data_3FQE # _model_server_result.job_id 8OFOsOr8j1fLVQqxfoRHig _model_server_result.datetime_utc '2024-11-05 12:41:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3fqe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3FQE # _exptl.entry_id 3FQE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.423 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-[(3-methylphenyl)amino]pyrimidine-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FQE _cell.length_a 39.782 _cell.length_b 84.974 _cell.length_c 90.148 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FQE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H24 N6 O' _chem_comp.formula_weight 340.423 _chem_comp.id P5C _chem_comp.mon_nstd_flag . _chem_comp.name 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-[(3-methylphenyl)amino]pyrimidine-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 N1 P5C doub 237 n y C2 N5 P5C sing 238 n y C2 N7 P5C sing 239 n n C3 C4 P5C sing 240 n y C3 N5 P5C doub 241 n y N1 C6 P5C sing 242 n y C4 C6 P5C doub 243 n y C4 C8 P5C sing 244 n n C6 N11 P5C sing 245 n n C8 O10 P5C doub 246 n n C8 N9 P5C sing 247 n n C12 C13 P5C doub 248 n y C12 C17 P5C sing 249 n y C12 N11 P5C sing 250 n n C13 C16 P5C sing 251 n y C14 C15 P5C sing 252 n y C14 C16 P5C doub 253 n y C15 C17 P5C doub 254 n y C15 C18 P5C sing 255 n n N7 C19 P5C sing 256 n n C19 C24 P5C sing 257 n n C19 C20 P5C sing 258 n n C24 N25 P5C sing 259 n n C24 C23 P5C sing 260 n n C23 C22 P5C sing 261 n n C22 C21 P5C sing 262 n n C21 C20 P5C sing 263 n n C3 H3 P5C sing 264 n n C13 H13 P5C sing 265 n n C14 H14 P5C sing 266 n n C16 H16 P5C sing 267 n n C17 H17 P5C sing 268 n n C18 H18 P5C sing 269 n n C18 H18A P5C sing 270 n n C18 H18B P5C sing 271 n n N9 HN9 P5C sing 272 n n N9 HN9A P5C sing 273 n n N11 HN11 P5C sing 274 n n N7 HN7 P5C sing 275 n n C19 H19 P5C sing 276 n n C24 H24 P5C sing 277 n n N25 HN25 P5C sing 278 n n N25 HN2A P5C sing 279 n n C23 H23 P5C sing 280 n n C23 H23A P5C sing 281 n n C22 H22 P5C sing 282 n n C22 H22A P5C sing 283 n n C21 H21 P5C sing 284 n n C21 H21A P5C sing 285 n n C20 H20 P5C sing 286 n n C20 H20A P5C sing 287 n n # _atom_sites.entry_id 3FQE _atom_sites.fract_transf_matrix[1][1] 0.025137 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P5C A 1 1 1 P5C P5C . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1005 1005 HOH HOH . C 3 HOH A 5 1006 1006 HOH HOH . C 3 HOH A 6 1007 1007 HOH HOH . C 3 HOH A 7 1008 1008 HOH HOH . C 3 HOH A 8 1013 1013 HOH HOH . C 3 HOH A 9 1014 1014 HOH HOH . C 3 HOH A 10 1015 1015 HOH HOH . C 3 HOH A 11 1016 1016 HOH HOH . C 3 HOH A 12 1017 1017 HOH HOH . C 3 HOH A 13 1019 1019 HOH HOH . C 3 HOH A 14 1020 1020 HOH HOH . C 3 HOH A 15 1021 1021 HOH HOH . C 3 HOH A 16 1023 1023 HOH HOH . C 3 HOH A 17 1027 1027 HOH HOH . C 3 HOH A 18 1030 1030 HOH HOH . C 3 HOH A 19 1042 1042 HOH HOH . C 3 HOH A 20 1047 1047 HOH HOH . C 3 HOH A 21 1048 1048 HOH HOH . C 3 HOH A 22 1055 1055 HOH HOH . C 3 HOH A 23 1061 1061 HOH HOH . C 3 HOH A 24 1073 1073 HOH HOH . C 3 HOH A 25 2001 2001 HOH HOH . C 3 HOH A 26 2002 2002 HOH HOH . C 3 HOH A 27 2003 2003 HOH HOH . C 3 HOH A 28 2004 2004 HOH HOH . C 3 HOH A 29 2005 2005 HOH HOH . C 3 HOH A 30 2007 2007 HOH HOH . C 3 HOH A 31 2013 2013 HOH HOH . C 3 HOH A 32 2015 2015 HOH HOH . C 3 HOH A 33 2017 2017 HOH HOH . C 3 HOH A 34 2018 2018 HOH HOH . C 3 HOH A 35 2022 2022 HOH HOH . C 3 HOH A 36 2026 2026 HOH HOH . C 3 HOH A 37 2027 2027 HOH HOH . C 3 HOH A 38 2029 2029 HOH HOH . C 3 HOH A 39 2030 2030 HOH HOH . C 3 HOH A 40 2032 2032 HOH HOH . C 3 HOH A 41 2035 2035 HOH HOH . C 3 HOH A 42 2039 2039 HOH HOH . C 3 HOH A 43 2041 2041 HOH HOH . C 3 HOH A 44 2043 2043 HOH HOH . C 3 HOH A 45 2047 2047 HOH HOH . C 3 HOH A 46 2055 2055 HOH HOH . C 3 HOH A 47 2063 2063 HOH HOH . C 3 HOH A 48 2067 2067 HOH HOH . C 3 HOH A 49 2072 2072 HOH HOH . C 3 HOH A 50 2074 2074 HOH HOH . C 3 HOH A 51 2075 2075 HOH HOH . C 3 HOH A 52 2083 2083 HOH HOH . C 3 HOH A 53 2084 2084 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 P5C . . . B 2 3.533 2.684 13.505 1 20.5 ? C2 P5C 1 A 1 HETATM 2 C C3 P5C . . . B 2 5.305 1.783 14.732 1 21.36 ? C3 P5C 1 A 1 HETATM 3 N N1 P5C . . . B 2 2.788 1.591 13.806 1 21.41 ? N1 P5C 1 A 1 HETATM 4 C C4 P5C . . . B 2 4.55 0.652 15.057 1 20.64 ? C4 P5C 1 A 1 HETATM 5 C C6 P5C . . . B 2 3.254 0.564 14.573 1 20.75 ? C6 P5C 1 A 1 HETATM 6 C C8 P5C . . . B 2 5.153 -0.433 15.914 1 21.06 ? C8 P5C 1 A 1 HETATM 7 C C12 P5C . . . B 2 1.187 -0.755 14.518 1 21.16 ? C12 P5C 1 A 1 HETATM 8 C C13 P5C . . . B 2 0.52 -0.025 13.526 1 21.9 ? C13 P5C 1 A 1 HETATM 9 C C14 P5C . . . B 2 -1.496 -1.303 13.877 1 22.21 ? C14 P5C 1 A 1 HETATM 10 C C15 P5C . . . B 2 -0.839 -2.039 14.861 1 21.99 ? C15 P5C 1 A 1 HETATM 11 C C16 P5C . . . B 2 -0.815 -0.285 13.202 1 22.2 ? C16 P5C 1 A 1 HETATM 12 C C17 P5C . . . B 2 0.491 -1.764 15.182 1 21.36 ? C17 P5C 1 A 1 HETATM 13 C C18 P5C . . . B 2 -1.567 -3.15 15.579 1 22.78 ? C18 P5C 1 A 1 HETATM 14 O O10 P5C . . . B 2 4.509 -1.429 16.227 1 20.63 ? O10 P5C 1 A 1 HETATM 15 N N9 P5C . . . B 2 6.406 -0.278 16.326 1 20.86 ? N9 P5C 1 A 1 HETATM 16 N N11 P5C . . . B 2 2.488 -0.528 14.871 1 21.22 ? N11 P5C 1 A 1 HETATM 17 N N5 P5C . . . B 2 4.796 2.772 13.971 1 20.59 ? N5 P5C 1 A 1 HETATM 18 N N7 P5C . . . B 2 3.025 3.684 12.743 1 20.7 ? N7 P5C 1 A 1 HETATM 19 C C19 P5C . . . B 2 1.623 3.736 12.347 1 20.66 ? C19 P5C 1 A 1 HETATM 20 C C24 P5C . . . B 2 0.733 4.398 13.423 1 20.34 ? C24 P5C 1 A 1 HETATM 21 N N25 P5C . . . B 2 1.173 5.759 13.705 1 20.14 ? N25 P5C 1 A 1 HETATM 22 C C23 P5C . . . B 2 -0.727 4.442 12.971 1 19.86 ? C23 P5C 1 A 1 HETATM 23 C C22 P5C . . . B 2 -0.888 5.107 11.595 1 18.35 ? C22 P5C 1 A 1 HETATM 24 C C21 P5C . . . B 2 0.033 4.518 10.526 1 18.27 ? C21 P5C 1 A 1 HETATM 25 C C20 P5C . . . B 2 1.493 4.439 10.986 1 19.3 ? C20 P5C 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #