data_3FRP # _model_server_result.job_id va0tF13gL9JzGS7Y235Glw _model_server_result.datetime_utc '2024-12-14 20:36:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3frp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":628}' # _entry.id 3FRP # _exptl.entry_id 3FRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3FRP _cell.length_a 134.138 _cell.length_b 151.141 _cell.length_c 76.787 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3FRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 522 A CYS 522 1_555 B SG CYS 69 G CYS 779 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf2 A SG CYS 587 A CYS 587 1_555 A SG CYS 622 A CYS 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf3 B SG CYS 125 G CYS 835 1_555 C SG CYS 229 B CYS 1470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf4 C SG CYS 77 B CYS 1318 1_555 C SG CYS 205 B CYS 1446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 C SG CYS 105 B CYS 1346 1_555 C SG CYS 174 B CYS 1415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 C SG CYS 222 B CYS 1463 1_555 C SG CYS 227 B CYS 1468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf7 C SG CYS 234 B CYS 1475 1_555 C SG CYS 306 B CYS 1547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf8 C SG CYS 253 B CYS 1494 1_555 C SG CYS 377 B CYS 1618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf9 C SG CYS 353 B CYS 1594 1_555 C SG CYS 362 B CYS 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 A O PRO 494 A PRO 494 1_555 D CA CA . A CA 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc2 A OD1 ASP 517 A ASP 517 1_555 D CA CA . A CA 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 A O VAL 518 A VAL 518 1_555 D CA CA . A CA 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc4 A OD1 ASP 520 A ASP 520 1_555 D CA CA . A CA 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc5 D CA CA . A CA 628 1_555 E O HOH . A HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3FRP _atom_sites.fract_transf_matrix[1][1] 0.007455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA A 1 628 1 CA CA . E 5 HOH A 1 629 2 HOH HOH . E 5 HOH A 2 630 3 HOH HOH . E 5 HOH A 3 631 5 HOH HOH . E 5 HOH A 4 632 12 HOH HOH . E 5 HOH A 5 633 15 HOH HOH . E 5 HOH A 6 634 16 HOH HOH . E 5 HOH A 7 635 17 HOH HOH . E 5 HOH A 8 636 18 HOH HOH . E 5 HOH A 9 637 19 HOH HOH . E 5 HOH A 10 638 20 HOH HOH . E 5 HOH A 11 639 23 HOH HOH . E 5 HOH A 12 640 26 HOH HOH . E 5 HOH A 13 641 28 HOH HOH . E 5 HOH A 14 642 29 HOH HOH . E 5 HOH A 15 643 32 HOH HOH . E 5 HOH A 16 644 33 HOH HOH . E 5 HOH A 17 645 34 HOH HOH . E 5 HOH A 18 646 37 HOH HOH . E 5 HOH A 19 647 38 HOH HOH . E 5 HOH A 20 648 39 HOH HOH . E 5 HOH A 21 649 40 HOH HOH . E 5 HOH A 22 650 41 HOH HOH . E 5 HOH A 23 651 42 HOH HOH . E 5 HOH A 24 652 43 HOH HOH . E 5 HOH A 25 653 44 HOH HOH . E 5 HOH A 26 654 45 HOH HOH . E 5 HOH A 27 655 48 HOH HOH . E 5 HOH A 28 656 49 HOH HOH . E 5 HOH A 29 657 50 HOH HOH . E 5 HOH A 30 658 51 HOH HOH . E 5 HOH A 31 659 52 HOH HOH . E 5 HOH A 32 660 53 HOH HOH . E 5 HOH A 33 661 55 HOH HOH . E 5 HOH A 34 662 56 HOH HOH . E 5 HOH A 35 663 58 HOH HOH . E 5 HOH A 36 664 59 HOH HOH . E 5 HOH A 37 665 60 HOH HOH . E 5 HOH A 38 666 62 HOH HOH . E 5 HOH A 39 667 63 HOH HOH . E 5 HOH A 40 668 64 HOH HOH . E 5 HOH A 41 669 65 HOH HOH . E 5 HOH A 42 670 66 HOH HOH . E 5 HOH A 43 671 67 HOH HOH . E 5 HOH A 44 672 68 HOH HOH . E 5 HOH A 45 673 69 HOH HOH . E 5 HOH A 46 674 75 HOH HOH . E 5 HOH A 47 675 78 HOH HOH . F 5 HOH G 1 4 4 HOH HOH . F 5 HOH G 2 6 6 HOH HOH . F 5 HOH G 3 7 7 HOH HOH . F 5 HOH G 4 8 8 HOH HOH . F 5 HOH G 5 9 9 HOH HOH . F 5 HOH G 6 13 13 HOH HOH . F 5 HOH G 7 14 14 HOH HOH . F 5 HOH G 8 22 22 HOH HOH . F 5 HOH G 9 24 24 HOH HOH . F 5 HOH G 10 25 25 HOH HOH . F 5 HOH G 11 27 27 HOH HOH . F 5 HOH G 12 30 30 HOH HOH . F 5 HOH G 13 31 31 HOH HOH . F 5 HOH G 14 46 46 HOH HOH . F 5 HOH G 15 47 47 HOH HOH . F 5 HOH G 16 54 54 HOH HOH . F 5 HOH G 17 57 57 HOH HOH . F 5 HOH G 18 70 70 HOH HOH . F 5 HOH G 19 76 76 HOH HOH . F 5 HOH G 20 77 77 HOH HOH . G 5 HOH B 1 10 10 HOH HOH . G 5 HOH B 2 11 11 HOH HOH . G 5 HOH B 3 21 21 HOH HOH . G 5 HOH B 4 35 35 HOH HOH . G 5 HOH B 5 36 36 HOH HOH . G 5 HOH B 6 61 61 HOH HOH . G 5 HOH B 7 71 71 HOH HOH . G 5 HOH B 8 72 72 HOH HOH . G 5 HOH B 9 73 73 HOH HOH . G 5 HOH B 10 74 74 HOH HOH . G 5 HOH B 11 79 79 HOH HOH . G 5 HOH B 12 80 80 HOH HOH . G 5 HOH B 13 81 81 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -4.334 _atom_site.Cartn_y 41.882 _atom_site.Cartn_z 20.391 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 628 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #