1 1002 1003 CL CL . D 3 CL A 1 1003 1004 CL CL . E 3 CL A 1 1004 1005 CL CL . F 4 NAG A 1 1005 1001 NAG NAG . G 5 HOH A 1 1006 1006 HOH HOH . G 5 HOH A 2 1007 1007 HOH HOH . G 5 HOH A 3 1008 1008 HOH HOH . G 5 HOH A 4 1009 1009 HOH HOH . G 5 HOH A 5 1010 1010 HOH HOH . G 5 HOH A 6 1011 1011 HOH HOH . G 5 HOH A 7 1012 1012 HOH HOH . G 5 HOH A 8 1013 1013 HOH HOH . G 5 HOH A 9 1014 1014 HOH HOH . G 5 HOH A 10 1015 1015 HOH HOH . G 5 HOH A 11 1016 1016 HOH HOH . G 5 HOH A 12 1017 1017 HOH HOH . G 5 HOH A 13 1018 1018 HOH HOH . G 5 HOH A 14 1019 1019 HOH HOH . G 5 HOH A 15 1020 1020 HOH HOH . G 5 HOH A 16 1021 1021 HOH HOH . G 5 HOH A 17 1022 1022 HOH HOH . G 5 HOH A 18 1023 1023 HOH HOH . G 5 HOH A 19 1024 1024 HOH HOH . G 5 HOH A 20 1025 1025 HOH HOH . G 5 HOH A 21 1026 1026 HOH HOH . G 5 HOH A 22 1027 1027 HOH HOH . G 5 HOH A 23 1028 1028 HOH HOH . G 5 HOH A 24 1029 1029 HOH HOH . G 5 HOH A 25 1030 1030 HOH HOH . G 5 HOH A 26 1031 1031 HOH HOH . G 5 HOH A 27 1032 1032 HOH HOH . G 5 HOH A 28 1033 1033 HOH HOH . G 5 HOH A 29 1034 1034 HOH HOH . G 5 HOH A 30 1035 1035 HOH HOH . G 5 HOH A 31 1036 1036 HOH HOH . G 5 HOH A 32 1037 1037 HOH HOH . G 5 HOH A 33 1038 1038 HOH HOH . G 5 HOH A 34 1039 1039 HOH HOH . G 5 HOH A 35 1040 1040 HOH HOH . G 5 HOH A 36 1041 1041 HOH HOH . G 5 HOH A 37 1042 1042 HOH HOH . G 5 HOH A 38 1043 1043 HOH HOH . G 5 HOH A 39 1044 1044 HOH HOH . G 5 HOH A 40 1045 1045 HOH HOH . G 5 HOH A 41 1046 1046 HOH HOH . G 5 HOH A 42 1047 1047 HOH HOH . G 5 HOH A 43 1048 1048 HOH HOH . G 5 HOH A 44 1049 1049 HOH HOH . G 5 HOH A 45 1050 1050 HOH HOH . G 5 HOH A 46 1051 1051 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.628 _atom_site.Cartn_y 39.853 _atom_site.Cartn_z 4.945 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #