data_3FMW # _model_server_result.job_id IUJ7ri6vEPrbOC85i04b2g _model_server_result.datetime_utc '2024-11-22 19:43:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":535}' # _entry.id 3FMW # _exptl.entry_id 3FMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.03 _cell.angle_gamma 90 _cell.entry_id 3FMW _cell.length_a 145.265 _cell.length_b 114.437 _cell.length_c 138.563 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,I 1 1 C,H,K 1 2 B,F,G,J 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 -x+1/2,y+1/2,-z -1 0 0 0 1 0 0 0 -1 72.6325 57.2185 0 3 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 114.024419 0 134.9953 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3FMW _atom_sites.fract_transf_matrix[1][1] 0.006884 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001593 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FAD A 1 534 500 FAD FAD . E 3 EDO A 1 535 1 EDO EDO . F 2 FAD B 1 534 500 FAD FAD . G 3 EDO B 1 535 1 EDO EDO . H 2 FAD C 1 534 500 FAD FAD . I 4 HOH A 1 536 2 HOH HOH . I 4 HOH A 2 537 9 HOH HOH . I 4 HOH A 3 538 11 HOH HOH . I 4 HOH A 4 539 20 HOH HOH . J 4 HOH B 1 536 22 HOH HOH . J 4 HOH B 2 537 23 HOH HOH . J 4 HOH B 3 538 26 HOH HOH . J 4 HOH B 4 539 28 HOH HOH . J 4 HOH B 5 540 31 HOH HOH . J 4 HOH B 6 541 32 HOH HOH . J 4 HOH B 7 542 33 HOH HOH . K 4 HOH C 1 535 3 HOH HOH . K 4 HOH C 2 536 6 HOH HOH . K 4 HOH C 3 537 38 HOH HOH . K 4 HOH C 4 538 41 HOH HOH . K 4 HOH C 5 539 43 HOH HOH . K 4 HOH C 6 540 49 HOH HOH . K 4 HOH C 7 541 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 25.119 -15.888 11.111 1 107.38 ? C1 EDO 535 A 1 HETATM 2 O O1 EDO . . . E 3 25.737 -15.24 12.369 1 154.22 ? O1 EDO 535 A 1 HETATM 3 C C2 EDO . . . E 3 26.27 -16.528 10.204 1 59.69 ? C2 EDO 535 A 1 HETATM 4 O O2 EDO . . . E 3 27.48 -16.736 11.122 1 250.72 ? O2 EDO 535 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #