data_3FS6
#
_model_server_result.job_id            VfbmCVgZtqcAzZ0dj3MbbQ 
_model_server_result.datetime_utc      '2024-11-22 23:03:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3fs6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":187}' 
#
_entry.id    3FS6 
#
_exptl.entry_id    3FS6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              346.381 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,4-DIAMINO-5-[2-METHOXY-5-(4-CARBOXYBUTYLOXY)BENZYL]PYRIMIDINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3FS6 
_cell.length_a            84.098 
_cell.length_b            84.098 
_cell.length_c            78.054 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3FS6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H22 N4 O4' 
_chem_comp.formula_weight    346.381 
_chem_comp.id                DH1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,4-DIAMINO-5-[2-METHOXY-5-(4-CARBOXYBUTYLOXY)BENZYL]PYRIMIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C16 O1 DH1 sing 83 n n 
C16 H161 DH1 sing 84 n n 
C16 H162 DH1 sing 85 n n 
C16 H163 DH1 sing 86 n n 
O1 C2' DH1 sing 87 n n 
C2' C3' DH1 doub 88 n y 
C2' C1' DH1 sing 89 n y 
C3' C4' DH1 sing 90 n y 
C3' H3' DH1 sing 91 n n 
C4' C5' DH1 doub 92 n y 
C4' H4' DH1 sing 93 n n 
C5' O5' DH1 sing 94 n n 
C5' C6' DH1 sing 95 n y 
O5' C52 DH1 sing 96 n n 
C52 C1 DH1 sing 97 n n 
C52 H521 DH1 sing 98 n n 
C52 H522 DH1 sing 99 n n 
C1 C3 DH1 sing 100 n n 
C1 H11 DH1 sing 101 n n 
C1 H12 DH1 sing 102 n n 
C3 C7 DH1 sing 103 n n 
C3 H31 DH1 sing 104 n n 
C3 H32 DH1 sing 105 n n 
C7 C8 DH1 sing 106 n n 
C7 H71 DH1 sing 107 n n 
C7 H72 DH1 sing 108 n n 
C8 O9 DH1 sing 109 n n 
C8 O10 DH1 doub 110 n n 
O9 HO9 DH1 sing 111 n n 
C6' C1' DH1 doub 112 n y 
C6' H6' DH1 sing 113 n n 
C1' C51 DH1 sing 114 n n 
C51 C5 DH1 sing 115 n n 
C51 H511 DH1 sing 116 n n 
C51 H512 DH1 sing 117 n n 
C5 C6 DH1 doub 118 n y 
C5 C4 DH1 sing 119 n y 
C6 N1 DH1 sing 120 n y 
C6 H6 DH1 sing 121 n n 
N1 C2 DH1 doub 122 n y 
C2 N2 DH1 sing 123 n n 
C2 N3 DH1 sing 124 n y 
N2 HN21 DH1 sing 125 n n 
N2 HN22 DH1 sing 126 n n 
N3 C4 DH1 doub 127 n y 
C4 N4 DH1 sing 128 n n 
N4 HN41 DH1 sing 129 n n 
N4 HN42 DH1 sing 130 n n 
#
_atom_sites.entry_id                     3FS6 
_atom_sites.fract_transf_matrix[1][1]    0.011891 
_atom_sites.fract_transf_matrix[1][2]    0.006865 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01373 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012812 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DH1 A 1 187 187 DH1 DH1 . 
C 3 NDP A 1 188 188 NDP NDP . 
D 4 HOH A 1 189 189 HOH HOH . 
D 4 HOH A 2 190 190 HOH HOH . 
D 4 HOH A 3 191 191 HOH HOH . 
D 4 HOH A 4 192 192 HOH HOH . 
D 4 HOH A 5 193 193 HOH HOH . 
D 4 HOH A 6 194 194 HOH HOH . 
D 4 HOH A 7 195 195 HOH HOH . 
D 4 HOH A 8 196 196 HOH HOH . 
D 4 HOH A 9 197 197 HOH HOH . 
D 4 HOH A 10 198 198 HOH HOH . 
D 4 HOH A 11 199 199 HOH HOH . 
D 4 HOH A 12 200 200 HOH HOH . 
D 4 HOH A 13 201 201 HOH HOH . 
D 4 HOH A 14 202 202 HOH HOH . 
D 4 HOH A 15 203 203 HOH HOH . 
D 4 HOH A 16 204 204 HOH HOH . 
D 4 HOH A 17 205 205 HOH HOH . 
D 4 HOH A 18 206 206 HOH HOH . 
D 4 HOH A 19 207 207 HOH HOH . 
D 4 HOH A 20 208 208 HOH HOH . 
D 4 HOH A 21 209 209 HOH HOH . 
D 4 HOH A 22 210 210 HOH HOH . 
D 4 HOH A 23 211 211 HOH HOH . 
D 4 HOH A 24 212 212 HOH HOH . 
D 4 HOH A 25 213 213 HOH HOH . 
D 4 HOH A 26 214 214 HOH HOH . 
D 4 HOH A 27 215 215 HOH HOH . 
D 4 HOH A 28 216 216 HOH HOH . 
D 4 HOH A 29 217 217 HOH HOH . 
D 4 HOH A 30 218 218 HOH HOH . 
D 4 HOH A 31 219 219 HOH HOH . 
D 4 HOH A 32 220 220 HOH HOH . 
D 4 HOH A 33 221 221 HOH HOH . 
D 4 HOH A 34 222 222 HOH HOH . 
D 4 HOH A 35 223 223 HOH HOH . 
D 4 HOH A 36 224 224 HOH HOH . 
D 4 HOH A 37 225 225 HOH HOH . 
D 4 HOH A 38 226 226 HOH HOH . 
D 4 HOH A 39 227 227 HOH HOH . 
D 4 HOH A 40 228 228 HOH HOH . 
D 4 HOH A 41 229 229 HOH HOH . 
D 4 HOH A 42 230 230 HOH HOH . 
D 4 HOH A 43 231 231 HOH HOH . 
D 4 HOH A 44 232 232 HOH HOH . 
D 4 HOH A 45 233 233 HOH HOH . 
D 4 HOH A 46 234 234 HOH HOH . 
D 4 HOH A 47 235 235 HOH HOH . 
D 4 HOH A 48 236 236 HOH HOH . 
D 4 HOH A 49 237 237 HOH HOH . 
D 4 HOH A 50 238 238 HOH HOH . 
D 4 HOH A 51 239 239 HOH HOH . 
D 4 HOH A 52 240 240 HOH HOH . 
D 4 HOH A 53 241 241 HOH HOH . 
D 4 HOH A 54 242 242 HOH HOH . 
D 4 HOH A 55 243 243 HOH HOH . 
D 4 HOH A 56 244 244 HOH HOH . 
D 4 HOH A 57 245 245 HOH HOH . 
D 4 HOH A 58 246 246 HOH HOH . 
D 4 HOH A 59 247 247 HOH HOH . 
D 4 HOH A 60 248 248 HOH HOH . 
D 4 HOH A 61 249 249 HOH HOH . 
D 4 HOH A 62 250 250 HOH HOH . 
D 4 HOH A 63 251 251 HOH HOH . 
D 4 HOH A 64 252 252 HOH HOH . 
D 4 HOH A 65 253 253 HOH HOH . 
D 4 HOH A 66 254 254 HOH HOH . 
D 4 HOH A 67 255 255 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C16 DH1 . . . B 2 -2.112 17.985 3.486 1 21.93 ? C16 DH1 187 A 1 
HETATM 2 O O1 DH1 . . . B 2 -2.209 17.892 2.062 1 19.14 ? O1 DH1 187 A 1 
HETATM 3 C C2' DH1 . . . B 2 -1.927 16.656 1.586 1 18.49 ? C2' DH1 187 A 1 
HETATM 4 C C3' DH1 . . . B 2 -0.889 15.891 2.131 1 18.48 ? C3' DH1 187 A 1 
HETATM 5 C C4' DH1 . . . B 2 -0.623 14.634 1.605 1 18.4 ? C4' DH1 187 A 1 
HETATM 6 C C5' DH1 . . . B 2 -1.402 14.142 0.567 1 20.95 ? C5' DH1 187 A 1 
HETATM 7 O O5' DH1 . . . B 2 -1.15 12.908 0.056 1 21.78 ? O5' DH1 187 A 1 
HETATM 8 C C52 DH1 . . . B 2 -0.436 13.029 -1.167 1 24.3 ? C52 DH1 187 A 1 
HETATM 9 C C1 DH1 . . . B 2 0.442 11.806 -1.361 1 25.33 ? C1 DH1 187 A 1 
HETATM 10 C C3 DH1 . . . B 2 1.747 12.248 -1.993 1 25.24 ? C3 DH1 187 A 1 
HETATM 11 C C7 DH1 . . . B 2 2.908 11.474 -1.384 1 23.05 ? C7 DH1 187 A 1 
HETATM 12 C C8 DH1 . . . B 2 4.002 12.402 -0.84 1 22.92 ? C8 DH1 187 A 1 
HETATM 13 O O9 DH1 . . . B 2 4.947 11.839 -0.261 1 22.9 ? O9 DH1 187 A 1 
HETATM 14 O O10 DH1 . . . B 2 3.887 13.641 -1.006 1 21.03 ? O10 DH1 187 A 1 
HETATM 15 C C6' DH1 . . . B 2 -2.433 14.913 0.037 1 19.03 ? C6' DH1 187 A 1 
HETATM 16 C C1' DH1 . . . B 2 -2.708 16.18 0.534 1 16.81 ? C1' DH1 187 A 1 
HETATM 17 C C51 DH1 . . . B 2 -3.878 16.959 -0.089 1 14.98 ? C51 DH1 187 A 1 
HETATM 18 C C5 DH1 . . . B 2 -3.514 17.702 -1.38 1 12.06 ? C5 DH1 187 A 1 
HETATM 19 C C6 DH1 . . . B 2 -3.751 17.03 -2.569 1 12.63 ? C6 DH1 187 A 1 
HETATM 20 N N1 DH1 . . . B 2 -3.477 17.626 -3.721 1 11.28 ? N1 DH1 187 A 1 
HETATM 21 C C2 DH1 . . . B 2 -2.987 18.888 -3.786 1 10.8 ? C2 DH1 187 A 1 
HETATM 22 N N2 DH1 . . . B 2 -2.738 19.438 -4.96 1 10.9 ? N2 DH1 187 A 1 
HETATM 23 N N3 DH1 . . . B 2 -2.758 19.589 -2.68 1 9.43 ? N3 DH1 187 A 1 
HETATM 24 C C4 DH1 . . . B 2 -3.005 19.012 -1.484 1 10.76 ? C4 DH1 187 A 1 
HETATM 25 N N4 DH1 . . . B 2 -2.759 19.739 -0.397 1 11.92 ? N4 DH1 187 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           25 
#