data_3FME # _model_server_result.job_id if3B0FyIj-GYQJo4TK0KCg _model_server_result.datetime_utc '2024-12-02 14:59:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fme # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3FME # _exptl.entry_id 3FME _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3FME _cell.length_a 132.756 _cell.length_b 132.756 _cell.length_c 45.719 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FME _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 290 n n O4 C21 STU sing 291 n n C25 C24 STU sing 292 n n C25 N3 STU sing 293 n n C25 H25 STU sing 294 n n C24 C23 STU sing 295 n n C24 H241 STU sing 296 n n C24 H242 STU sing 297 n n C23 C22 STU sing 298 n n C23 N4 STU sing 299 n n C23 H23 STU sing 300 n n C22 C21 STU sing 301 n n C22 O6 STU sing 302 n n C22 H22 STU sing 303 n n C21 C26 STU sing 304 n n C21 N2 STU sing 305 n n C26 H261 STU sing 306 n n C26 H262 STU sing 307 n n C26 H263 STU sing 308 n n N2 C18 STU sing 309 n y N2 C17 STU sing 310 n y C18 C19 STU doub 311 n y C18 C11 STU sing 312 n y C19 C6 STU sing 313 n y C19 N3 STU sing 314 n y C6 C7 STU doub 315 n y C6 C5 STU sing 316 n y C7 C10 STU sing 317 n y C7 C8 STU sing 318 n n C10 C11 STU doub 319 n y C10 C9 STU sing 320 n n C11 C12 STU sing 321 n y C12 C17 STU doub 322 n y C12 C13 STU sing 323 n y C17 C16 STU sing 324 n y C16 C15 STU doub 325 n y C16 H16 STU sing 326 n n C15 C14 STU sing 327 n y C15 H15 STU sing 328 n n C14 C13 STU doub 329 n y C14 H14 STU sing 330 n n C13 H13 STU sing 331 n n C9 N1 STU sing 332 n n C9 H91 STU sing 333 n n C9 H92 STU sing 334 n n N1 C8 STU sing 335 n n N1 HN1 STU sing 336 n n C8 O5 STU doub 337 n n C5 C20 STU doub 338 n y C5 C4 STU sing 339 n y C20 C1 STU sing 340 n y C20 N3 STU sing 341 n y C1 C2 STU doub 342 n y C1 H1 STU sing 343 n n C2 C3 STU sing 344 n y C2 H2 STU sing 345 n n C3 C4 STU doub 346 n y C3 H3 STU sing 347 n n C4 H4 STU sing 348 n n O6 C27 STU sing 349 n n C27 H271 STU sing 350 n n C27 H272 STU sing 351 n n C27 H273 STU sing 352 n n N4 C28 STU sing 353 n n N4 HN4 STU sing 354 n n C28 H281 STU sing 355 n n C28 H282 STU sing 356 n n C28 H283 STU sing 357 n n # _atom_sites.entry_id 3FME _atom_sites.fract_transf_matrix[1][1] 0.007533 _atom_sites.fract_transf_matrix[1][2] 0.004349 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 STU A 1 1 1 STU STU . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 8 8 HOH HOH . C 3 HOH A 7 9 9 HOH HOH . C 3 HOH A 8 10 10 HOH HOH . C 3 HOH A 9 11 11 HOH HOH . C 3 HOH A 10 12 12 HOH HOH . C 3 HOH A 11 13 13 HOH HOH . C 3 HOH A 12 16 16 HOH HOH . C 3 HOH A 13 17 17 HOH HOH . C 3 HOH A 14 18 18 HOH HOH . C 3 HOH A 15 19 19 HOH HOH . C 3 HOH A 16 24 24 HOH HOH . C 3 HOH A 17 25 25 HOH HOH . C 3 HOH A 18 26 26 HOH HOH . C 3 HOH A 19 27 27 HOH HOH . C 3 HOH A 20 28 28 HOH HOH . C 3 HOH A 21 29 29 HOH HOH . C 3 HOH A 22 32 32 HOH HOH . C 3 HOH A 23 33 33 HOH HOH . C 3 HOH A 24 34 34 HOH HOH . C 3 HOH A 25 35 35 HOH HOH . C 3 HOH A 26 36 36 HOH HOH . C 3 HOH A 27 37 37 HOH HOH . C 3 HOH A 28 39 39 HOH HOH . C 3 HOH A 29 40 40 HOH HOH . C 3 HOH A 30 41 41 HOH HOH . C 3 HOH A 31 42 42 HOH HOH . C 3 HOH A 32 335 1 HOH HOH . C 3 HOH A 33 336 45 HOH HOH . C 3 HOH A 34 337 46 HOH HOH . C 3 HOH A 35 338 47 HOH HOH . C 3 HOH A 36 339 48 HOH HOH . C 3 HOH A 37 340 49 HOH HOH . C 3 HOH A 38 341 51 HOH HOH . C 3 HOH A 39 342 53 HOH HOH . C 3 HOH A 40 343 54 HOH HOH . C 3 HOH A 41 344 55 HOH HOH . C 3 HOH A 42 345 56 HOH HOH . C 3 HOH A 43 346 57 HOH HOH . C 3 HOH A 44 347 58 HOH HOH . C 3 HOH A 45 348 60 HOH HOH . C 3 HOH A 46 349 61 HOH HOH . C 3 HOH A 47 350 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . B 2 16.253 49.883 10.711 1 58.89 ? O4 STU 1 A 1 HETATM 2 C C25 STU . . . B 2 16.521 50.065 9.269 1 61.21 ? C25 STU 1 A 1 HETATM 3 C C24 STU . . . B 2 17.515 51.119 8.855 1 68.72 ? C24 STU 1 A 1 HETATM 4 C C23 STU . . . B 2 18.191 51.645 10.101 1 66 ? C23 STU 1 A 1 HETATM 5 C C22 STU . . . B 2 17.137 52.224 11.105 1 66.97 ? C22 STU 1 A 1 HETATM 6 C C21 STU . . . B 2 16.142 51.03 11.538 1 63.15 ? C21 STU 1 A 1 HETATM 7 C C26 STU . . . B 2 16.463 50.595 12.983 1 50.66 ? C26 STU 1 A 1 HETATM 8 N N2 STU . . . B 2 14.687 51.397 11.439 1 60.97 ? N2 STU 1 A 1 HETATM 9 C C18 STU . . . B 2 13.866 51.243 10.398 1 54.38 ? C18 STU 1 A 1 HETATM 10 C C19 STU . . . B 2 14.097 50.723 9.132 1 56.11 ? C19 STU 1 A 1 HETATM 11 C C6 STU . . . B 2 13.076 50.672 8.193 1 57.03 ? C6 STU 1 A 1 HETATM 12 C C7 STU . . . B 2 11.805 51.151 8.536 1 58 ? C7 STU 1 A 1 HETATM 13 C C10 STU . . . B 2 11.595 51.674 9.818 1 55.04 ? C10 STU 1 A 1 HETATM 14 C C11 STU . . . B 2 12.606 51.723 10.748 1 50.73 ? C11 STU 1 A 1 HETATM 15 C C12 STU . . . B 2 12.692 52.19 12.045 1 50.82 ? C12 STU 1 A 1 HETATM 16 C C17 STU . . . B 2 14.006 51.967 12.459 1 55 ? C17 STU 1 A 1 HETATM 17 C C16 STU . . . B 2 14.385 52.335 13.746 1 56.37 ? C16 STU 1 A 1 HETATM 18 C C15 STU . . . B 2 13.465 52.904 14.62 1 52.97 ? C15 STU 1 A 1 HETATM 19 C C14 STU . . . B 2 12.163 53.115 14.187 1 57.96 ? C14 STU 1 A 1 HETATM 20 C C13 STU . . . B 2 11.767 52.757 12.906 1 60.14 ? C13 STU 1 A 1 HETATM 21 C C9 STU . . . B 2 10.158 52.135 9.948 1 58.42 ? C9 STU 1 A 1 HETATM 22 N N1 STU . . . B 2 9.639 51.791 8.617 1 55.83 ? N1 STU 1 A 1 HETATM 23 C C8 STU . . . B 2 10.584 51.239 7.852 1 61.05 ? C8 STU 1 A 1 HETATM 24 O O5 STU . . . B 2 10.379 50.805 6.712 1 62.52 ? O5 STU 1 A 1 HETATM 25 C C5 STU . . . B 2 13.647 50.107 7.051 1 55.96 ? C5 STU 1 A 1 HETATM 26 C C20 STU . . . B 2 14.987 49.844 7.355 1 61.74 ? C20 STU 1 A 1 HETATM 27 C C1 STU . . . B 2 15.836 49.26 6.409 1 60.31 ? C1 STU 1 A 1 HETATM 28 C C2 STU . . . B 2 15.344 48.935 5.147 1 64.63 ? C2 STU 1 A 1 HETATM 29 C C3 STU . . . B 2 14.007 49.2 4.835 1 72.86 ? C3 STU 1 A 1 HETATM 30 C C4 STU . . . B 2 13.162 49.785 5.786 1 67.19 ? C4 STU 1 A 1 HETATM 31 N N3 STU . . . B 2 15.216 50.221 8.604 1 61.93 ? N3 STU 1 A 1 HETATM 32 O O6 STU . . . B 2 16.4 53.513 10.784 1 69.75 ? O6 STU 1 A 1 HETATM 33 C C27 STU . . . B 2 15.866 53.618 9.453 1 65.19 ? C27 STU 1 A 1 HETATM 34 N N4 STU . . . B 2 19.278 52.569 9.691 1 77.12 ? N4 STU 1 A 1 HETATM 35 C C28 STU . . . B 2 20.193 51.883 8.716 1 60.56 ? C28 STU 1 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #