data_3FO0
#
_model_server_result.job_id            Q8xm8V2oDqfH3na8gPFKAQ 
_model_server_result.datetime_utc      '2025-01-10 13:52:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3fo0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    3FO0 
#
_exptl.entry_id    3FO0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              262.265 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-[(2-AMINO-1H-BENZIMIDAZOL-6-YL)AMINO]-5-OXOPENTANOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3FO0 
_cell.length_a            84.071 
_cell.length_b            87.001 
_cell.length_c            59.419 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3FO0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
disulf ? disulf2 A SG CYS 139 L CYS 139 1_555 A SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf4 B SG CYS 148 H CYS 148 1_555 B SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
#
_chem_comp.formula           'C12 H14 N4 O3' 
_chem_comp.formula_weight    262.265 
_chem_comp.id                BZH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-[(2-AMINO-1H-BENZIMIDAZOL-6-YL)AMINO]-5-OXOPENTANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C7 BZH doub 70 n y 
C8 C9 BZH sing 71 n y 
C8 H8 BZH sing 72 n n 
C9 N1 BZH sing 73 n y 
C9 C4 BZH doub 74 n y 
N1 C2 BZH sing 75 n y 
N1 HN1 BZH sing 76 n n 
C2 N10 BZH sing 77 n n 
C2 N3 BZH doub 78 n y 
N10 H101 BZH sing 79 n n 
N10 H102 BZH sing 80 n n 
N3 C4 BZH sing 81 n y 
C4 C5 BZH sing 82 n y 
C5 C6 BZH doub 83 n y 
C5 H5 BZH sing 84 n n 
C6 C7 BZH sing 85 n y 
C6 H6 BZH sing 86 n n 
C7 N11 BZH sing 87 n n 
N11 C12 BZH sing 88 n n 
N11 HN11 BZH sing 89 n n 
C12 C13 BZH sing 90 n n 
C12 O19 BZH doub 91 n n 
C13 C14 BZH sing 92 n n 
C13 H131 BZH sing 93 n n 
C13 H132 BZH sing 94 n n 
C14 C15 BZH sing 95 n n 
C14 H141 BZH sing 96 n n 
C14 H142 BZH sing 97 n n 
C15 C16 BZH sing 98 n n 
C15 H151 BZH sing 99 n n 
C15 H152 BZH sing 100 n n 
C16 O17 BZH doub 101 n n 
C16 O18 BZH sing 102 n n 
O18 HO18 BZH sing 103 n n 
#
_atom_sites.entry_id                     3FO0 
_atom_sites.fract_transf_matrix[1][1]    0.011895 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011494 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01683 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 BZH H 1 401 401 BZH BZH . 
D 4 GOL H 1 501 501 GOL GOL . 
E 5 HOH L 1 220 4 HOH HOH . 
E 5 HOH L 2 221 6 HOH HOH . 
E 5 HOH L 3 222 7 HOH HOH . 
E 5 HOH L 4 223 8 HOH HOH . 
E 5 HOH L 5 224 9 HOH HOH . 
E 5 HOH L 6 225 10 HOH HOH . 
E 5 HOH L 7 226 12 HOH HOH . 
E 5 HOH L 8 227 13 HOH HOH . 
E 5 HOH L 9 228 14 HOH HOH . 
E 5 HOH L 10 229 15 HOH HOH . 
E 5 HOH L 11 230 17 HOH HOH . 
E 5 HOH L 12 231 18 HOH HOH . 
E 5 HOH L 13 232 20 HOH HOH . 
E 5 HOH L 14 233 21 HOH HOH . 
E 5 HOH L 15 234 23 HOH HOH . 
E 5 HOH L 16 235 26 HOH HOH . 
E 5 HOH L 17 236 27 HOH HOH . 
E 5 HOH L 18 237 30 HOH HOH . 
E 5 HOH L 19 238 32 HOH HOH . 
E 5 HOH L 20 239 34 HOH HOH . 
E 5 HOH L 21 240 38 HOH HOH . 
E 5 HOH L 22 241 42 HOH HOH . 
E 5 HOH L 23 242 44 HOH HOH . 
E 5 HOH L 24 243 45 HOH HOH . 
E 5 HOH L 25 244 46 HOH HOH . 
E 5 HOH L 26 245 47 HOH HOH . 
E 5 HOH L 27 246 48 HOH HOH . 
F 5 HOH H 1 230 1 HOH HOH . 
F 5 HOH H 2 231 2 HOH HOH . 
F 5 HOH H 3 232 3 HOH HOH . 
F 5 HOH H 4 233 5 HOH HOH . 
F 5 HOH H 5 234 11 HOH HOH . 
F 5 HOH H 6 235 16 HOH HOH . 
F 5 HOH H 7 236 19 HOH HOH . 
F 5 HOH H 8 237 22 HOH HOH . 
F 5 HOH H 9 238 24 HOH HOH . 
F 5 HOH H 10 239 25 HOH HOH . 
F 5 HOH H 11 240 28 HOH HOH . 
F 5 HOH H 12 241 29 HOH HOH . 
F 5 HOH H 13 242 31 HOH HOH . 
F 5 HOH H 14 243 33 HOH HOH . 
F 5 HOH H 15 244 35 HOH HOH . 
F 5 HOH H 16 245 36 HOH HOH . 
F 5 HOH H 17 246 37 HOH HOH . 
F 5 HOH H 18 247 39 HOH HOH . 
F 5 HOH H 19 248 40 HOH HOH . 
F 5 HOH H 20 249 41 HOH HOH . 
F 5 HOH H 21 250 43 HOH HOH . 
F 5 HOH H 22 251 49 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C8 BZH . . . C 3 19.186 4.264 -35.602 1 45.27 ? C8 BZH 401 H 1 
HETATM 2 C C9 BZH . . . C 3 19.425 3.419 -34.534 1 46.03 ? C9 BZH 401 H 1 
HETATM 3 N N1 BZH . . . C 3 19.586 2.1 -34.459 1 45.55 ? N1 BZH 401 H 1 
HETATM 4 C C2 BZH . . . C 3 19.791 1.82 -33.18 1 44.82 ? C2 BZH 401 H 1 
HETATM 5 N N10 BZH . . . C 3 19.988 0.592 -32.737 1 44.61 ? N10 BZH 401 H 1 
HETATM 6 N N3 BZH . . . C 3 19.764 2.912 -32.419 1 44.68 ? N3 BZH 401 H 1 
HETATM 7 C C4 BZH . . . C 3 19.528 3.936 -33.243 1 46.67 ? C4 BZH 401 H 1 
HETATM 8 C C5 BZH . . . C 3 19.395 5.317 -33.043 1 47.36 ? C5 BZH 401 H 1 
HETATM 9 C C6 BZH . . . C 3 19.149 6.162 -34.13 1 46.57 ? C6 BZH 401 H 1 
HETATM 10 C C7 BZH . . . C 3 19.037 5.632 -35.413 1 46.47 ? C7 BZH 401 H 1 
HETATM 11 N N11 BZH . . . C 3 18.805 6.381 -36.507 1 48.32 ? N11 BZH 401 H 1 
HETATM 12 C C12 BZH . . . C 3 18.947 7.709 -36.617 1 50.97 ? C12 BZH 401 H 1 
HETATM 13 O O19 BZH . . . C 3 19.291 8.482 -35.723 1 50.83 ? O19 BZH 401 H 1 
HETATM 14 C C13 BZH . . . C 3 18.631 8.253 -38.003 1 53.06 ? C13 BZH 401 H 1 
HETATM 15 C C14 BZH . . . C 3 19.411 9.52 -38.33 1 53.28 ? C14 BZH 401 H 1 
HETATM 16 C C15 BZH . . . C 3 19.14 9.862 -39.781 1 56.83 ? C15 BZH 401 H 1 
HETATM 17 C C16 BZH . . . C 3 19.938 11.087 -40.228 1 59.18 ? C16 BZH 401 H 1 
HETATM 18 O O18 BZH . . . C 3 19.344 12.19 -40.104 1 59.86 ? O18 BZH 401 H 1 
HETATM 19 O O17 BZH . . . C 3 21.102 10.888 -40.68 1 57.96 ? O17 BZH 401 H 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           19 
#