data_3FN4 # _model_server_result.job_id 9td4JLwks8ErEc9dEezf1w _model_server_result.datetime_utc '2024-11-26 02:02:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fn4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":402}' # _entry.id 3FN4 # _exptl.entry_id 3FN4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.13 _cell.angle_gamma 90 _cell.entry_id 3FN4 _cell.length_a 80.66 _cell.length_b 66.089 _cell.length_c 75.551 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FN4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_756 -x+2,y,-z+1 -1 0 0 0 1 0 0 0 -1 142.876278 0 73.265154 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3FN4 _atom_sites.fract_transf_matrix[1][1] 0.012398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003121 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013649 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 402 1 GOL GOL . C 3 SO4 A 1 403 3 SO4 SO4 . D 4 HOH A 1 404 1 HOH HOH . D 4 HOH A 2 405 2 HOH HOH . D 4 HOH A 3 406 3 HOH HOH . D 4 HOH A 4 407 4 HOH HOH . D 4 HOH A 5 408 5 HOH HOH . D 4 HOH A 6 409 6 HOH HOH . D 4 HOH A 7 410 7 HOH HOH . D 4 HOH A 8 411 8 HOH HOH . D 4 HOH A 9 412 9 HOH HOH . D 4 HOH A 10 413 10 HOH HOH . D 4 HOH A 11 414 11 HOH HOH . D 4 HOH A 12 415 12 HOH HOH . D 4 HOH A 13 416 13 HOH HOH . D 4 HOH A 14 417 14 HOH HOH . D 4 HOH A 15 418 15 HOH HOH . D 4 HOH A 16 419 16 HOH HOH . D 4 HOH A 17 420 17 HOH HOH . D 4 HOH A 18 421 18 HOH HOH . D 4 HOH A 19 422 19 HOH HOH . D 4 HOH A 20 423 20 HOH HOH . D 4 HOH A 21 424 21 HOH HOH . D 4 HOH A 22 425 22 HOH HOH . D 4 HOH A 23 426 23 HOH HOH . D 4 HOH A 24 427 24 HOH HOH . D 4 HOH A 25 428 25 HOH HOH . D 4 HOH A 26 429 26 HOH HOH . D 4 HOH A 27 430 27 HOH HOH . D 4 HOH A 28 431 28 HOH HOH . D 4 HOH A 29 432 29 HOH HOH . D 4 HOH A 30 433 30 HOH HOH . D 4 HOH A 31 434 31 HOH HOH . D 4 HOH A 32 435 32 HOH HOH . D 4 HOH A 33 436 33 HOH HOH . D 4 HOH A 34 437 34 HOH HOH . D 4 HOH A 35 438 35 HOH HOH . D 4 HOH A 36 439 36 HOH HOH . D 4 HOH A 37 440 37 HOH HOH . D 4 HOH A 38 441 38 HOH HOH . D 4 HOH A 39 442 39 HOH HOH . D 4 HOH A 40 443 40 HOH HOH . D 4 HOH A 41 444 41 HOH HOH . D 4 HOH A 42 445 42 HOH HOH . D 4 HOH A 43 446 43 HOH HOH . D 4 HOH A 44 447 44 HOH HOH . D 4 HOH A 45 448 45 HOH HOH . D 4 HOH A 46 449 46 HOH HOH . D 4 HOH A 47 450 47 HOH HOH . D 4 HOH A 48 451 48 HOH HOH . D 4 HOH A 49 452 49 HOH HOH . D 4 HOH A 50 453 50 HOH HOH . D 4 HOH A 51 454 51 HOH HOH . D 4 HOH A 52 455 52 HOH HOH . D 4 HOH A 53 456 53 HOH HOH . D 4 HOH A 54 457 54 HOH HOH . D 4 HOH A 55 458 55 HOH HOH . D 4 HOH A 56 459 56 HOH HOH . D 4 HOH A 57 460 57 HOH HOH . D 4 HOH A 58 461 58 HOH HOH . D 4 HOH A 59 462 59 HOH HOH . D 4 HOH A 60 463 60 HOH HOH . D 4 HOH A 61 464 61 HOH HOH . D 4 HOH A 62 465 62 HOH HOH . D 4 HOH A 63 466 63 HOH HOH . D 4 HOH A 64 467 64 HOH HOH . D 4 HOH A 65 468 65 HOH HOH . D 4 HOH A 66 469 66 HOH HOH . D 4 HOH A 67 470 67 HOH HOH . D 4 HOH A 68 471 68 HOH HOH . D 4 HOH A 69 472 69 HOH HOH . D 4 HOH A 70 473 70 HOH HOH . D 4 HOH A 71 474 71 HOH HOH . D 4 HOH A 72 475 72 HOH HOH . D 4 HOH A 73 476 73 HOH HOH . D 4 HOH A 74 477 74 HOH HOH . D 4 HOH A 75 478 75 HOH HOH . D 4 HOH A 76 479 76 HOH HOH . D 4 HOH A 77 480 77 HOH HOH . D 4 HOH A 78 481 78 HOH HOH . D 4 HOH A 79 482 79 HOH HOH . D 4 HOH A 80 483 80 HOH HOH . D 4 HOH A 81 484 81 HOH HOH . D 4 HOH A 82 485 82 HOH HOH . D 4 HOH A 83 486 83 HOH HOH . D 4 HOH A 84 487 84 HOH HOH . D 4 HOH A 85 488 85 HOH HOH . D 4 HOH A 86 489 86 HOH HOH . D 4 HOH A 87 490 87 HOH HOH . D 4 HOH A 88 491 88 HOH HOH . D 4 HOH A 89 492 89 HOH HOH . D 4 HOH A 90 493 90 HOH HOH . D 4 HOH A 91 494 91 HOH HOH . D 4 HOH A 92 495 92 HOH HOH . D 4 HOH A 93 496 93 HOH HOH . D 4 HOH A 94 497 94 HOH HOH . D 4 HOH A 95 498 95 HOH HOH . D 4 HOH A 96 499 96 HOH HOH . D 4 HOH A 97 500 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 69.17 0.677 18.839 0.5 21.91 ? C1 GOL 402 A 1 HETATM 2 O O1 GOL . . . B 2 70.05 1.649 19.434 0.5 22.43 ? O1 GOL 402 A 1 HETATM 3 C C2 GOL . . . B 2 67.666 0.861 19.151 0.5 21.99 ? C2 GOL 402 A 1 HETATM 4 O O2 GOL . . . B 2 67.225 0.164 20.321 0.5 23.32 ? O2 GOL 402 A 1 HETATM 5 C C3 GOL . . . B 2 66.86 0.291 17.998 0.5 17.43 ? C3 GOL 402 A 1 HETATM 6 O O3 GOL . A . B 2 67.781 -0.56 17.368 0.25 12.19 ? O3 GOL 402 A 1 HETATM 7 O O3 GOL . B . B 2 65.527 0.782 18.042 0.25 11.18 ? O3 GOL 402 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #