data_3FN8 # _model_server_result.job_id 7rZ7LI1GwKoQrANbAHasqg _model_server_result.datetime_utc '2024-11-10 01:30:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fn8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":222}' # _entry.id 3FN8 # _exptl.entry_id 3FN8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.16 _cell.angle_gamma 90 _cell.entry_id 3FN8 _cell.length_a 38.638 _cell.length_b 88.972 _cell.length_c 54.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FN8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3FN8 _atom_sites.fract_transf_matrix[1][1] 0.025881 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00325 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HG A 1 221 1 HG HG . D 3 GOL A 1 222 1 GOL GOL . E 2 HG B 1 221 2 HG HG . F 3 GOL B 1 222 2 GOL GOL . G 4 HOH A 1 224 5 HOH HOH . G 4 HOH A 2 225 6 HOH HOH . G 4 HOH A 3 226 226 HOH HOH . G 4 HOH A 4 227 227 HOH HOH . G 4 HOH A 5 228 228 HOH HOH . G 4 HOH A 6 229 19 HOH HOH . G 4 HOH A 7 230 9 HOH HOH . G 4 HOH A 8 231 10 HOH HOH . G 4 HOH A 9 232 232 HOH HOH . G 4 HOH A 10 233 20 HOH HOH . G 4 HOH A 11 234 12 HOH HOH . G 4 HOH A 12 235 13 HOH HOH . G 4 HOH A 13 236 23 HOH HOH . G 4 HOH A 14 237 44 HOH HOH . G 4 HOH A 15 238 28 HOH HOH . G 4 HOH A 16 239 239 HOH HOH . G 4 HOH A 17 240 24 HOH HOH . G 4 HOH A 18 241 30 HOH HOH . G 4 HOH A 19 242 242 HOH HOH . G 4 HOH A 20 243 31 HOH HOH . G 4 HOH A 21 244 32 HOH HOH . G 4 HOH A 22 245 245 HOH HOH . G 4 HOH A 23 246 47 HOH HOH . G 4 HOH A 24 247 45 HOH HOH . G 4 HOH A 25 248 53 HOH HOH . G 4 HOH A 26 249 36 HOH HOH . G 4 HOH A 27 250 37 HOH HOH . G 4 HOH A 28 251 38 HOH HOH . G 4 HOH A 29 252 252 HOH HOH . G 4 HOH A 30 253 39 HOH HOH . G 4 HOH A 31 254 63 HOH HOH . G 4 HOH A 32 255 93 HOH HOH . G 4 HOH A 33 256 256 HOH HOH . G 4 HOH A 34 257 257 HOH HOH . G 4 HOH A 35 258 258 HOH HOH . G 4 HOH A 36 259 94 HOH HOH . G 4 HOH A 37 260 260 HOH HOH . G 4 HOH A 38 261 261 HOH HOH . G 4 HOH A 39 262 262 HOH HOH . G 4 HOH A 40 263 263 HOH HOH . G 4 HOH A 41 264 67 HOH HOH . G 4 HOH A 42 265 97 HOH HOH . G 4 HOH A 43 266 98 HOH HOH . G 4 HOH A 44 267 267 HOH HOH . G 4 HOH A 45 268 99 HOH HOH . G 4 HOH A 46 269 70 HOH HOH . G 4 HOH A 47 270 270 HOH HOH . G 4 HOH A 48 271 271 HOH HOH . G 4 HOH A 49 272 272 HOH HOH . G 4 HOH A 50 273 273 HOH HOH . G 4 HOH A 51 274 74 HOH HOH . G 4 HOH A 52 275 103 HOH HOH . G 4 HOH A 53 276 76 HOH HOH . G 4 HOH A 54 277 105 HOH HOH . G 4 HOH A 55 278 106 HOH HOH . G 4 HOH A 56 279 107 HOH HOH . G 4 HOH A 57 280 280 HOH HOH . G 4 HOH A 58 281 79 HOH HOH . G 4 HOH A 59 282 81 HOH HOH . G 4 HOH A 60 283 283 HOH HOH . G 4 HOH A 61 284 284 HOH HOH . G 4 HOH A 62 285 86 HOH HOH . G 4 HOH A 63 286 286 HOH HOH . G 4 HOH A 64 287 287 HOH HOH . G 4 HOH A 65 288 288 HOH HOH . G 4 HOH A 66 289 171 HOH HOH . G 4 HOH A 67 290 290 HOH HOH . G 4 HOH A 68 291 90 HOH HOH . G 4 HOH A 69 292 114 HOH HOH . G 4 HOH A 70 293 121 HOH HOH . G 4 HOH A 71 294 176 HOH HOH . G 4 HOH A 72 295 123 HOH HOH . G 4 HOH A 73 296 125 HOH HOH . G 4 HOH A 74 297 142 HOH HOH . G 4 HOH A 75 298 148 HOH HOH . G 4 HOH A 76 299 182 HOH HOH . G 4 HOH A 77 300 120 HOH HOH . G 4 HOH A 78 301 301 HOH HOH . G 4 HOH A 79 302 151 HOH HOH . G 4 HOH A 80 303 122 HOH HOH . G 4 HOH A 81 304 304 HOH HOH . G 4 HOH A 82 305 187 HOH HOH . G 4 HOH A 83 306 192 HOH HOH . G 4 HOH A 84 307 194 HOH HOH . G 4 HOH A 85 308 308 HOH HOH . G 4 HOH A 86 309 196 HOH HOH . G 4 HOH A 87 310 199 HOH HOH . G 4 HOH A 88 311 200 HOH HOH . G 4 HOH A 89 312 202 HOH HOH . G 4 HOH A 90 313 203 HOH HOH . G 4 HOH A 91 314 314 HOH HOH . G 4 HOH A 92 315 315 HOH HOH . G 4 HOH A 93 316 156 HOH HOH . G 4 HOH A 94 318 318 HOH HOH . G 4 HOH A 95 319 214 HOH HOH . G 4 HOH A 96 320 217 HOH HOH . G 4 HOH A 97 321 221 HOH HOH . G 4 HOH A 98 324 136 HOH HOH . G 4 HOH A 99 325 325 HOH HOH . G 4 HOH A 100 328 328 HOH HOH . G 4 HOH A 101 329 140 HOH HOH . G 4 HOH A 102 331 331 HOH HOH . G 4 HOH A 103 332 143 HOH HOH . G 4 HOH A 104 334 146 HOH HOH . G 4 HOH A 105 335 335 HOH HOH . G 4 HOH A 106 336 149 HOH HOH . G 4 HOH A 107 339 339 HOH HOH . G 4 HOH A 108 340 340 HOH HOH . G 4 HOH A 109 342 154 HOH HOH . G 4 HOH A 110 343 343 HOH HOH . G 4 HOH A 111 350 160 HOH HOH . G 4 HOH A 112 353 353 HOH HOH . G 4 HOH A 113 354 354 HOH HOH . G 4 HOH A 114 359 359 HOH HOH . G 4 HOH A 115 360 360 HOH HOH . G 4 HOH A 116 364 364 HOH HOH . G 4 HOH A 117 365 365 HOH HOH . G 4 HOH A 118 366 366 HOH HOH . G 4 HOH A 119 367 367 HOH HOH . G 4 HOH A 120 372 372 HOH HOH . G 4 HOH A 121 373 373 HOH HOH . G 4 HOH A 122 375 375 HOH HOH . G 4 HOH A 123 377 377 HOH HOH . G 4 HOH A 124 381 381 HOH HOH . G 4 HOH A 125 383 383 HOH HOH . G 4 HOH A 126 385 385 HOH HOH . G 4 HOH A 127 387 387 HOH HOH . G 4 HOH A 128 398 398 HOH HOH . G 4 HOH A 129 399 399 HOH HOH . G 4 HOH A 130 400 400 HOH HOH . G 4 HOH A 131 401 401 HOH HOH . H 4 HOH B 1 223 4 HOH HOH . H 4 HOH B 2 224 224 HOH HOH . H 4 HOH B 3 225 225 HOH HOH . H 4 HOH B 4 226 15 HOH HOH . H 4 HOH B 5 227 16 HOH HOH . H 4 HOH B 6 228 17 HOH HOH . H 4 HOH B 7 229 8 HOH HOH . H 4 HOH B 8 230 230 HOH HOH . H 4 HOH B 9 231 231 HOH HOH . H 4 HOH B 10 232 14 HOH HOH . H 4 HOH B 11 233 11 HOH HOH . H 4 HOH B 12 234 229 HOH HOH . H 4 HOH B 13 235 235 HOH HOH . H 4 HOH B 14 236 26 HOH HOH . H 4 HOH B 15 237 27 HOH HOH . H 4 HOH B 16 238 22 HOH HOH . H 4 HOH B 17 239 233 HOH HOH . H 4 HOH B 18 240 29 HOH HOH . H 4 HOH B 19 241 241 HOH HOH . H 4 HOH B 20 242 41 HOH HOH . H 4 HOH B 21 243 243 HOH HOH . H 4 HOH B 22 244 42 HOH HOH . H 4 HOH B 23 245 21 HOH HOH . H 4 HOH B 24 246 33 HOH HOH . H 4 HOH B 25 247 34 HOH HOH . H 4 HOH B 26 248 35 HOH HOH . H 4 HOH B 27 249 237 HOH HOH . H 4 HOH B 28 250 48 HOH HOH . H 4 HOH B 29 251 49 HOH HOH . H 4 HOH B 30 252 50 HOH HOH . H 4 HOH B 31 253 52 HOH HOH . H 4 HOH B 32 254 40 HOH HOH . H 4 HOH B 33 255 246 HOH HOH . H 4 HOH B 34 256 54 HOH HOH . H 4 HOH B 35 257 56 HOH HOH . H 4 HOH B 36 258 59 HOH HOH . H 4 HOH B 37 259 259 HOH HOH . H 4 HOH B 38 260 60 HOH HOH . H 4 HOH B 39 261 61 HOH HOH . H 4 HOH B 40 262 62 HOH HOH . H 4 HOH B 41 263 46 HOH HOH . H 4 HOH B 42 264 95 HOH HOH . H 4 HOH B 43 265 66 HOH HOH . H 4 HOH B 44 266 254 HOH HOH . H 4 HOH B 45 267 264 HOH HOH . H 4 HOH B 46 268 71 HOH HOH . H 4 HOH B 47 269 100 HOH HOH . H 4 HOH B 48 270 73 HOH HOH . H 4 HOH B 49 271 72 HOH HOH . H 4 HOH B 50 272 75 HOH HOH . H 4 HOH B 51 273 77 HOH HOH . H 4 HOH B 52 274 102 HOH HOH . H 4 HOH B 53 275 275 HOH HOH . H 4 HOH B 54 276 104 HOH HOH . H 4 HOH B 55 277 78 HOH HOH . H 4 HOH B 56 278 80 HOH HOH . H 4 HOH B 57 279 279 HOH HOH . H 4 HOH B 58 280 82 HOH HOH . H 4 HOH B 59 281 108 HOH HOH . H 4 HOH B 60 282 109 HOH HOH . H 4 HOH B 61 283 83 HOH HOH . H 4 HOH B 62 284 282 HOH HOH . H 4 HOH B 63 285 110 HOH HOH . H 4 HOH B 64 286 89 HOH HOH . H 4 HOH B 65 287 87 HOH HOH . H 4 HOH B 66 288 111 HOH HOH . H 4 HOH B 67 289 289 HOH HOH . H 4 HOH B 68 290 91 HOH HOH . H 4 HOH B 69 291 172 HOH HOH . H 4 HOH B 70 292 173 HOH HOH . H 4 HOH B 71 293 174 HOH HOH . H 4 HOH B 72 294 116 HOH HOH . H 4 HOH B 73 295 177 HOH HOH . H 4 HOH B 74 296 179 HOH HOH . H 4 HOH B 75 297 180 HOH HOH . H 4 HOH B 76 298 181 HOH HOH . H 4 HOH B 77 299 299 HOH HOH . H 4 HOH B 78 300 183 HOH HOH . H 4 HOH B 79 301 113 HOH HOH . H 4 HOH B 80 302 185 HOH HOH . H 4 HOH B 81 303 186 HOH HOH . H 4 HOH B 82 304 293 HOH HOH . H 4 HOH B 83 305 124 HOH HOH . H 4 HOH B 84 306 306 HOH HOH . H 4 HOH B 85 307 295 HOH HOH . H 4 HOH B 86 308 126 HOH HOH . H 4 HOH B 87 309 309 HOH HOH . H 4 HOH B 88 310 127 HOH HOH . H 4 HOH B 89 311 128 HOH HOH . H 4 HOH B 90 312 312 HOH HOH . H 4 HOH B 91 313 313 HOH HOH . H 4 HOH B 92 314 129 HOH HOH . H 4 HOH B 93 315 130 HOH HOH . H 4 HOH B 94 316 208 HOH HOH . H 4 HOH B 95 317 209 HOH HOH . H 4 HOH B 96 318 131 HOH HOH . H 4 HOH B 97 319 319 HOH HOH . H 4 HOH B 98 320 320 HOH HOH . H 4 HOH B 99 321 134 HOH HOH . H 4 HOH B 100 322 135 HOH HOH . H 4 HOH B 101 323 323 HOH HOH . H 4 HOH B 102 324 296 HOH HOH . H 4 HOH B 103 325 297 HOH HOH . H 4 HOH B 104 326 326 HOH HOH . H 4 HOH B 105 327 137 HOH HOH . H 4 HOH B 106 328 138 HOH HOH . H 4 HOH B 107 329 117 HOH HOH . H 4 HOH B 108 330 141 HOH HOH . H 4 HOH B 109 331 302 HOH HOH . H 4 HOH B 110 332 316 HOH HOH . H 4 HOH B 111 333 145 HOH HOH . H 4 HOH B 112 334 317 HOH HOH . H 4 HOH B 113 337 337 HOH HOH . H 4 HOH B 114 338 150 HOH HOH . H 4 HOH B 115 340 153 HOH HOH . H 4 HOH B 116 341 341 HOH HOH . H 4 HOH B 117 344 157 HOH HOH . H 4 HOH B 118 345 158 HOH HOH . H 4 HOH B 119 346 346 HOH HOH . H 4 HOH B 120 347 159 HOH HOH . H 4 HOH B 121 348 348 HOH HOH . H 4 HOH B 122 349 349 HOH HOH . H 4 HOH B 123 351 163 HOH HOH . H 4 HOH B 124 352 165 HOH HOH . H 4 HOH B 125 353 167 HOH HOH . H 4 HOH B 126 354 212 HOH HOH . H 4 HOH B 127 355 355 HOH HOH . H 4 HOH B 128 356 356 HOH HOH . H 4 HOH B 129 357 213 HOH HOH . H 4 HOH B 130 358 218 HOH HOH . H 4 HOH B 131 359 222 HOH HOH . H 4 HOH B 132 362 362 HOH HOH . H 4 HOH B 133 363 363 HOH HOH . H 4 HOH B 134 368 368 HOH HOH . H 4 HOH B 135 369 369 HOH HOH . H 4 HOH B 136 371 371 HOH HOH . H 4 HOH B 137 374 374 HOH HOH . H 4 HOH B 138 378 378 HOH HOH . H 4 HOH B 139 379 379 HOH HOH . H 4 HOH B 140 380 380 HOH HOH . H 4 HOH B 141 382 382 HOH HOH . H 4 HOH B 142 384 384 HOH HOH . H 4 HOH B 143 386 386 HOH HOH . H 4 HOH B 144 388 388 HOH HOH . H 4 HOH B 145 389 389 HOH HOH . H 4 HOH B 146 391 391 HOH HOH . H 4 HOH B 147 392 392 HOH HOH . H 4 HOH B 148 393 393 HOH HOH . H 4 HOH B 149 394 394 HOH HOH . H 4 HOH B 150 395 395 HOH HOH . H 4 HOH B 151 396 396 HOH HOH . H 4 HOH B 152 397 397 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 27.048 35.904 43.914 1 90.25 ? C1 GOL 222 A 1 HETATM 2 O O1 GOL . . . D 3 26.698 36.727 42.825 1 89.95 ? O1 GOL 222 A 1 HETATM 3 C C2 GOL . . . D 3 26.163 36.247 45.106 1 90.78 ? C2 GOL 222 A 1 HETATM 4 O O2 GOL . . . D 3 24.991 35.463 45.056 1 91.07 ? O2 GOL 222 A 1 HETATM 5 C C3 GOL . . . D 3 26.917 35.96 46.401 1 90.45 ? C3 GOL 222 A 1 HETATM 6 O O3 GOL . . . D 3 27.66 37.098 46.778 1 90.11 ? O3 GOL 222 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #